Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is vhuU [H]

Identifier: 150399743

GI number: 150399743

Start: 1011036

End: 1011170

Strand: Reverse

Name: vhuU [H]

Synonym: Mevan_0995

Alternate gene names: 150399743

Gene position: 1011170-1011036 (Counterclockwise)

Preceding gene: 150399744

Following gene: 150399742

Centisome position: 58.79

GC content: 33.33

Gene sequence:

>135_bases
ATGGTAGATGAAACAAAATTGAATTTGATCGAAATTGTATTAAGGGCGTATGACCCATGATACTCATGTGCAGCGCACAT
GATAGTAAAGGATGAAAAAGGAAATATCATCCTTGAAGTAGTTAAAGAAGAATAA

Upstream 100 bases:

>100_bases
GATTGTAGCAACGACACACAATGTACCTACAATGGAAAAAGCAATCCAGCAGGCTGCAAGTGTGGTCTTCAAATAATTGA
AGTTCCTCTTGGTGGTAACA

Downstream 100 bases:

>100_bases
TTCTCTAACCGAACCCAATTTGGGAGGCTAGGGAACCTTCATTAGAAGGCCCCATACATTTTAAAAATTTTTAGGGGGTT
GTCATTTGGCAGGAATATTT

Product: methylviologen-reducing hydrogenase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MVDETKLNLIEIVLRAYDPUYSCAAHMIVKDEKGNIILEVVKEE

Sequences:

>Translated_44_residues
MVDETKLNLIEIVLRAYDP*YSCAAHMIVKDEKGNIILEVVKEE
>Mature_44_residues
MVDETKLNLIEIVLRAYDP*YSCAAHMIVKDEKGNIILEVVKEE

Specific function: Unknown

COG id: COG3259

COG function: function code C; Coenzyme F420-reducing hydrogenase, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4916; Mature: 4916

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDETKLNLIEIVLRAYDPYSCAAHMIVKDEKGNIILEVVKEE
CCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MVDETKLNLIEIVLRAYDPYSCAAHMIVKDEKGNIILEVVKEE
CCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA