| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399676
Identifier: 150399676
GI number: 150399676
Start: 945500
End: 946471
Strand: Reverse
Name: 150399676
Synonym: Mevan_0927
Alternate gene names: NA
Gene position: 946471-945500 (Counterclockwise)
Preceding gene: 150399679
Following gene: 150399675
Centisome position: 55.03
GC content: 33.02
Gene sequence:
>972_bases ATGGATAGAGATTTGAGGCCTATTTTTTGGAATGATGAAGAAAAAAAACTTATACTAGTAGATCAGCGAAAACTTCCAAA TAAGCTTGAGTATTTTGAATGTAAAACTTATACTGATGTATGTTATGCAATAAAAGATATGGTTGTAAGAGGGGCTCCTG CAATTGGTGTTTCCGCAGCATATGGGTTGGCATTAGCGGAATTAAACGGAAATAACATTGAAAATGCATATATGGAATTG AAAGAAACAAGGCCAACTGCGGTAAATTTATTTTGGGCCCTTGATAAGGCTATGAATGCAAAAATAAATGGAAAATCGAT TTTAGATGAAGCTAAACTAATCCATGACGAAGATGTTGAATTATGCAAAAAAATTGGAAAAATCGGTGAAACGTTAATTA AAGACGGCGATACAATTTTAACACATTGCAATGCGGGAGCACTAGCAACATCAGCATACGGAACTGCATTAAGTATTATT AGATTTGCACATTATTCCGGTAAAAAAATAAATGTTATATCTGATGAAACAAGACCAAGATTACAGGGTGCGAAATTGAC CTGTTTTGAACTAAATTATGAAAAAATCCCTGTAAAAGCAATATGTGATAATACTGCAGGATATTTGATGAGTAAAGGTA TGATTGATAAAATAATTGTTGGTGCAGACCGGATTCTTTCTGACTATCATGTTTTTAACAAAATTGGAACTTATTCGCTA GCAATACTTGCAAAATATCACAATGTTCCATTTTATGTTGCAGCACCCTATTCTACGTTTGACTTTAAAAGTAAGCTTGT AGATATTGTAGTTGAAGAACGAGATGATGTAGAAGTAACCTATATTGATGGCGTAAGAGTTGTTTCAGAAGGAGTTTCTG CATACAACTTTGCATTTGACTGTACGCCTCCAGAATTAATTACTGGAATAATTACTGAAAAAGAGATAATTTATCCAAAT TTGGGAAAATAA
Upstream 100 bases:
>100_bases TATTAATACAAATCGTTTGATTGTACCGTATAAATTAAATACTGTTTTTACAGTTACTTATTTTTAGTACCTTCGATTTA TGTTGGAGTTGGTGAGATAT
Downstream 100 bases:
>100_bases TTAGTAAATATTTTGTAAATATGCTAATTCATAAATAAATTTATAAATTTATGGACAGGATTTCTCCTGTCCGAATGGAT TTTTGAATGTTTTCAGCTTT
Product: aIF-2BI family translation initiation factor
Products: NA
Alternate protein names: M1Pi; MTR-1-P isomerase; MTNA-like protein; aMTNA; S-methyl-5-thioribose-1-phosphate isomerase [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MDRDLRPIFWNDEEKKLILVDQRKLPNKLEYFECKTYTDVCYAIKDMVVRGAPAIGVSAAYGLALAELNGNNIENAYMEL KETRPTAVNLFWALDKAMNAKINGKSILDEAKLIHDEDVELCKKIGKIGETLIKDGDTILTHCNAGALATSAYGTALSII RFAHYSGKKINVISDETRPRLQGAKLTCFELNYEKIPVKAICDNTAGYLMSKGMIDKIIVGADRILSDYHVFNKIGTYSL AILAKYHNVPFYVAAPYSTFDFKSKLVDIVVEERDDVEVTYIDGVRVVSEGVSAYNFAFDCTPPELITGIITEKEIIYPN LGK
Sequences:
>Translated_323_residues MDRDLRPIFWNDEEKKLILVDQRKLPNKLEYFECKTYTDVCYAIKDMVVRGAPAIGVSAAYGLALAELNGNNIENAYMEL KETRPTAVNLFWALDKAMNAKINGKSILDEAKLIHDEDVELCKKIGKIGETLIKDGDTILTHCNAGALATSAYGTALSII RFAHYSGKKINVISDETRPRLQGAKLTCFELNYEKIPVKAICDNTAGYLMSKGMIDKIIVGADRILSDYHVFNKIGTYSL AILAKYHNVPFYVAAPYSTFDFKSKLVDIVVEERDDVEVTYIDGVRVVSEGVSAYNFAFDCTPPELITGIITEKEIIYPN LGK >Mature_323_residues MDRDLRPIFWNDEEKKLILVDQRKLPNKLEYFECKTYTDVCYAIKDMVVRGAPAIGVSAAYGLALAELNGNNIENAYMEL KETRPTAVNLFWALDKAMNAKINGKSILDEAKLIHDEDVELCKKIGKIGETLIKDGDTILTHCNAGALATSAYGTALSII RFAHYSGKKINVISDETRPRLQGAKLTCFELNYEKIPVKAICDNTAGYLMSKGMIDKIIVGADRILSDYHVFNKIGTYSL AILAKYHNVPFYVAAPYSTFDFKSKLVDIVVEERDDVEVTYIDGVRVVSEGVSAYNFAFDCTPPELITGIITEKEIIYPN LGK
Specific function: Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P) [H]
COG id: COG0182
COG function: function code J; Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=336, Percent_Identity=37.5, Blast_Score=199, Evalue=2e-51, Organism=Homo sapiens, GI23943880, Length=323, Percent_Identity=34.3653250773994, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI4503503, Length=200, Percent_Identity=32.5, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI78000158, Length=263, Percent_Identity=24.7148288973384, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI187607323, Length=263, Percent_Identity=24.7148288973384, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI78000156, Length=263, Percent_Identity=24.7148288973384, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17557462, Length=318, Percent_Identity=33.9622641509434, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17557123, Length=206, Percent_Identity=30.0970873786408, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6325375, Length=381, Percent_Identity=32.8083989501312, Blast_Score=136, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6322878, Length=264, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI21357667, Length=340, Percent_Identity=36.4705882352941, Blast_Score=200, Evalue=9e-52, Organism=Drosophila melanogaster, GI24651647, Length=340, Percent_Identity=36.4705882352941, Blast_Score=200, Evalue=9e-52, Organism=Drosophila melanogaster, GI281364091, Length=258, Percent_Identity=26.7441860465116, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24659399, Length=258, Percent_Identity=26.7441860465116, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24659407, Length=258, Percent_Identity=26.7441860465116, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI19922816, Length=258, Percent_Identity=26.7441860465116, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000649 - InterPro: IPR005251 - InterPro: IPR011559 [H]
Pfam domain/function: PF01008 IF-2B [H]
EC number: =5.3.1.23 [H]
Molecular weight: Translated: 36049; Mature: 36049
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRDLRPIFWNDEEKKLILVDQRKLPNKLEYFECKTYTDVCYAIKDMVVRGAPAIGVSAA CCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHH YGLALAELNGNNIENAYMELKETRPTAVNLFWALDKAMNAKINGKSILDEAKLIHDEDVE HCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHCCCCHHH LCKKIGKIGETLIKDGDTILTHCNAGALATSAYGTALSIIRFAHYSGKKINVISDETRPR HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC LQGAKLTCFELNYEKIPVKAICDNTAGYLMSKGMIDKIIVGADRILSDYHVFNKIGTYSL CCCCEEEEEECCCCCCCHHEECCCCHHHHHHCCCHHHHHHCHHHHHHHHHHHHHCCHHEE AILAKYHNVPFYVAAPYSTFDFKSKLVDIVVEERDDVEVTYIDGVRVVSEGVSAYNFAFD EEEEEECCCCEEEECCCCCHHHHHHHHHHEEECCCCEEEEEECCCHHHHCCCCCEEEEEE CTPPELITGIITEKEIIYPNLGK CCCHHHHHHHHCCCEEECCCCCC >Mature Secondary Structure MDRDLRPIFWNDEEKKLILVDQRKLPNKLEYFECKTYTDVCYAIKDMVVRGAPAIGVSAA CCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHH YGLALAELNGNNIENAYMELKETRPTAVNLFWALDKAMNAKINGKSILDEAKLIHDEDVE HCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHCCCCHHH LCKKIGKIGETLIKDGDTILTHCNAGALATSAYGTALSIIRFAHYSGKKINVISDETRPR HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC LQGAKLTCFELNYEKIPVKAICDNTAGYLMSKGMIDKIIVGADRILSDYHVFNKIGTYSL CCCCEEEEEECCCCCCCHHEECCCCHHHHHHCCCHHHHHHCHHHHHHHHHHHHHCCHHEE AILAKYHNVPFYVAAPYSTFDFKSKLVDIVVEERDDVEVTYIDGVRVVSEGVSAYNFAFD EEEEEECCCCEEEECCCCCHHHHHHHHHHEEECCCCEEEEEECCCHHHHCCCCCEEEEEE CTPPELITGIITEKEIIYPNLGK CCCHHHHHHHHCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]