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The map label for this gene is ttdB [C]

Identifier: 150399612

GI number: 150399612

Start: 886555

End: 887127

Strand: Reverse

Name: ttdB [C]

Synonym: Mevan_0862

Alternate gene names: 150399612

Gene position: 887127-886555 (Counterclockwise)

Preceding gene: 150399615

Following gene: 150399606

Centisome position: 51.58

GC content: 34.73

Gene sequence:

>573_bases
TTGAATTTAAATGTCCCGATTTCAAAAGAAGACGTTAAAAAGTTAAAAGTAGGGGATATCGTTTATTTAACCGGTAACCT
CTGTACTGGAAGAGATGAAGCTCACTTGATAACTATTGAAGAAAAAAAAGCACCAATAAACCTTGAAAATGGCGTAATTT
ACCATGCCGGCCCGATAATGAAGCAAGAAAATGGTATTTGGAAATGCGTTGCAATTGGGCCTACAACCTCTGCAAGAATG
AACAATATCGAAGAAGACTTTATAAAAATTACAAATATTTCTGCAATAGTTGGAAAAGGAGGAATGAATAAAGAGTTATT
GAGAACTTTTAAGGAGTTAGGGGTAGTTTATCTTGCAGCTCCAGGTGGCTGTGCAGCACTTTTGGCAAATTGTATAAAAG
AAGTAAAAAATGTTTACCATCTAGACTTAGGAATGCCTGAAGCATTTTGGGAACTAAAAGTTGAAAATTTTGGTCCACTA
ATTGTTGCAATGGATTCACACGAAAATAGCCTTTATTTTGAAGTCGAAAAAAAGGTTCAGGAAAATTTAGATTCATTAAA
GCGGAAGCTCTAA

Upstream 100 bases:

>100_bases
AGAGATGATATTCCAAACTTCATGAGAATCTCCCCGCTTTAGCTATTAATATAATAAAAACATTTAATGTATTTAATAAT
ATTTTTATTCTGGTGGTAGT

Downstream 100 bases:

>100_bases
CCTTTTAGTTTTTTAAACTTATTTTTTAAATATTAATTTAGATTTATAACTTTAAATAATTTATAAATCTAAATTAATAA
ATAAATTTTTATAAAAATAA

Product: tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta

Products: NA

Alternate protein names: Fumarase [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNLNVPISKEDVKKLKVGDIVYLTGNLCTGRDEAHLITIEEKKAPINLENGVIYHAGPIMKQENGIWKCVAIGPTTSARM
NNIEEDFIKITNISAIVGKGGMNKELLRTFKELGVVYLAAPGGCAALLANCIKEVKNVYHLDLGMPEAFWELKVENFGPL
IVAMDSHENSLYFEVEKKVQENLDSLKRKL

Sequences:

>Translated_190_residues
MNLNVPISKEDVKKLKVGDIVYLTGNLCTGRDEAHLITIEEKKAPINLENGVIYHAGPIMKQENGIWKCVAIGPTTSARM
NNIEEDFIKITNISAIVGKGGMNKELLRTFKELGVVYLAAPGGCAALLANCIKEVKNVYHLDLGMPEAFWELKVENFGPL
IVAMDSHENSLYFEVEKKVQENLDSLKRKL
>Mature_190_residues
MNLNVPISKEDVKKLKVGDIVYLTGNLCTGRDEAHLITIEEKKAPINLENGVIYHAGPIMKQENGIWKCVAIGPTTSARM
NNIEEDFIKITNISAIVGKGGMNKELLRTFKELGVVYLAAPGGCAALLANCIKEVKNVYHLDLGMPEAFWELKVENFGPL
IVAMDSHENSLYFEVEKKVQENLDSLKRKL

Specific function: Unknown

COG id: COG1838

COG function: function code C; Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789443, Length=188, Percent_Identity=43.0851063829787, Blast_Score=160, Evalue=4e-41,
Organism=Escherichia coli, GI1787897, Length=183, Percent_Identity=28.4153005464481, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1790564, Length=185, Percent_Identity=29.7297297297297, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004647 [H]

Pfam domain/function: PF05683 Fumerase_C [H]

EC number: =4.2.1.2 [H]

Molecular weight: Translated: 21099; Mature: 21099

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNVPISKEDVKKLKVGDIVYLTGNLCTGRDEAHLITIEEKKAPINLENGVIYHAGPIM
CCCCCCCCHHHHHHEECCEEEEEECCEECCCCCEEEEEEECCCCCEECCCCEEEECCCCE
KQENGIWKCVAIGPTTSARMNNIEEDFIKITNISAIVGKGGMNKELLRTFKELGVVYLAA
ECCCCEEEEEEECCCCCHHHCCCHHHHEEHCCCEEEECCCCCCHHHHHHHHHCCEEEEEC
PGGCAALLANCIKEVKNVYHLDLGMPEAFWELKVENFGPLIVAMDSHENSLYFEVEKKVQ
CCCHHHHHHHHHHHHHHHEEECCCCCCHHEEEEECCCCCEEEEEECCCCEEEEEEHHHHH
ENLDSLKRKL
HHHHHHHHCC
>Mature Secondary Structure
MNLNVPISKEDVKKLKVGDIVYLTGNLCTGRDEAHLITIEEKKAPINLENGVIYHAGPIM
CCCCCCCCHHHHHHEECCEEEEEECCEECCCCCEEEEEEECCCCCEECCCCEEEECCCCE
KQENGIWKCVAIGPTTSARMNNIEEDFIKITNISAIVGKGGMNKELLRTFKELGVVYLAA
ECCCCEEEEEEECCCCCHHHCCCHHHHEEHCCCEEEECCCCCCHHHHHHHHHCCEEEEEC
PGGCAALLANCIKEVKNVYHLDLGMPEAFWELKVENFGPLIVAMDSHENSLYFEVEKKVQ
CCCHHHHHHHHHHHHHHHEEECCCCCCHHEEEEECCCCCEEEEEECCCCEEEEEEHHHHH
ENLDSLKRKL
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]