Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399586

Identifier: 150399586

GI number: 150399586

Start: 864369

End: 865391

Strand: Reverse

Name: 150399586

Synonym: Mevan_0835

Alternate gene names: NA

Gene position: 865391-864369 (Counterclockwise)

Preceding gene: 150399587

Following gene: 150399585

Centisome position: 50.31

GC content: 27.76

Gene sequence:

>1023_bases
ATGAGCAAAATTAAGTCTAAATTTATAAAAAATGCCTTTTTTTACGGTATTGGAATCTCCATAATTTCATTTATAATTTA
CAAAATAGGAATCTTTGAAGTTTACAACGTCTTAAAGTCTGCAGATATAAAAATTTACCTGTTTGCAGTTTTAATATATC
TTTTAACCCTTTTCGCAATTTCAGTTCGTTGGAATTATCTTTTGGGGCTAAATGGATATCATGCAGGATTTAAAAATCTG
GTTCTTTTAATTACCATGGGACAATTTATAAATAACGTAACTCCATCAATGAAAGGTGGCAGTGAACCATTTCGTGCATA
TTATCTTTCAAAGCTTGAGAACATACCCTATCACGTTTCATTTTCGACAGTAGTTATAGAACGGCTTTTGGATAGTGTAG
TATTTCTAATGCTCACGTTTTTTGTTATAATTTATTTTACAATAAAAGGAATGATTTACACAGGTTTTTTTATAATTGCA
TGGATATTAGTCGTTTTTGTTACTTTTGGAATACTATATATTGCAATGCATAAGAAGTTGGCATTTAAAATTACATTACG
CATTGCAAAAATCGTTACAAAGTTTTCTTCAAAAAAGATAGATGAAAAAAAAATAAATGATACAATCAAAAAATTTCAAG
AGAGTATGCTTTTTTTTAAAGAACGAAAAAAAGGAATGATAAATTCGTTAATGTTATCTATTATTTGGTGGTTTTTAGAT
ATTTTAAGAATATATACACTTTTTATAGCCATAAATACAAATTTAAATTTTATTACTGTTTCATCAACATATCTTGTAGC
ACTGCTTGTTGGAGTTTTACCAACATTACCTGGGGGACTTGGAACAAGTGACACTGCAATGATTGCAATGTATTCATTTT
TTAATATCCCCTATTCAAAAGCTGCTGCTGGAACGTTACTTGATAGATCTATATCGTATATTTTTGTTACAATTGTAGGT
TCAGTTGCATTTAAAATAATAAAAAAGAAATCTAAAAATCAAAATTATGAAATAGAATGCTAG

Upstream 100 bases:

>100_bases
ACACTAAGATATAGTCAAAATCGAACTAATTAACGGCATCAAAAGAATAACTATAAAAGATTAAAAAAATAACCAATTAT
TTTATTTTTTCGGGGATTGA

Downstream 100 bases:

>100_bases
TTAGATTAAGGTGAAAAAAATGAACAACTTTAACATGATCATTGGTAGAATTGTGCGGTCAATTGAAGCATTTAAAGGCT
CTAAGCCAGTAATAAATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSKIKSKFIKNAFFYGIGISIISFIIYKIGIFEVYNVLKSADIKIYLFAVLIYLLTLFAISVRWNYLLGLNGYHAGFKNL
VLLITMGQFINNVTPSMKGGSEPFRAYYLSKLENIPYHVSFSTVVIERLLDSVVFLMLTFFVIIYFTIKGMIYTGFFIIA
WILVVFVTFGILYIAMHKKLAFKITLRIAKIVTKFSSKKIDEKKINDTIKKFQESMLFFKERKKGMINSLMLSIIWWFLD
ILRIYTLFIAINTNLNFITVSSTYLVALLVGVLPTLPGGLGTSDTAMIAMYSFFNIPYSKAAAGTLLDRSISYIFVTIVG
SVAFKIIKKKSKNQNYEIEC

Sequences:

>Translated_340_residues
MSKIKSKFIKNAFFYGIGISIISFIIYKIGIFEVYNVLKSADIKIYLFAVLIYLLTLFAISVRWNYLLGLNGYHAGFKNL
VLLITMGQFINNVTPSMKGGSEPFRAYYLSKLENIPYHVSFSTVVIERLLDSVVFLMLTFFVIIYFTIKGMIYTGFFIIA
WILVVFVTFGILYIAMHKKLAFKITLRIAKIVTKFSSKKIDEKKINDTIKKFQESMLFFKERKKGMINSLMLSIIWWFLD
ILRIYTLFIAINTNLNFITVSSTYLVALLVGVLPTLPGGLGTSDTAMIAMYSFFNIPYSKAAAGTLLDRSISYIFVTIVG
SVAFKIIKKKSKNQNYEIEC
>Mature_339_residues
SKIKSKFIKNAFFYGIGISIISFIIYKIGIFEVYNVLKSADIKIYLFAVLIYLLTLFAISVRWNYLLGLNGYHAGFKNLV
LLITMGQFINNVTPSMKGGSEPFRAYYLSKLENIPYHVSFSTVVIERLLDSVVFLMLTFFVIIYFTIKGMIYTGFFIIAW
ILVVFVTFGILYIAMHKKLAFKITLRIAKIVTKFSSKKIDEKKINDTIKKFQESMLFFKERKKGMINSLMLSIIWWFLDI
LRIYTLFIAINTNLNFITVSSTYLVALLVGVLPTLPGGLGTSDTAMIAMYSFFNIPYSKAAAGTLLDRSISYIFVTIVGS
VAFKIIKKKSKNQNYEIEC

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791
- InterPro:   IPR005242 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 38872; Mature: 38741

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIKSKFIKNAFFYGIGISIISFIIYKIGIFEVYNVLKSADIKIYLFAVLIYLLTLFAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SVRWNYLLGLNGYHAGFKNLVLLITMGQFINNVTPSMKGGSEPFRAYYLSKLENIPYHVS
HHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEH
FSTVVIERLLDSVVFLMLTFFVIIYFTIKGMIYTGFFIIAWILVVFVTFGILYIAMHKKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFKITLRIAKIVTKFSSKKIDEKKINDTIKKFQESMLFFKERKKGMINSLMLSIIWWFLD
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILRIYTLFIAINTNLNFITVSSTYLVALLVGVLPTLPGGLGTSDTAMIAMYSFFNIPYSK
HHHHHHHHHHEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH
AAAGTLLDRSISYIFVTIVGSVAFKIIKKKSKNQNYEIEC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKIKSKFIKNAFFYGIGISIISFIIYKIGIFEVYNVLKSADIKIYLFAVLIYLLTLFAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]