Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150399585

Identifier: 150399585

GI number: 150399585

Start: 863930

End: 864349

Strand: Reverse

Name: 150399585

Synonym: Mevan_0834

Alternate gene names: NA

Gene position: 864349-863930 (Counterclockwise)

Preceding gene: 150399586

Following gene: 150399583

Centisome position: 50.25

GC content: 31.67

Gene sequence:

>420_bases
ATGAACAACTTTAACATGATCATTGGTAGAATTGTGCGGTCAATTGAAGCATTTAAAGGCTCTAAGCCAGTAATAAATAA
GGATGAAGTTCTTGCAGTAAGGAGTATATGTAAGGATAAAAAAATTGATGAATATCCTTCAATAAAAGAATATCTAATGG
ATAAATTAGTTGAAAACGATTTTGAAATTGTAAATGATGAGGAAATTTTAGAAATGGTTATACGGATAAACGAGGCACTT
GGGACAAGTGATACATATACTGATGAATTTGCATTTGATGGCGTAAAAAGTACTTTTGAAGCTATGGGTTGTGTTTGTGA
CTATGCCGTTGGAAAAAAAGGAAGTACTTATGTTGGAATAAGTATGTGGTTTGAAAAGGAGCTAAAGGAACCAAAATTTG
TGGAAGTAATTTGTGTATAA

Upstream 100 bases:

>100_bases
TTTGTTACAATTGTAGGTTCAGTTGCATTTAAAATAATAAAAAAGAAATCTAAAAATCAAAATTATGAAATAGAATGCTA
GTTAGATTAAGGTGAAAAAA

Downstream 100 bases:

>100_bases
CTTTGAAATAAATAAAAATAAATAAAATAATAAATGTAATAAGGCAATAATCCAAAAATTTATTTTTTATTTTTATTTGA
TTTAACTTCTTTAACCGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNNFNMIIGRIVRSIEAFKGSKPVINKDEVLAVRSICKDKKIDEYPSIKEYLMDKLVENDFEIVNDEEILEMVIRINEAL
GTSDTYTDEFAFDGVKSTFEAMGCVCDYAVGKKGSTYVGISMWFEKELKEPKFVEVICV

Sequences:

>Translated_139_residues
MNNFNMIIGRIVRSIEAFKGSKPVINKDEVLAVRSICKDKKIDEYPSIKEYLMDKLVENDFEIVNDEEILEMVIRINEAL
GTSDTYTDEFAFDGVKSTFEAMGCVCDYAVGKKGSTYVGISMWFEKELKEPKFVEVICV
>Mature_139_residues
MNNFNMIIGRIVRSIEAFKGSKPVINKDEVLAVRSICKDKKIDEYPSIKEYLMDKLVENDFEIVNDEEILEMVIRINEAL
GTSDTYTDEFAFDGVKSTFEAMGCVCDYAVGKKGSTYVGISMWFEKELKEPKFVEVICV

Specific function: Unknown

COG id: COG4077

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014515 [H]

Pfam domain/function: PF09893 DUF2120 [H]

EC number: NA

Molecular weight: Translated: 15859; Mature: 15859

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFNMIIGRIVRSIEAFKGSKPVINKDEVLAVRSICKDKKIDEYPSIKEYLMDKLVEND
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
FEIVNDEEILEMVIRINEALGTSDTYTDEFAFDGVKSTFEAMGCVCDYAVGKKGSTYVGI
CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH
SMWFEKELKEPKFVEVICV
HHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure
MNNFNMIIGRIVRSIEAFKGSKPVINKDEVLAVRSICKDKKIDEYPSIKEYLMDKLVEND
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
FEIVNDEEILEMVIRINEALGTSDTYTDEFAFDGVKSTFEAMGCVCDYAVGKKGSTYVGI
CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH
SMWFEKELKEPKFVEVICV
HHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]