| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is yfbQ [C]
Identifier: 150399458
GI number: 150399458
Start: 757630
End: 758931
Strand: Reverse
Name: yfbQ [C]
Synonym: Mevan_0707
Alternate gene names: 150399458
Gene position: 758931-757630 (Counterclockwise)
Preceding gene: 150399485
Following gene: 150399457
Centisome position: 44.12
GC content: 32.87
Gene sequence:
>1302_bases ATGAGAACAGATATCGTAAGTTCGGGAGTTGGAGAATTGTCATATGAAATCAGGGAAATTGTGAAGGTGGCGAAAAGGGC CGAAAATTCGGGATTGGAAATTGTCTGGGAAAATATTGGGGATCCAATTGCCAAGGGGGAAAAGCTTCCACACTGGATAA AGGAAATTGTCGCAGAAACTGCAATGGAAGATAGTTCATACGGGTACTGCCCTACAAAAGGCCTTCTTGAAACACGTGAA TTTTTAGCAGATTTAAACAATAGTAGAAATGGAGCGAATATATCTTCTGAAGATATTTTATTTTTTAACGGCCTTGGAGA TGCCATAACAAATATATATGGACTTTTAAGGAAAGAATGTCGTGTAATCGGGCCAAAACCTGCTTATTCAACACATTCTT CTGCAGAAGGCCTTCATGCAAACTGTCATCCGGTAATGTATGAGTTAAATAAAGATGACAACTGGAATCCGGATATTGAA GACCTTACTAATAAAATAAAATATAATCCTTCAATTGCAGGAATTTTACTTATAAATCCAGGAAATCCAACTGGTGCAGT TTATTCGAAAAAAGTACTGAGTAATATCGTTGATATTGCAAATGAATATGATTTATTTATTTTAACTGACGAAATATATT CAAATATTGTTTATAACGGTAAAAAACATAATTATTTATCTGAAGTAATTGATGACGTTTCAGGAATTTCTTTAAAAGGC ATTTCAAAAGATCTTCCGTGGCCAGGTTCACGATGCGGTTGGGCAGAGTTTTATAATGTTGAAAAAGACCCGATTTTCCA TAAATACGTTGAAAACATATGTAAGTTTAAAATGATTGAAGTATGTTCAACAACGCTCCCTCAAAAAGTAATTCCAAGAG TAATGTCCGATAACAGGTATGGTAAATATCTAGAAGAGCGAAAAAAACACTATGAATATGCTTCAAACTATGTTTACGAT AGAATGAAAAAAATCGAAGGAGTTACGGTAAATAAAACTAACGGTGCATTTTACAACACATTAGTTTTAGAGAAAGAATA TTTAAATGAAGATCAATCATTGAAAATTGAAGATAATGGACTTAAAAATTATATTGAAACTATTTCAAAGGGAATCCCAA ATGACAAGAGGTTCGTATACTACCTTCTTGGTTCAACAGGAATTTGCACTGTTCCTTTAACATCCTTTTGTTCTGAACAC AATGGCCTTAGATTTACACTTCTTGAAAGAAATATGGAAATTATGAATAACACATTTGAGATAATGGCTGAAAAAATTGA AGAATATATTTTAAGTAATTAA
Upstream 100 bases:
>100_bases ATACGAAGTATTAGAATCAAAATTTAAAAAAATGTAAAACACTTAAAAACAGTTAAAAACACTTAAAATTCAAGTTTTAA CCCAGTTGGAGGTGGAAGCA
Downstream 100 bases:
>100_bases TTTTACTATCTTAATTTTAATATTCTTTTAATGTTATTTTTAAACGTTATTTTGTAAATGCTATTTTTTTTAACTCCACC TAATCCCTTTCCACTAGCTA
Product: aminotransferase
Products: oxaloacetate; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MRTDIVSSGVGELSYEIREIVKVAKRAENSGLEIVWENIGDPIAKGEKLPHWIKEIVAETAMEDSSYGYCPTKGLLETRE FLADLNNSRNGANISSEDILFFNGLGDAITNIYGLLRKECRVIGPKPAYSTHSSAEGLHANCHPVMYELNKDDNWNPDIE DLTNKIKYNPSIAGILLINPGNPTGAVYSKKVLSNIVDIANEYDLFILTDEIYSNIVYNGKKHNYLSEVIDDVSGISLKG ISKDLPWPGSRCGWAEFYNVEKDPIFHKYVENICKFKMIEVCSTTLPQKVIPRVMSDNRYGKYLEERKKHYEYASNYVYD RMKKIEGVTVNKTNGAFYNTLVLEKEYLNEDQSLKIEDNGLKNYIETISKGIPNDKRFVYYLLGSTGICTVPLTSFCSEH NGLRFTLLERNMEIMNNTFEIMAEKIEEYILSN
Sequences:
>Translated_433_residues MRTDIVSSGVGELSYEIREIVKVAKRAENSGLEIVWENIGDPIAKGEKLPHWIKEIVAETAMEDSSYGYCPTKGLLETRE FLADLNNSRNGANISSEDILFFNGLGDAITNIYGLLRKECRVIGPKPAYSTHSSAEGLHANCHPVMYELNKDDNWNPDIE DLTNKIKYNPSIAGILLINPGNPTGAVYSKKVLSNIVDIANEYDLFILTDEIYSNIVYNGKKHNYLSEVIDDVSGISLKG ISKDLPWPGSRCGWAEFYNVEKDPIFHKYVENICKFKMIEVCSTTLPQKVIPRVMSDNRYGKYLEERKKHYEYASNYVYD RMKKIEGVTVNKTNGAFYNTLVLEKEYLNEDQSLKIEDNGLKNYIETISKGIPNDKRFVYYLLGSTGICTVPLTSFCSEH NGLRFTLLERNMEIMNNTFEIMAEKIEEYILSN >Mature_433_residues MRTDIVSSGVGELSYEIREIVKVAKRAENSGLEIVWENIGDPIAKGEKLPHWIKEIVAETAMEDSSYGYCPTKGLLETRE FLADLNNSRNGANISSEDILFFNGLGDAITNIYGLLRKECRVIGPKPAYSTHSSAEGLHANCHPVMYELNKDDNWNPDIE DLTNKIKYNPSIAGILLINPGNPTGAVYSKKVLSNIVDIANEYDLFILTDEIYSNIVYNGKKHNYLSEVIDDVSGISLKG ISKDLPWPGSRCGWAEFYNVEKDPIFHKYVENICKFKMIEVCSTTLPQKVIPRVMSDNRYGKYLEERKKHYEYASNYVYD RMKKIEGVTVNKTNGAFYNTLVLEKEYLNEDQSLKIEDNGLKNYIETISKGIPNDKRFVYYLLGSTGICTVPLTSFCSEH NGLRFTLLERNMEIMNNTFEIMAEKIEEYILSN
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4507369, Length=384, Percent_Identity=24.21875, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI4885351, Length=461, Percent_Identity=21.6919739696312, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI19263340, Length=455, Percent_Identity=20.8791208791209, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI215599424, Length=375, Percent_Identity=21.8666666666667, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1788627, Length=357, Percent_Identity=29.4117647058824, Blast_Score=149, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17567663, Length=348, Percent_Identity=25.2873563218391, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71981209, Length=440, Percent_Identity=24.3181818181818, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71981215, Length=289, Percent_Identity=24.9134948096886, Blast_Score=71, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6320317, Length=363, Percent_Identity=29.2011019283747, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323118, Length=390, Percent_Identity=24.6153846153846, Blast_Score=102, Evalue=1e-22, Organism=Drosophila melanogaster, GI18859735, Length=344, Percent_Identity=26.1627906976744, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI45551451, Length=455, Percent_Identity=25.0549450549451, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24641770, Length=455, Percent_Identity=25.0549450549451, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24641760, Length=455, Percent_Identity=25.0549450549451, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24641768, Length=455, Percent_Identity=25.0549450549451, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24641766, Length=455, Percent_Identity=25.0549450549451, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24641764, Length=455, Percent_Identity=25.0549450549451, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: 2.6.1.1
Molecular weight: Translated: 49234; Mature: 49234
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTDIVSSGVGELSYEIREIVKVAKRAENSGLEIVWENIGDPIAKGEKLPHWIKEIVAET CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHCCCHHHCCCCCHHHHHHHHHHH AMEDSSYGYCPTKGLLETREFLADLNNSRNGANISSEDILFFNGLGDAITNIYGLLRKEC HHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHH RVIGPKPAYSTHSSAEGLHANCHPVMYELNKDDNWNPDIEDLTNKIKYNPSIAGILLINP HCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEECC GNPTGAVYSKKVLSNIVDIANEYDLFILTDEIYSNIVYNGKKHNYLSEVIDDVSGISLKG CCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCEECC ISKDLPWPGSRCGWAEFYNVEKDPIFHKYVENICKFKMIEVCSTTLPQKVIPRVMSDNRY CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCH GKYLEERKKHYEYASNYVYDRMKKIEGVTVNKTNGAFYNTLVLEKEYLNEDQSLKIEDNG HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEHHEEEEHHHCCCCCCEEEECCH LKNYIETISKGIPNDKRFVYYLLGSTGICTVPLTSFCSEHNGLRFTLLERNMEIMNNTFE HHHHHHHHHHCCCCCCEEEEEEECCCCEEECCHHHHHCCCCCCEEEEECCCHHHHHHHHH IMAEKIEEYILSN HHHHHHHHHHCCC >Mature Secondary Structure MRTDIVSSGVGELSYEIREIVKVAKRAENSGLEIVWENIGDPIAKGEKLPHWIKEIVAET CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHCCCHHHCCCCCHHHHHHHHHHH AMEDSSYGYCPTKGLLETREFLADLNNSRNGANISSEDILFFNGLGDAITNIYGLLRKEC HHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHH RVIGPKPAYSTHSSAEGLHANCHPVMYELNKDDNWNPDIEDLTNKIKYNPSIAGILLINP HCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEECC GNPTGAVYSKKVLSNIVDIANEYDLFILTDEIYSNIVYNGKKHNYLSEVIDDVSGISLKG CCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHCCCEECC ISKDLPWPGSRCGWAEFYNVEKDPIFHKYVENICKFKMIEVCSTTLPQKVIPRVMSDNRY CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCH GKYLEERKKHYEYASNYVYDRMKKIEGVTVNKTNGAFYNTLVLEKEYLNEDQSLKIEDNG HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEHHEEEEHHHCCCCCCEEEECCH LKNYIETISKGIPNDKRFVYYLLGSTGICTVPLTSFCSEHNGLRFTLLERNMEIMNNTFE HHHHHHHHHHCCCCCCEEEEEEECCCCEEECCHHHHHCCCCCCEEEEECCCHHHHHHHHH IMAEKIEEYILSN HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate; 2-oxoglutarate
Specific reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]