Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is yleA [C]

Identifier: 150399412

GI number: 150399412

Start: 710343

End: 711659

Strand: Reverse

Name: yleA [C]

Synonym: Mevan_0661

Alternate gene names: 150399412

Gene position: 711659-710343 (Counterclockwise)

Preceding gene: 150399413

Following gene: 150399411

Centisome position: 41.37

GC content: 30.9

Gene sequence:

>1317_bases
ATGAAAGTTATAATATATTCAAAGGACATATATTCTTACGGTGCAATGCTTATTTCAGGAATTTTAAAGGAAAAACACAA
CTACGATGTAAAACTTGTTCGAAATTTATCTGAAAACAATCTTTTTTTAAATTCTGATGTTGTTATATTTAGCCTTTATT
CAACATTGAATATTTTGGACGAAAACATAAAAAATACGATAGAATTAATAAAAAAGTCTGGAAAAACTAGGGTTTATGTT
GCAGGGCCAGTTTCTGCTTATCCTGAGATTATATTAAATGAATTAAACTTAGATGGCGTAATTTTAGGGGAAGGTGAACT
TACAACCCCTGAAATTATTTTAGGAGGTAAAAATGGCCTTGCGTATTTTAAAAACGATGAAATTATCAAAAATAATGTAG
AAAAAAAGCCAGAACTCGATTTTTCAAAAATATATATTCCAAAAGATATTGAAAAACAGACAGTAAGAGGGGCAAATATC
TATATGGAAACGCATAGGGGATGTCTTGGACACTGCACGTTTTGTCAGGTTCCTGAATTTTTTGGGCGAGATATAAGAAG
TAAACCTTTAGAATTAATATTAAATGAAGTAAAAGCACTTAAAAGACGAGGGGTAAATAGAATTGCAATAAGTGGGGGCA
CTGGAAGCCTTTATAATTTTAAAAATTCTTTAAATCGGGATAATTTTATAGAAATGGTAAAATCGGTTTCAGAAATTATT
GGAAAAGAAAATTTATCCATTCCAGATATGAGGGTAGATTATATCGATGAAGAAATACTTTGTGCAATCAGGGATTATTC
AATAGGATGGGTTTTTTATGGGATTGAGAGTGGGAGTAACGAACTCCTTAAAAAAATGAAAAAAGGAACAAATACTGCCA
AAAACTTAAGAGCAATAAAAACTGCAAAAGAATGTGGAGTAAAAGTTGCAGGAAGCTTTATTGTTGGCCATCCTGATGAA
TCAGAGTATGATTACCTACTTACTAAGGATTTTATCGTAGATGCGGAGCTTGATGATATATTTATAAGTGCTGCAGAACC
AATTCCTGGAACTGAATTATGTAAAACTGTTTTGAATACTAAATATGAAGAAAATCCAACATTTATGGTACACAGTGGAC
AATATCGAAAATATGGTTTAAAAGAAAATGAAGCAAGAGCTTATGACTTAATGATGCACTCAGAAATGTGGAAATCAAAC
CAAAAAGTAATCACTAAAAATCTTGCAAAAGTATACCTTGAAGAAGCAAAAATGCAAGGGGCGGATATTCGAAAAGTTAC
CGAATTACTATTTAAATACCGGAATTTTATAATTTAA

Upstream 100 bases:

>100_bases
ACAATTATTATGATGATGGTGCAGATGCGATATTAATGATAAAACGAAGGTCAGATTTAGTTGGTAATTACCCTATTTTT
GTAAACATGTGGTAGATACT

Downstream 100 bases:

>100_bases
ACGAGGGAGATTATGATTAGAACTGATATGGAACTTAAAGAACTTACGAATGAAATATGCGAATTTATCCGTGAACAAGT
TGAAAATGCAAATGCAAAAG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MKVIIYSKDIYSYGAMLISGILKEKHNYDVKLVRNLSENNLFLNSDVVIFSLYSTLNILDENIKNTIELIKKSGKTRVYV
AGPVSAYPEIILNELNLDGVILGEGELTTPEIILGGKNGLAYFKNDEIIKNNVEKKPELDFSKIYIPKDIEKQTVRGANI
YMETHRGCLGHCTFCQVPEFFGRDIRSKPLELILNEVKALKRRGVNRIAISGGTGSLYNFKNSLNRDNFIEMVKSVSEII
GKENLSIPDMRVDYIDEEILCAIRDYSIGWVFYGIESGSNELLKKMKKGTNTAKNLRAIKTAKECGVKVAGSFIVGHPDE
SEYDYLLTKDFIVDAELDDIFISAAEPIPGTELCKTVLNTKYEENPTFMVHSGQYRKYGLKENEARAYDLMMHSEMWKSN
QKVITKNLAKVYLEEAKMQGADIRKVTELLFKYRNFII

Sequences:

>Translated_438_residues
MKVIIYSKDIYSYGAMLISGILKEKHNYDVKLVRNLSENNLFLNSDVVIFSLYSTLNILDENIKNTIELIKKSGKTRVYV
AGPVSAYPEIILNELNLDGVILGEGELTTPEIILGGKNGLAYFKNDEIIKNNVEKKPELDFSKIYIPKDIEKQTVRGANI
YMETHRGCLGHCTFCQVPEFFGRDIRSKPLELILNEVKALKRRGVNRIAISGGTGSLYNFKNSLNRDNFIEMVKSVSEII
GKENLSIPDMRVDYIDEEILCAIRDYSIGWVFYGIESGSNELLKKMKKGTNTAKNLRAIKTAKECGVKVAGSFIVGHPDE
SEYDYLLTKDFIVDAELDDIFISAAEPIPGTELCKTVLNTKYEENPTFMVHSGQYRKYGLKENEARAYDLMMHSEMWKSN
QKVITKNLAKVYLEEAKMQGADIRKVTELLFKYRNFII
>Mature_438_residues
MKVIIYSKDIYSYGAMLISGILKEKHNYDVKLVRNLSENNLFLNSDVVIFSLYSTLNILDENIKNTIELIKKSGKTRVYV
AGPVSAYPEIILNELNLDGVILGEGELTTPEIILGGKNGLAYFKNDEIIKNNVEKKPELDFSKIYIPKDIEKQTVRGANI
YMETHRGCLGHCTFCQVPEFFGRDIRSKPLELILNEVKALKRRGVNRIAISGGTGSLYNFKNSLNRDNFIEMVKSVSEII
GKENLSIPDMRVDYIDEEILCAIRDYSIGWVFYGIESGSNELLKKMKKGTNTAKNLRAIKTAKECGVKVAGSFIVGHPDE
SEYDYLLTKDFIVDAELDDIFISAAEPIPGTELCKTVLNTKYEENPTFMVHSGQYRKYGLKENEARAYDLMMHSEMWKSN
QKVITKNLAKVYLEEAKMQGADIRKVTELLFKYRNFII

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methylthiotransferase family [H]

Homologues:

Organism=Escherichia coli, GI1786882, Length=239, Percent_Identity=24.6861924686192, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR020612
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 49782; Mature: 49782

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIIYSKDIYSYGAMLISGILKEKHNYDVKLVRNLSENNLFLNSDVVIFSLYSTLNILD
CEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEECCEEEEEHHHHHHHHH
ENIKNTIELIKKSGKTRVYVAGPVSAYPEIILNELNLDGVILGEGELTTPEIILGGKNGL
HHHHHHHHHHHHCCCEEEEEECCHHHCHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCC
AYFKNDEIIKNNVEKKPELDFSKIYIPKDIEKQTVRGANIYMETHRGCLGHCTFCQVPEF
EEECCCHHHHCCCCCCCCCCCEEEECCCCCHHHHCCCCEEEEECCCCCCCCCHHCCCHHH
FGRDIRSKPLELILNEVKALKRRGVNRIAISGGTGSLYNFKNSLNRDNFIEMVKSVSEII
HCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH
GKENLSIPDMRVDYIDEEILCAIRDYSIGWVFYGIESGSNELLKKMKKGTNTAKNLRAIK
CCCCCCCCCCCHHHCCHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHH
TAKECGVKVAGSFIVGHPDESEYDYLLTKDFIVDAELDDIFISAAEPIPGTELCKTVLNT
HHHHCCCEEECEEEEECCCCCCCCEEEEECEEEECCCCCEEEECCCCCCHHHHHHHHHCC
KYEENPTFMVHSGQYRKYGLKENEARAYDLMMHSEMWKSNQKVITKNLAKVYLEEAKMQG
CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
ADIRKVTELLFKYRNFII
CHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVIIYSKDIYSYGAMLISGILKEKHNYDVKLVRNLSENNLFLNSDVVIFSLYSTLNILD
CEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEECCEEEEEHHHHHHHHH
ENIKNTIELIKKSGKTRVYVAGPVSAYPEIILNELNLDGVILGEGELTTPEIILGGKNGL
HHHHHHHHHHHHCCCEEEEEECCHHHCHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCC
AYFKNDEIIKNNVEKKPELDFSKIYIPKDIEKQTVRGANIYMETHRGCLGHCTFCQVPEF
EEECCCHHHHCCCCCCCCCCCEEEECCCCCHHHHCCCCEEEEECCCCCCCCCHHCCCHHH
FGRDIRSKPLELILNEVKALKRRGVNRIAISGGTGSLYNFKNSLNRDNFIEMVKSVSEII
HCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH
GKENLSIPDMRVDYIDEEILCAIRDYSIGWVFYGIESGSNELLKKMKKGTNTAKNLRAIK
CCCCCCCCCCCHHHCCHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHH
TAKECGVKVAGSFIVGHPDESEYDYLLTKDFIVDAELDDIFISAAEPIPGTELCKTVLNT
HHHHCCCEEECEEEEECCCCCCCCEEEEECEEEECCCCCEEEECCCCCCHHHHHHHHHCC
KYEENPTFMVHSGQYRKYGLKENEARAYDLMMHSEMWKSNQKVITKNLAKVYLEEAKMQG
CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
ADIRKVTELLFKYRNFII
CHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]