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The map label for this gene is 150399409

Identifier: 150399409

GI number: 150399409

Start: 707957

End: 708157

Strand: Reverse

Name: 150399409

Synonym: Mevan_0658

Alternate gene names: NA

Gene position: 708157-707957 (Counterclockwise)

Preceding gene: 150399410

Following gene: 150399408

Centisome position: 41.17

GC content: 39.8

Gene sequence:

>201_bases
ATGGCAGAACTTCCAGTTGCACCAATGGAAAGAATTTTAAAATCAGCAGGTGCTGATAGAGTAAGCAGGGACGCAGCAGT
AATGCTCGCAGAGGCATTAGAAGAAATCGCAACAGATTTAGCGAGAGAAGCAGTAATATTAGCAAAGCACGCTGGCAGAA
AAACTGTTAAAGCAGAAGATTTAAAATATGCAATGAAATAA

Upstream 100 bases:

>100_bases
TCAATCCTTTAAATTTAAAAAAAGAATATATTTTTAAACGAAAATTATAAATACTGGAAGAAAGCCAATTTTAAGTATAG
AAAGAAATTAAGGTGATTTT

Downstream 100 bases:

>100_bases
TTACTTTAACAATTTTTAGCTAATTTTATTTTTTTCACTACTACTGCTAAAAATATTTTATACAATTTGCATAATATATA
GTTAGTTATTATATCTTGTG

Product: transcription factor CBF/NF-Y histone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MAELPVAPMERILKSAGADRVSRDAAVMLAEALEEIATDLAREAVILAKHAGRKTVKAEDLKYAMK

Sequences:

>Translated_66_residues
MAELPVAPMERILKSAGADRVSRDAAVMLAEALEEIATDLAREAVILAKHAGRKTVKAEDLKYAMK
>Mature_65_residues
AELPVAPMERILKSAGADRVSRDAAVMLAEALEEIATDLAREAVILAKHAGRKTVKAEDLKYAMK

Specific function: Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation [H]

COG id: COG2036

COG function: function code B; Histones H3 and H4

Gene ontology:

Cell location: Cytoplasm (Potential). Chromosome (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal histone HMF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003958
- InterPro:   IPR009072 [H]

Pfam domain/function: PF00808 CBFD_NFYB_HMF [H]

EC number: NA

Molecular weight: Translated: 7135; Mature: 7004

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELPVAPMERILKSAGADRVSRDAAVMLAEALEEIATDLAREAVILAKHAGRKTVKAED
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LKYAMK
HHHHCC
>Mature Secondary Structure 
AELPVAPMERILKSAGADRVSRDAAVMLAEALEEIATDLAREAVILAKHAGRKTVKAED
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LKYAMK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]