Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399375

Identifier: 150399375

GI number: 150399375

Start: 678519

End: 680804

Strand: Reverse

Name: 150399375

Synonym: Mevan_0624

Alternate gene names: NA

Gene position: 680804-678519 (Counterclockwise)

Preceding gene: 150399376

Following gene: 150399374

Centisome position: 39.58

GC content: 34.56

Gene sequence:

>2286_bases
ATGATTGATAACTGTAAAATTTGTGAAGGAACCGGTAAAAAGGTAATTAAGTATATTGAATGTCCAGAATGTAATGGAAC
AGGATATTTGGAAGAATTTGAAACAAAAAAGCACTTTAAAAGTGTTTCAAAAAATTCAAAATATGATTTTGATGATGCCG
AAGTTCCATGCCCTTCCTGCGATGGAAAAGGAACGATTCCACAATATGGTGAATGTGACTACTGTATGGGCACTGGAAAA
GTTATAAAATGCGATTCTTGTGGAAGGGAAATTGGAAAATATCCTGAAAATAAAGAAATTAGGATTTGCGATAACTGTAA
GAACAAAGAATCTGAAAGGCAAGAAAATAAAAAAATAGTCTATGTCCTCGATGAATTATGCACAATGAATGACTTAAAAG
AAGGTAGATTTTATAAAGGTAAAGTTAATAGGATTGAAAAATACGGCGTATTCGTACAATTGAATGATAAAACAAGGGGA
CTTTTAAGGTTTAGGGAAGTTATTGGGAAAAAACCAAGCGATTTTGAAGTCGGCGATGAACTAGTTGTACAAATTTTTGA
ATTGAAACTCGATAAGCGGGAAGTCGATTTAAGATATACTCCAATCGTAGGATATAAATTGGAAAAAATGGAGAAAAAAC
ACGATTTAATAACGATTAGAGAAATATTTGAAACTGGATTAATGAATATGAAGGATAAAATTATTAGAATTCAAGGAGAA
GTAATTCAAGCAGTTCAAACTCCAGGTCCAACTGTTTTTACAATTACAGATGGCTCAGAGGTTGCATGGATTGCAGCTTT
TGAGTCTGCGGGAGTTAGAACTCACCCTGATGTAGTAATGGGTTCAATTATTGATGTAGTCGGGTCAGTATCTGTAAGGG
ATGGAAAATTACAGATAGAACGGATAAGGCTTGAGAAACTCGAAGGGGACACTGCCGAAGAAGTTAAACTAAATATAGAT
TCACAGTTAGATAAAAAAGCAGAACCTTCAAGTGATATAGAGTTTTTAGTAGATAATGAAATTTTGGAGAAATTACGGCC
AAAAATGGCAGATGTTGCAAAAAGAATTAGAAGAGCAGTTTTAGATGGAAGGCCAGTAATTGTAAGGCATCATGCAGATA
CAGATGGCTACTGTGGTGGAATTGCACTTGAAAAAGCAATTATCCCCATTCTTGAAAAATTTTCAATGGATGCAGGTGCG
CAGTGGCATTTCTTTAGAAGAAGTCCTTCAAAAGCTCCATTTTATGAATTAGAGGATGTAACTAAGGATTTAGTATTTTC
GATTGAAGATAATTTAAGATTTGGGCAAAAAATGCCTTTAATAGTTCTTGTGGACAACGGGAGTACTGACGAGGATATAC
CTGCAGTTTCAAAGGTTAAAGCTTACGATGTAGAAGTTGTTGTTGTAGATCACCACTTCCCTGGAGATATAATCGATGGG
AAAGTTGAAGTTGATGAGTACGTTGAAGCACACGTAAATCCCTATTTAGTTGGTGGAAACAGTAATTTAACAGCCGGAGT
TTTAGGAACTGAAGTTGCAAGAATGATAAATCCAGACGTTACTGATTTAATTAGCCATTTGCCCGGAATTGCTGTTGTAG
GGGATCACGCTAAAGGCGAAGCTATTGATAGTTACATAAAAATTGCACTTGACAGATTTAACTCATGCAGTGCAGAATTT
GGAAGTGGAAAAATATATGCTAGGGAAGATTTAGAAAAAATCGGACTTTGTATGGATTTTGAAGCATTTTATTTGAAATT
TATGAATGGAATGGGCATTGTAGAAGACATATATGGAATGAATAAAAAAGACTTTAAAAGACATGAAAAACTCATTAATA
TTCTATATGAAAGGGCAATGTCAATGGTAGATAGGCAAATGAAAGCAGTAAAACCTGCAATTAAAACCGAAGTTTTACAA
AATGGAATTATTTATAACATACTTGATGTTGAAAAATACGCCCATAAATTTACATTTCCAGCGCCTGGAAAAACTTGCGG
TTTTGCACATGACTCGATAGTTTTAAAACATCCTGCAAATACTCCAATAATTACGCTTTCATATGGGCCCGACTTTGGAG
TTGTTAGGGCAACTGATGCAGTAAGTGATAAATTTAGCTTTAATCTAAATCTAATCGTAAATAGGTTAATTGATGAAATT
CCTGAAGCATCCCTTGACGGTGGCGGACACGAATGTGCTGGAAGTTTGAAGTTTGTTGAGGGCTTAAGAGAAAAAGTACT
TAATAGATTTTTCGAAATAGTTAATGGAATGAATCAAAATGTCTAA

Upstream 100 bases:

>100_bases
ATATATAATTAAATTTACATTGTTTTTAAAGAAACAGTTTAATCTATTTATTTTATACATTTATTACTAATAATTATTAA
TTCAATTTACGAGGATAACT

Downstream 100 bases:

>100_bases
CTTATTTTATATTACCTCTTAATTGGTGTTTTTATGGGAGTTCAGTTTGGAGATATAATTCCTAAAAAAGAAATCTCTTT
AAAACTTTTAAGAACTAAAT

Product: phosphoesterase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 761; Mature: 761

Protein sequence:

>761_residues
MIDNCKICEGTGKKVIKYIECPECNGTGYLEEFETKKHFKSVSKNSKYDFDDAEVPCPSCDGKGTIPQYGECDYCMGTGK
VIKCDSCGREIGKYPENKEIRICDNCKNKESERQENKKIVYVLDELCTMNDLKEGRFYKGKVNRIEKYGVFVQLNDKTRG
LLRFREVIGKKPSDFEVGDELVVQIFELKLDKREVDLRYTPIVGYKLEKMEKKHDLITIREIFETGLMNMKDKIIRIQGE
VIQAVQTPGPTVFTITDGSEVAWIAAFESAGVRTHPDVVMGSIIDVVGSVSVRDGKLQIERIRLEKLEGDTAEEVKLNID
SQLDKKAEPSSDIEFLVDNEILEKLRPKMADVAKRIRRAVLDGRPVIVRHHADTDGYCGGIALEKAIIPILEKFSMDAGA
QWHFFRRSPSKAPFYELEDVTKDLVFSIEDNLRFGQKMPLIVLVDNGSTDEDIPAVSKVKAYDVEVVVVDHHFPGDIIDG
KVEVDEYVEAHVNPYLVGGNSNLTAGVLGTEVARMINPDVTDLISHLPGIAVVGDHAKGEAIDSYIKIALDRFNSCSAEF
GSGKIYAREDLEKIGLCMDFEAFYLKFMNGMGIVEDIYGMNKKDFKRHEKLINILYERAMSMVDRQMKAVKPAIKTEVLQ
NGIIYNILDVEKYAHKFTFPAPGKTCGFAHDSIVLKHPANTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVNRLIDEI
PEASLDGGGHECAGSLKFVEGLREKVLNRFFEIVNGMNQNV

Sequences:

>Translated_761_residues
MIDNCKICEGTGKKVIKYIECPECNGTGYLEEFETKKHFKSVSKNSKYDFDDAEVPCPSCDGKGTIPQYGECDYCMGTGK
VIKCDSCGREIGKYPENKEIRICDNCKNKESERQENKKIVYVLDELCTMNDLKEGRFYKGKVNRIEKYGVFVQLNDKTRG
LLRFREVIGKKPSDFEVGDELVVQIFELKLDKREVDLRYTPIVGYKLEKMEKKHDLITIREIFETGLMNMKDKIIRIQGE
VIQAVQTPGPTVFTITDGSEVAWIAAFESAGVRTHPDVVMGSIIDVVGSVSVRDGKLQIERIRLEKLEGDTAEEVKLNID
SQLDKKAEPSSDIEFLVDNEILEKLRPKMADVAKRIRRAVLDGRPVIVRHHADTDGYCGGIALEKAIIPILEKFSMDAGA
QWHFFRRSPSKAPFYELEDVTKDLVFSIEDNLRFGQKMPLIVLVDNGSTDEDIPAVSKVKAYDVEVVVVDHHFPGDIIDG
KVEVDEYVEAHVNPYLVGGNSNLTAGVLGTEVARMINPDVTDLISHLPGIAVVGDHAKGEAIDSYIKIALDRFNSCSAEF
GSGKIYAREDLEKIGLCMDFEAFYLKFMNGMGIVEDIYGMNKKDFKRHEKLINILYERAMSMVDRQMKAVKPAIKTEVLQ
NGIIYNILDVEKYAHKFTFPAPGKTCGFAHDSIVLKHPANTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVNRLIDEI
PEASLDGGGHECAGSLKFVEGLREKVLNRFFEIVNGMNQNV
>Mature_761_residues
MIDNCKICEGTGKKVIKYIECPECNGTGYLEEFETKKHFKSVSKNSKYDFDDAEVPCPSCDGKGTIPQYGECDYCMGTGK
VIKCDSCGREIGKYPENKEIRICDNCKNKESERQENKKIVYVLDELCTMNDLKEGRFYKGKVNRIEKYGVFVQLNDKTRG
LLRFREVIGKKPSDFEVGDELVVQIFELKLDKREVDLRYTPIVGYKLEKMEKKHDLITIREIFETGLMNMKDKIIRIQGE
VIQAVQTPGPTVFTITDGSEVAWIAAFESAGVRTHPDVVMGSIIDVVGSVSVRDGKLQIERIRLEKLEGDTAEEVKLNID
SQLDKKAEPSSDIEFLVDNEILEKLRPKMADVAKRIRRAVLDGRPVIVRHHADTDGYCGGIALEKAIIPILEKFSMDAGA
QWHFFRRSPSKAPFYELEDVTKDLVFSIEDNLRFGQKMPLIVLVDNGSTDEDIPAVSKVKAYDVEVVVVDHHFPGDIIDG
KVEVDEYVEAHVNPYLVGGNSNLTAGVLGTEVARMINPDVTDLISHLPGIAVVGDHAKGEAIDSYIKIALDRFNSCSAEF
GSGKIYAREDLEKIGLCMDFEAFYLKFMNGMGIVEDIYGMNKKDFKRHEKLINILYERAMSMVDRQMKAVKPAIKTEVLQ
NGIIYNILDVEKYAHKFTFPAPGKTCGFAHDSIVLKHPANTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVNRLIDEI
PEASLDGGGHECAGSLKFVEGLREKVLNRFFEIVNGMNQNV

Specific function: Unknown

COG id: COG1107

COG function: function code L; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001305
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365
- InterPro:   IPR001667
- InterPro:   IPR003029
- InterPro:   IPR022967 [H]

Pfam domain/function: PF01368 DHH; PF00575 S1; PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 85422; Mature: 85422

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDNCKICEGTGKKVIKYIECPECNGTGYLEEFETKKHFKSVSKNSKYDFDDAEVPCPSC
CCCCCCEECCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DGKGTIPQYGECDYCMGTGKVIKCDSCGREIGKYPENKEIRICDNCKNKESERQENKKIV
CCCCCCCCCCCCCEEECCCCEEEECHHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCEE
YVLDELCTMNDLKEGRFYKGKVNRIEKYGVFVQLNDKTRGLLRFREVIGKKPSDFEVGDE
EEHHHHHHHHHHHCCCEECCHHHEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHH
LVVQIFELKLDKREVDLRYTPIVGYKLEKMEKKHDLITIREIFETGLMNMKDKIIRIQGE
HHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHEEEHHH
VIQAVQTPGPTVFTITDGSEVAWIAAFESAGVRTHPDVVMGSIIDVVGSVSVRDGKLQIE
HHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEE
RIRLEKLEGDTAEEVKLNIDSQLDKKAEPSSDIEFLVDNEILEKLRPKMADVAKRIRRAV
EEHHHHCCCCCHHHEEEECCHHCCCCCCCCCCCEEEECHHHHHHHCHHHHHHHHHHHHHH
LDGRPVIVRHHADTDGYCGGIALEKAIIPILEKFSMDAGAQWHFFRRSPSKAPFYELEDV
HCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH
TKDLVFSIEDNLRFGQKMPLIVLVDNGSTDEDIPAVSKVKAYDVEVVVVDHHFPGDIIDG
HHHHHEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHEEEEEEEEEEEECCCCCCCCCC
KVEVDEYVEAHVNPYLVGGNSNLTAGVLGTEVARMINPDVTDLISHLPGIAVVGDHAKGE
EECHHHHHHHCCCEEEECCCCCCEEHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCH
AIDSYIKIALDRFNSCSAEFGSGKIYAREDLEKIGLCMDFEAFYLKFMNGMGIVEDIYGM
HHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCEECHHHHHHHHHCCCCHHHHHHCC
NKKDFKRHEKLINILYERAMSMVDRQMKAVKPAIKTEVLQNGIIYNILDVEKYAHKFTFP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHEECCC
APGKTCGFAHDSIVLKHPANTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVNRLIDEI
CCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCEEEECCCCCCCCEEHHHHHHHHHHHHC
PEASLDGGGHECAGSLKFVEGLREKVLNRFFEIVNGMNQNV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIDNCKICEGTGKKVIKYIECPECNGTGYLEEFETKKHFKSVSKNSKYDFDDAEVPCPSC
CCCCCCEECCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DGKGTIPQYGECDYCMGTGKVIKCDSCGREIGKYPENKEIRICDNCKNKESERQENKKIV
CCCCCCCCCCCCCEEECCCCEEEECHHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCEE
YVLDELCTMNDLKEGRFYKGKVNRIEKYGVFVQLNDKTRGLLRFREVIGKKPSDFEVGDE
EEHHHHHHHHHHHCCCEECCHHHEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHH
LVVQIFELKLDKREVDLRYTPIVGYKLEKMEKKHDLITIREIFETGLMNMKDKIIRIQGE
HHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHEEEHHH
VIQAVQTPGPTVFTITDGSEVAWIAAFESAGVRTHPDVVMGSIIDVVGSVSVRDGKLQIE
HHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEE
RIRLEKLEGDTAEEVKLNIDSQLDKKAEPSSDIEFLVDNEILEKLRPKMADVAKRIRRAV
EEHHHHCCCCCHHHEEEECCHHCCCCCCCCCCCEEEECHHHHHHHCHHHHHHHHHHHHHH
LDGRPVIVRHHADTDGYCGGIALEKAIIPILEKFSMDAGAQWHFFRRSPSKAPFYELEDV
HCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH
TKDLVFSIEDNLRFGQKMPLIVLVDNGSTDEDIPAVSKVKAYDVEVVVVDHHFPGDIIDG
HHHHHEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHEEEEEEEEEEEECCCCCCCCCC
KVEVDEYVEAHVNPYLVGGNSNLTAGVLGTEVARMINPDVTDLISHLPGIAVVGDHAKGE
EECHHHHHHHCCCEEEECCCCCCEEHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCH
AIDSYIKIALDRFNSCSAEFGSGKIYAREDLEKIGLCMDFEAFYLKFMNGMGIVEDIYGM
HHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCEECHHHHHHHHHCCCCHHHHHHCC
NKKDFKRHEKLINILYERAMSMVDRQMKAVKPAIKTEVLQNGIIYNILDVEKYAHKFTFP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHEECCC
APGKTCGFAHDSIVLKHPANTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVNRLIDEI
CCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCEEEECCCCCCCCEEHHHHHHHHHHHHC
PEASLDGGGHECAGSLKFVEGLREKVLNRFFEIVNGMNQNV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]