| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399375
Identifier: 150399375
GI number: 150399375
Start: 678519
End: 680804
Strand: Reverse
Name: 150399375
Synonym: Mevan_0624
Alternate gene names: NA
Gene position: 680804-678519 (Counterclockwise)
Preceding gene: 150399376
Following gene: 150399374
Centisome position: 39.58
GC content: 34.56
Gene sequence:
>2286_bases ATGATTGATAACTGTAAAATTTGTGAAGGAACCGGTAAAAAGGTAATTAAGTATATTGAATGTCCAGAATGTAATGGAAC AGGATATTTGGAAGAATTTGAAACAAAAAAGCACTTTAAAAGTGTTTCAAAAAATTCAAAATATGATTTTGATGATGCCG AAGTTCCATGCCCTTCCTGCGATGGAAAAGGAACGATTCCACAATATGGTGAATGTGACTACTGTATGGGCACTGGAAAA GTTATAAAATGCGATTCTTGTGGAAGGGAAATTGGAAAATATCCTGAAAATAAAGAAATTAGGATTTGCGATAACTGTAA GAACAAAGAATCTGAAAGGCAAGAAAATAAAAAAATAGTCTATGTCCTCGATGAATTATGCACAATGAATGACTTAAAAG AAGGTAGATTTTATAAAGGTAAAGTTAATAGGATTGAAAAATACGGCGTATTCGTACAATTGAATGATAAAACAAGGGGA CTTTTAAGGTTTAGGGAAGTTATTGGGAAAAAACCAAGCGATTTTGAAGTCGGCGATGAACTAGTTGTACAAATTTTTGA ATTGAAACTCGATAAGCGGGAAGTCGATTTAAGATATACTCCAATCGTAGGATATAAATTGGAAAAAATGGAGAAAAAAC ACGATTTAATAACGATTAGAGAAATATTTGAAACTGGATTAATGAATATGAAGGATAAAATTATTAGAATTCAAGGAGAA GTAATTCAAGCAGTTCAAACTCCAGGTCCAACTGTTTTTACAATTACAGATGGCTCAGAGGTTGCATGGATTGCAGCTTT TGAGTCTGCGGGAGTTAGAACTCACCCTGATGTAGTAATGGGTTCAATTATTGATGTAGTCGGGTCAGTATCTGTAAGGG ATGGAAAATTACAGATAGAACGGATAAGGCTTGAGAAACTCGAAGGGGACACTGCCGAAGAAGTTAAACTAAATATAGAT TCACAGTTAGATAAAAAAGCAGAACCTTCAAGTGATATAGAGTTTTTAGTAGATAATGAAATTTTGGAGAAATTACGGCC AAAAATGGCAGATGTTGCAAAAAGAATTAGAAGAGCAGTTTTAGATGGAAGGCCAGTAATTGTAAGGCATCATGCAGATA CAGATGGCTACTGTGGTGGAATTGCACTTGAAAAAGCAATTATCCCCATTCTTGAAAAATTTTCAATGGATGCAGGTGCG CAGTGGCATTTCTTTAGAAGAAGTCCTTCAAAAGCTCCATTTTATGAATTAGAGGATGTAACTAAGGATTTAGTATTTTC GATTGAAGATAATTTAAGATTTGGGCAAAAAATGCCTTTAATAGTTCTTGTGGACAACGGGAGTACTGACGAGGATATAC CTGCAGTTTCAAAGGTTAAAGCTTACGATGTAGAAGTTGTTGTTGTAGATCACCACTTCCCTGGAGATATAATCGATGGG AAAGTTGAAGTTGATGAGTACGTTGAAGCACACGTAAATCCCTATTTAGTTGGTGGAAACAGTAATTTAACAGCCGGAGT TTTAGGAACTGAAGTTGCAAGAATGATAAATCCAGACGTTACTGATTTAATTAGCCATTTGCCCGGAATTGCTGTTGTAG GGGATCACGCTAAAGGCGAAGCTATTGATAGTTACATAAAAATTGCACTTGACAGATTTAACTCATGCAGTGCAGAATTT GGAAGTGGAAAAATATATGCTAGGGAAGATTTAGAAAAAATCGGACTTTGTATGGATTTTGAAGCATTTTATTTGAAATT TATGAATGGAATGGGCATTGTAGAAGACATATATGGAATGAATAAAAAAGACTTTAAAAGACATGAAAAACTCATTAATA TTCTATATGAAAGGGCAATGTCAATGGTAGATAGGCAAATGAAAGCAGTAAAACCTGCAATTAAAACCGAAGTTTTACAA AATGGAATTATTTATAACATACTTGATGTTGAAAAATACGCCCATAAATTTACATTTCCAGCGCCTGGAAAAACTTGCGG TTTTGCACATGACTCGATAGTTTTAAAACATCCTGCAAATACTCCAATAATTACGCTTTCATATGGGCCCGACTTTGGAG TTGTTAGGGCAACTGATGCAGTAAGTGATAAATTTAGCTTTAATCTAAATCTAATCGTAAATAGGTTAATTGATGAAATT CCTGAAGCATCCCTTGACGGTGGCGGACACGAATGTGCTGGAAGTTTGAAGTTTGTTGAGGGCTTAAGAGAAAAAGTACT TAATAGATTTTTCGAAATAGTTAATGGAATGAATCAAAATGTCTAA
Upstream 100 bases:
>100_bases ATATATAATTAAATTTACATTGTTTTTAAAGAAACAGTTTAATCTATTTATTTTATACATTTATTACTAATAATTATTAA TTCAATTTACGAGGATAACT
Downstream 100 bases:
>100_bases CTTATTTTATATTACCTCTTAATTGGTGTTTTTATGGGAGTTCAGTTTGGAGATATAATTCCTAAAAAAGAAATCTCTTT AAAACTTTTAAGAACTAAAT
Product: phosphoesterase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 761; Mature: 761
Protein sequence:
>761_residues MIDNCKICEGTGKKVIKYIECPECNGTGYLEEFETKKHFKSVSKNSKYDFDDAEVPCPSCDGKGTIPQYGECDYCMGTGK VIKCDSCGREIGKYPENKEIRICDNCKNKESERQENKKIVYVLDELCTMNDLKEGRFYKGKVNRIEKYGVFVQLNDKTRG LLRFREVIGKKPSDFEVGDELVVQIFELKLDKREVDLRYTPIVGYKLEKMEKKHDLITIREIFETGLMNMKDKIIRIQGE VIQAVQTPGPTVFTITDGSEVAWIAAFESAGVRTHPDVVMGSIIDVVGSVSVRDGKLQIERIRLEKLEGDTAEEVKLNID SQLDKKAEPSSDIEFLVDNEILEKLRPKMADVAKRIRRAVLDGRPVIVRHHADTDGYCGGIALEKAIIPILEKFSMDAGA QWHFFRRSPSKAPFYELEDVTKDLVFSIEDNLRFGQKMPLIVLVDNGSTDEDIPAVSKVKAYDVEVVVVDHHFPGDIIDG KVEVDEYVEAHVNPYLVGGNSNLTAGVLGTEVARMINPDVTDLISHLPGIAVVGDHAKGEAIDSYIKIALDRFNSCSAEF GSGKIYAREDLEKIGLCMDFEAFYLKFMNGMGIVEDIYGMNKKDFKRHEKLINILYERAMSMVDRQMKAVKPAIKTEVLQ NGIIYNILDVEKYAHKFTFPAPGKTCGFAHDSIVLKHPANTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVNRLIDEI PEASLDGGGHECAGSLKFVEGLREKVLNRFFEIVNGMNQNV
Sequences:
>Translated_761_residues MIDNCKICEGTGKKVIKYIECPECNGTGYLEEFETKKHFKSVSKNSKYDFDDAEVPCPSCDGKGTIPQYGECDYCMGTGK VIKCDSCGREIGKYPENKEIRICDNCKNKESERQENKKIVYVLDELCTMNDLKEGRFYKGKVNRIEKYGVFVQLNDKTRG LLRFREVIGKKPSDFEVGDELVVQIFELKLDKREVDLRYTPIVGYKLEKMEKKHDLITIREIFETGLMNMKDKIIRIQGE VIQAVQTPGPTVFTITDGSEVAWIAAFESAGVRTHPDVVMGSIIDVVGSVSVRDGKLQIERIRLEKLEGDTAEEVKLNID SQLDKKAEPSSDIEFLVDNEILEKLRPKMADVAKRIRRAVLDGRPVIVRHHADTDGYCGGIALEKAIIPILEKFSMDAGA QWHFFRRSPSKAPFYELEDVTKDLVFSIEDNLRFGQKMPLIVLVDNGSTDEDIPAVSKVKAYDVEVVVVDHHFPGDIIDG KVEVDEYVEAHVNPYLVGGNSNLTAGVLGTEVARMINPDVTDLISHLPGIAVVGDHAKGEAIDSYIKIALDRFNSCSAEF GSGKIYAREDLEKIGLCMDFEAFYLKFMNGMGIVEDIYGMNKKDFKRHEKLINILYERAMSMVDRQMKAVKPAIKTEVLQ NGIIYNILDVEKYAHKFTFPAPGKTCGFAHDSIVLKHPANTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVNRLIDEI PEASLDGGGHECAGSLKFVEGLREKVLNRFFEIVNGMNQNV >Mature_761_residues MIDNCKICEGTGKKVIKYIECPECNGTGYLEEFETKKHFKSVSKNSKYDFDDAEVPCPSCDGKGTIPQYGECDYCMGTGK VIKCDSCGREIGKYPENKEIRICDNCKNKESERQENKKIVYVLDELCTMNDLKEGRFYKGKVNRIEKYGVFVQLNDKTRG LLRFREVIGKKPSDFEVGDELVVQIFELKLDKREVDLRYTPIVGYKLEKMEKKHDLITIREIFETGLMNMKDKIIRIQGE VIQAVQTPGPTVFTITDGSEVAWIAAFESAGVRTHPDVVMGSIIDVVGSVSVRDGKLQIERIRLEKLEGDTAEEVKLNID SQLDKKAEPSSDIEFLVDNEILEKLRPKMADVAKRIRRAVLDGRPVIVRHHADTDGYCGGIALEKAIIPILEKFSMDAGA QWHFFRRSPSKAPFYELEDVTKDLVFSIEDNLRFGQKMPLIVLVDNGSTDEDIPAVSKVKAYDVEVVVVDHHFPGDIIDG KVEVDEYVEAHVNPYLVGGNSNLTAGVLGTEVARMINPDVTDLISHLPGIAVVGDHAKGEAIDSYIKIALDRFNSCSAEF GSGKIYAREDLEKIGLCMDFEAFYLKFMNGMGIVEDIYGMNKKDFKRHEKLINILYERAMSMVDRQMKAVKPAIKTEVLQ NGIIYNILDVEKYAHKFTFPAPGKTCGFAHDSIVLKHPANTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVNRLIDEI PEASLDGGGHECAGSLKFVEGLREKVLNRFFEIVNGMNQNV
Specific function: Unknown
COG id: COG1107
COG function: function code L; Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001305 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004365 - InterPro: IPR001667 - InterPro: IPR003029 - InterPro: IPR022967 [H]
Pfam domain/function: PF01368 DHH; PF00575 S1; PF01336 tRNA_anti [H]
EC number: NA
Molecular weight: Translated: 85422; Mature: 85422
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS50126 S1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDNCKICEGTGKKVIKYIECPECNGTGYLEEFETKKHFKSVSKNSKYDFDDAEVPCPSC CCCCCCEECCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DGKGTIPQYGECDYCMGTGKVIKCDSCGREIGKYPENKEIRICDNCKNKESERQENKKIV CCCCCCCCCCCCCEEECCCCEEEECHHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCEE YVLDELCTMNDLKEGRFYKGKVNRIEKYGVFVQLNDKTRGLLRFREVIGKKPSDFEVGDE EEHHHHHHHHHHHCCCEECCHHHEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHH LVVQIFELKLDKREVDLRYTPIVGYKLEKMEKKHDLITIREIFETGLMNMKDKIIRIQGE HHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHEEEHHH VIQAVQTPGPTVFTITDGSEVAWIAAFESAGVRTHPDVVMGSIIDVVGSVSVRDGKLQIE HHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEE RIRLEKLEGDTAEEVKLNIDSQLDKKAEPSSDIEFLVDNEILEKLRPKMADVAKRIRRAV EEHHHHCCCCCHHHEEEECCHHCCCCCCCCCCCEEEECHHHHHHHCHHHHHHHHHHHHHH LDGRPVIVRHHADTDGYCGGIALEKAIIPILEKFSMDAGAQWHFFRRSPSKAPFYELEDV HCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH TKDLVFSIEDNLRFGQKMPLIVLVDNGSTDEDIPAVSKVKAYDVEVVVVDHHFPGDIIDG HHHHHEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHEEEEEEEEEEEECCCCCCCCCC KVEVDEYVEAHVNPYLVGGNSNLTAGVLGTEVARMINPDVTDLISHLPGIAVVGDHAKGE EECHHHHHHHCCCEEEECCCCCCEEHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCH AIDSYIKIALDRFNSCSAEFGSGKIYAREDLEKIGLCMDFEAFYLKFMNGMGIVEDIYGM HHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCEECHHHHHHHHHCCCCHHHHHHCC NKKDFKRHEKLINILYERAMSMVDRQMKAVKPAIKTEVLQNGIIYNILDVEKYAHKFTFP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHEECCC APGKTCGFAHDSIVLKHPANTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVNRLIDEI CCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCEEEECCCCCCCCEEHHHHHHHHHHHHC PEASLDGGGHECAGSLKFVEGLREKVLNRFFEIVNGMNQNV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIDNCKICEGTGKKVIKYIECPECNGTGYLEEFETKKHFKSVSKNSKYDFDDAEVPCPSC CCCCCCEECCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC DGKGTIPQYGECDYCMGTGKVIKCDSCGREIGKYPENKEIRICDNCKNKESERQENKKIV CCCCCCCCCCCCCEEECCCCEEEECHHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCEE YVLDELCTMNDLKEGRFYKGKVNRIEKYGVFVQLNDKTRGLLRFREVIGKKPSDFEVGDE EEHHHHHHHHHHHCCCEECCHHHEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHH LVVQIFELKLDKREVDLRYTPIVGYKLEKMEKKHDLITIREIFETGLMNMKDKIIRIQGE HHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHEEEHHH VIQAVQTPGPTVFTITDGSEVAWIAAFESAGVRTHPDVVMGSIIDVVGSVSVRDGKLQIE HHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEE RIRLEKLEGDTAEEVKLNIDSQLDKKAEPSSDIEFLVDNEILEKLRPKMADVAKRIRRAV EEHHHHCCCCCHHHEEEECCHHCCCCCCCCCCCEEEECHHHHHHHCHHHHHHHHHHHHHH LDGRPVIVRHHADTDGYCGGIALEKAIIPILEKFSMDAGAQWHFFRRSPSKAPFYELEDV HCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH TKDLVFSIEDNLRFGQKMPLIVLVDNGSTDEDIPAVSKVKAYDVEVVVVDHHFPGDIIDG HHHHHEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHEEEEEEEEEEEECCCCCCCCCC KVEVDEYVEAHVNPYLVGGNSNLTAGVLGTEVARMINPDVTDLISHLPGIAVVGDHAKGE EECHHHHHHHCCCEEEECCCCCCEEHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCH AIDSYIKIALDRFNSCSAEFGSGKIYAREDLEKIGLCMDFEAFYLKFMNGMGIVEDIYGM HHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCEECHHHHHHHHHCCCCHHHHHHCC NKKDFKRHEKLINILYERAMSMVDRQMKAVKPAIKTEVLQNGIIYNILDVEKYAHKFTFP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHEECCC APGKTCGFAHDSIVLKHPANTPIITLSYGPDFGVVRATDAVSDKFSFNLNLIVNRLIDEI CCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCEEEECCCCCCCCEEHHHHHHHHHHHHC PEASLDGGGHECAGSLKFVEGLREKVLNRFFEIVNGMNQNV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]