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The map label for this gene is fdhB [H]

Identifier: 150399358

GI number: 150399358

Start: 662407

End: 663570

Strand: Reverse

Name: fdhB [H]

Synonym: Mevan_0607

Alternate gene names: 150399358

Gene position: 663570-662407 (Counterclockwise)

Preceding gene: 150399359

Following gene: 150399354

Centisome position: 38.58

GC content: 38.49

Gene sequence:

>1164_bases
ATGAGCAATGAAATGTACTATGTACAGGCAGCAGATCCTGCAATACTTGAAAAAGGAGAGTGTGGCGGTGCAGTTACTGC
ACTTTTTAAATACCTTTTGGATAAAAATATCGTAGATGGAGTACTTGCCTTAAAAAAAGGGGCAGACGTTTATGATGCAA
TACCTGCATTTGTAACATCTTCGGATGATTTGATAAATACTGCAGGATCACTGCACTGTGCTCCGACAATGTGGGGCGGA
ATAATTAAAGACTATTTAAAAGACGTAAAACTTGCGGTTCCGGTAAAACCTTGCGACATGAGGGCTATAGTTGAGCTTTC
AAAAAGAGCTCAAATCAATTTGGATAATATTTACATGATTGGTTTAAATTGCGGGGGAACCGTTCCTCCAAAAGTGGCCA
TTGAAATGATAAAATTATTCTATGAAGTTGACCCTAAGGATGTTATAAAGGAAGAAATAGACAAGGGTAAGTTTATAATT
GTATTAAAAGACGGAACCCATAAAGAAGTTAAAATGCACGACCTTGAAGATAATGGCTATGGAAGACGGATAAACTGCCA
GAGATGTGATGAAAAAATCCCTAGGAAAGCAGACCTTGCAGCAGGAAACTGGGGAGTAATTGGAGAAGAGTCTGGAAAGT
ACACGTTTATTGAAGTATGCAGTGAAAAAGGTAAAAAATTAATTGAAGATGCAGAAAAAGAAGGCTATATTAAGAAAAAA
ACCCCTAATTCAAAAGGACTGGAGTTAAGGGCTAAGGTAGAGGCTTCAATGTTAAAGATGGGCGATGAATATAAGAAAAA
ATGGCTTGAAGACGATTACCCATCATTTGAAAAGTGGAATGAATACTGGAGCAGGTGTATAAAGTGCTATGGATGTAGAG
ATGCATGTCCAGTATGTTTCTGTAAAGAATGTGCACTTGAAGCAGAATATATTGACCGTGGAGAAATTCCTCCAAATCCA
ATAATGTTTCAAGGAGTTAGAATGTCACACATGGCATTTAGCTGTGTAAACTGCGGACAATGTGAAGACGTATGCCCAAT
GGAAATTCCAGTTGCAAGGATATTCCATAAAGTCCAGGAAAGTGCAAAAGATGAATTTGGGTACCGCCCAGGAGTGGATG
ATAAAGAGCCCCCACTTTTAGGAAAGCCCTGTTCAACACAATAA

Upstream 100 bases:

>100_bases
ACCCTGCACTTGATCCTAACTGTAAAATCCCGGAATATAAAGTATGTGCTGCGAAAGTGGAGAAATTATAGGCTATTAGG
GATTTTAAACGAGGGATACA

Downstream 100 bases:

>100_bases
ATATTAATTCTTACTTTTTGCTTTTTTAAGTTCAGATATATATCCAACAAAAGCACCTGAGGATATGGTATCTCCAAGTC
CAACCGTACTTTTTGGATTT

Product: coenzyme F420 hydrogenase/dehydrogenase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSNEMYYVQAADPAILEKGECGGAVTALFKYLLDKNIVDGVLALKKGADVYDAIPAFVTSSDDLINTAGSLHCAPTMWGG
IIKDYLKDVKLAVPVKPCDMRAIVELSKRAQINLDNIYMIGLNCGGTVPPKVAIEMIKLFYEVDPKDVIKEEIDKGKFII
VLKDGTHKEVKMHDLEDNGYGRRINCQRCDEKIPRKADLAAGNWGVIGEESGKYTFIEVCSEKGKKLIEDAEKEGYIKKK
TPNSKGLELRAKVEASMLKMGDEYKKKWLEDDYPSFEKWNEYWSRCIKCYGCRDACPVCFCKECALEAEYIDRGEIPPNP
IMFQGVRMSHMAFSCVNCGQCEDVCPMEIPVARIFHKVQESAKDEFGYRPGVDDKEPPLLGKPCSTQ

Sequences:

>Translated_387_residues
MSNEMYYVQAADPAILEKGECGGAVTALFKYLLDKNIVDGVLALKKGADVYDAIPAFVTSSDDLINTAGSLHCAPTMWGG
IIKDYLKDVKLAVPVKPCDMRAIVELSKRAQINLDNIYMIGLNCGGTVPPKVAIEMIKLFYEVDPKDVIKEEIDKGKFII
VLKDGTHKEVKMHDLEDNGYGRRINCQRCDEKIPRKADLAAGNWGVIGEESGKYTFIEVCSEKGKKLIEDAEKEGYIKKK
TPNSKGLELRAKVEASMLKMGDEYKKKWLEDDYPSFEKWNEYWSRCIKCYGCRDACPVCFCKECALEAEYIDRGEIPPNP
IMFQGVRMSHMAFSCVNCGQCEDVCPMEIPVARIFHKVQESAKDEFGYRPGVDDKEPPLLGKPCSTQ
>Mature_386_residues
SNEMYYVQAADPAILEKGECGGAVTALFKYLLDKNIVDGVLALKKGADVYDAIPAFVTSSDDLINTAGSLHCAPTMWGGI
IKDYLKDVKLAVPVKPCDMRAIVELSKRAQINLDNIYMIGLNCGGTVPPKVAIEMIKLFYEVDPKDVIKEEIDKGKFIIV
LKDGTHKEVKMHDLEDNGYGRRINCQRCDEKIPRKADLAAGNWGVIGEESGKYTFIEVCSEKGKKLIEDAEKEGYIKKKT
PNSKGLELRAKVEASMLKMGDEYKKKWLEDDYPSFEKWNEYWSRCIKCYGCRDACPVCFCKECALEAEYIDRGEIPPNPI
MFQGVRMSHMAFSCVNCGQCEDVCPMEIPVARIFHKVQESAKDEFGYRPGVDDKEPPLLGKPCSTQ

Specific function: Catalyzes the oxidation of formate [H]

COG id: COG1035

COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: =1.2.1.2 [H]

Molecular weight: Translated: 43384; Mature: 43252

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEMYYVQAADPAILEKGECGGAVTALFKYLLDKNIVDGVLALKKGADVYDAIPAFVTS
CCCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCC
SDDLINTAGSLHCAPTMWGGIIKDYLKDVKLAVPVKPCDMRAIVELSKRAQINLDNIYMI
CCHHHHCCCCCEECHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHCEECCCEEEEE
GLNCGGTVPPKVAIEMIKLFYEVDPKDVIKEEIDKGKFIIVLKDGTHKEVKMHDLEDNGY
EECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCC
GRRINCQRCDEKIPRKADLAAGNWGVIGEESGKYTFIEVCSEKGKKLIEDAEKEGYIKKK
CCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEC
TPNSKGLELRAKVEASMLKMGDEYKKKWLEDDYPSFEKWNEYWSRCIKCYGCRDACPVCF
CCCCCCCEEEHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
CKECALEAEYIDRGEIPPNPIMFQGVRMSHMAFSCVNCGQCEDVCPMEIPVARIFHKVQE
HHHHCCCHHHCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
SAKDEFGYRPGVDDKEPPLLGKPCSTQ
HHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNEMYYVQAADPAILEKGECGGAVTALFKYLLDKNIVDGVLALKKGADVYDAIPAFVTS
CCCEEEEEECCCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCC
SDDLINTAGSLHCAPTMWGGIIKDYLKDVKLAVPVKPCDMRAIVELSKRAQINLDNIYMI
CCHHHHCCCCCEECHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHCEECCCEEEEE
GLNCGGTVPPKVAIEMIKLFYEVDPKDVIKEEIDKGKFIIVLKDGTHKEVKMHDLEDNGY
EECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCC
GRRINCQRCDEKIPRKADLAAGNWGVIGEESGKYTFIEVCSEKGKKLIEDAEKEGYIKKK
CCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEC
TPNSKGLELRAKVEASMLKMGDEYKKKWLEDDYPSFEKWNEYWSRCIKCYGCRDACPVCF
CCCCCCCEEEHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
CKECALEAEYIDRGEIPPNPIMFQGVRMSHMAFSCVNCGQCEDVCPMEIPVARIFHKVQE
HHHHCCCHHHCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
SAKDEFGYRPGVDDKEPPLLGKPCSTQ
HHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]