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The map label for this gene is rpl10e [H]

Identifier: 150399350

GI number: 150399350

Start: 652019

End: 652579

Strand: Reverse

Name: rpl10e [H]

Synonym: Mevan_0599

Alternate gene names: 150399350

Gene position: 652579-652019 (Counterclockwise)

Preceding gene: 150399351

Following gene: 150399346

Centisome position: 37.94

GC content: 38.68

Gene sequence:

>561_bases
ATGGCTTTTTATAAACACGAAAATCACGGAGGAACGATTATGGCACTAAGACCAGCAAGATGTTACAGGGACACTACAAA
AAGGGCATATACTAGAAAAGAATACGTAAGAGCAGTACCTCAACCAAAAGTTGTACACTACGTAATGGGAAACACGAGTG
CTGATTTTCCTGTTGAATTCCACTTGGTTTCAAAAGTTGACATATTGGTAAGACACAATGCTTTAGAAGCTTCAAGGATT
GCAGGAAACAAATATATTTTAAGGGAATGCGGTAGATTAGGATACAAATTCCACATTAGAGTTTATCCGCACCAAATACT
GAGAGAAAATAAAATGGCTGCAGGAGCAGGGGCGGACAGGATTTCCGACGGAATGAGATTATCATTCGGTAAAGCAGTTG
GAACCGCTGCAAAAGTTGCTAAAGGCCAAACAATAATTTCAATCAGTGTAAACCCTGACAAATACAAAGAAGCAAAAGAA
GCATTAAGAAGATGTTCAATGAAGTTGCCTGCAGCATGCAAAGTTGTTGTGGTAAAGGGACAGGACTTAATTAAAGATTA
A

Upstream 100 bases:

>100_bases
AATTAAAAAGCCAATAATATATGTCTTTTTTAAATTTATAGTACATTTTAAGAAATGTTTATATACCATTAGATAGATGT
ATATTGTAGCACGCTTATGA

Downstream 100 bases:

>100_bases
TTATCTCTTTTTTTATATATTTATGCAAATTTTAAAATTATTTAAATAATCTTTTAGAAAATAAAATTTTTAAATAAAAA
AATAGTATTTTATTTATTCA

Product: 50S ribosomal protein L10e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MAFYKHENHGGTIMALRPARCYRDTTKRAYTRKEYVRAVPQPKVVHYVMGNTSADFPVEFHLVSKVDILVRHNALEASRI
AGNKYILRECGRLGYKFHIRVYPHQILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVAKGQTIISISVNPDKYKEAKE
ALRRCSMKLPAACKVVVVKGQDLIKD

Sequences:

>Translated_186_residues
MAFYKHENHGGTIMALRPARCYRDTTKRAYTRKEYVRAVPQPKVVHYVMGNTSADFPVEFHLVSKVDILVRHNALEASRI
AGNKYILRECGRLGYKFHIRVYPHQILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVAKGQTIISISVNPDKYKEAKE
ALRRCSMKLPAACKVVVVKGQDLIKD
>Mature_185_residues
AFYKHENHGGTIMALRPARCYRDTTKRAYTRKEYVRAVPQPKVVHYVMGNTSADFPVEFHLVSKVDILVRHNALEASRIA
GNKYILRECGRLGYKFHIRVYPHQILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVAKGQTIISISVNPDKYKEAKEA
LRRCSMKLPAACKVVVVKGQDLIKD

Specific function: Unknown

COG id: COG0197

COG function: function code J; Ribosomal protein L16/L10E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10e family [H]

Homologues:

Organism=Homo sapiens, GI18152783, Length=175, Percent_Identity=39.4285714285714, Blast_Score=129, Evalue=1e-30,
Organism=Homo sapiens, GI223890243, Length=175, Percent_Identity=38.8571428571429, Blast_Score=127, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI17533037, Length=161, Percent_Identity=37.888198757764, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6323104, Length=169, Percent_Identity=41.4201183431953, Blast_Score=123, Evalue=1e-29,
Organism=Drosophila melanogaster, GI221513696, Length=176, Percent_Identity=41.4772727272727, Blast_Score=130, Evalue=6e-31,
Organism=Drosophila melanogaster, GI221513692, Length=176, Percent_Identity=41.4772727272727, Blast_Score=130, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001197
- InterPro:   IPR016180
- InterPro:   IPR022981
- InterPro:   IPR018255 [H]

Pfam domain/function: PF00252 Ribosomal_L16 [H]

EC number: NA

Molecular weight: Translated: 20833; Mature: 20701

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS01257 RIBOSOMAL_L10E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFYKHENHGGTIMALRPARCYRDTTKRAYTRKEYVRAVPQPKVVHYVMGNTSADFPVEF
CCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEE
HLVSKVDILVRHNALEASRIAGNKYILRECGRLGYKFHIRVYPHQILRENKMAAGAGADR
EEECCEEEEEECCCCCHHHHCCCHHHHHHHHCCCEEEEEEECCHHHHHCCCCCCCCCCHH
ISDGMRLSFGKAVGTAAKVAKGQTIISISVNPDKYKEAKEALRRCSMKLPAACKVVVVKG
HCCCCEEECCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEEEC
QDLIKD
CHHHCC
>Mature Secondary Structure 
AFYKHENHGGTIMALRPARCYRDTTKRAYTRKEYVRAVPQPKVVHYVMGNTSADFPVEF
CCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEE
HLVSKVDILVRHNALEASRIAGNKYILRECGRLGYKFHIRVYPHQILRENKMAAGAGADR
EEECCEEEEEECCCCCHHHHCCCHHHHHHHHCCCEEEEEEECCHHHHHCCCCCCCCCCHH
ISDGMRLSFGKAVGTAAKVAKGQTIISISVNPDKYKEAKEALRRCSMKLPAACKVVVVKG
HCCCCEEECCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEEEC
QDLIKD
CHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA