| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399346
Identifier: 150399346
GI number: 150399346
Start: 647611
End: 648423
Strand: Reverse
Name: 150399346
Synonym: Mevan_0595
Alternate gene names: NA
Gene position: 648423-647611 (Counterclockwise)
Preceding gene: 150399350
Following gene: 150399344
Centisome position: 37.7
GC content: 26.94
Gene sequence:
>813_bases TTGAAAATTGTAAGATTACTGTTTTTAAGCTTATTTTTAGCTATTGGGATTTTTTCGTCAATTAATTATGAAAAAACTGC TGAAAATGTTACAAGTAATGGAATAAACGATCCCGTAATATTAATTCATGATGTAAGCCCGATATATTTTGAAGAATTAA AAGAAATAGACGAAATACTATCTAAAAATGGATATTCTAGTAGGACATATCTTTTTGTGATTGTAAATCATGGAAATACT AACGATATATCTAAAAATGCAGACTTTATAGCGTATTTATTATATTTAAAAACAAAAGGATATATTATTGAACTACACGG TTATGACCATATCGGGCAGGAATTTAACTGCAATGCATCTATTGCAGCAGAAAAACTTGATAAATCACTTTCGATTCTTG AAAATCATACTGGCAGAAAGATATCTTATATAATGCCTCCAAGATACGGGTTATCTGACGAAGCAAAATCCAAAATTTTT GAAAAAAATCTTTCAATAGTTATCGGTTCTTACTATCTTGAAAAAGATTTTCACGAAATTAAAGTTATTAAAATTGAAAA TAAAGAGTATACGTGGTATTTGGAAAAAGAAAATGTTGAAAATCAGCTTTTGAATGCCAAAAATGAGTATATTAATTCTA AAAATCCGTATTTTCTTTCAATACACCCAAAAGCAGTAAATTATGGGGGAGGTATTGAATTTTTGGATAAATTTCTAAGT TTTACGAAAAAAAAGGCAATTCTTAATGAATTACCGGAAAATACTATACTTTATAAGCATATTAAACATAATCATGAAAT AAACGATTATTGA
Upstream 100 bases:
>100_bases ATTTTAGATCATTTAATCCATTAATTTAAATTAATAGATAATATATTATTATATACTTTAAAAAAGCAATTATACAATTA TTCTGTAGTTAGGGGATAAT
Downstream 100 bases:
>100_bases TTATACTTACTCTATTGGATATATCCATATATGACTAAAAATTAATTTTTATACGGATTTTCAAGTTTTTTCTTTATATT GTTCGCTTCTTTTGCTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKIVRLLFLSLFLAIGIFSSINYEKTAENVTSNGINDPVILIHDVSPIYFEELKEIDEILSKNGYSSRTYLFVIVNHGNT NDISKNADFIAYLLYLKTKGYIIELHGYDHIGQEFNCNASIAAEKLDKSLSILENHTGRKISYIMPPRYGLSDEAKSKIF EKNLSIVIGSYYLEKDFHEIKVIKIENKEYTWYLEKENVENQLLNAKNEYINSKNPYFLSIHPKAVNYGGGIEFLDKFLS FTKKKAILNELPENTILYKHIKHNHEINDY
Sequences:
>Translated_270_residues MKIVRLLFLSLFLAIGIFSSINYEKTAENVTSNGINDPVILIHDVSPIYFEELKEIDEILSKNGYSSRTYLFVIVNHGNT NDISKNADFIAYLLYLKTKGYIIELHGYDHIGQEFNCNASIAAEKLDKSLSILENHTGRKISYIMPPRYGLSDEAKSKIF EKNLSIVIGSYYLEKDFHEIKVIKIENKEYTWYLEKENVENQLLNAKNEYINSKNPYFLSIHPKAVNYGGGIEFLDKFLS FTKKKAILNELPENTILYKHIKHNHEINDY >Mature_270_residues MKIVRLLFLSLFLAIGIFSSINYEKTAENVTSNGINDPVILIHDVSPIYFEELKEIDEILSKNGYSSRTYLFVIVNHGNT NDISKNADFIAYLLYLKTKGYIIELHGYDHIGQEFNCNASIAAEKLDKSLSILENHTGRKISYIMPPRYGLSDEAKSKIF EKNLSIVIGSYYLEKDFHEIKVIKIENKEYTWYLEKENVENQLLNAKNEYINSKNPYFLSIHPKAVNYGGGIEFLDKFLS FTKKKAILNELPENTILYKHIKHNHEINDY
Specific function: Unknown
COG id: COG3233
COG function: function code R; Predicted deacetylase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018763 - InterPro: IPR011330 - InterPro: IPR002509 [H]
Pfam domain/function: PF10096 DUF2334 [H]
EC number: NA
Molecular weight: Translated: 31263; Mature: 31263
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVRLLFLSLFLAIGIFSSINYEKTAENVTSNGINDPVILIHDVSPIYFEELKEIDEIL CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHH SKNGYSSRTYLFVIVNHGNTNDISKNADFIAYLLYLKTKGYIIELHGYDHIGQEFNCNAS HCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHEEHHCCCCEEEEECCCCCCCCCCCCCHH IAAEKLDKSLSILENHTGRKISYIMPPRYGLSDEAKSKIFEKNLSIVIGSYYLEKDFHEI HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEHHHHHCCCCEE KVIKIENKEYTWYLEKENVENQLLNAKNEYINSKNPYFLSIHPKAVNYGGGIEFLDKFLS EEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCEECCCCCHHHHHHHHH FTKKKAILNELPENTILYKHIKHNHEINDY HHHHHHHHHHCCCCCEEHHHHHCCCCCCCC >Mature Secondary Structure MKIVRLLFLSLFLAIGIFSSINYEKTAENVTSNGINDPVILIHDVSPIYFEELKEIDEIL CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHH SKNGYSSRTYLFVIVNHGNTNDISKNADFIAYLLYLKTKGYIIELHGYDHIGQEFNCNAS HCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHEEHHCCCCEEEEECCCCCCCCCCCCCHH IAAEKLDKSLSILENHTGRKISYIMPPRYGLSDEAKSKIFEKNLSIVIGSYYLEKDFHEI HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEHHHHHCCCCEE KVIKIENKEYTWYLEKENVENQLLNAKNEYINSKNPYFLSIHPKAVNYGGGIEFLDKFLS EEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCEECCCCCHHHHHHHHH FTKKKAILNELPENTILYKHIKHNHEINDY HHHHHHHHHHCCCCCEEHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]