Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150399338

Identifier: 150399338

GI number: 150399338

Start: 640019

End: 640573

Strand: Reverse

Name: 150399338

Synonym: Mevan_0587

Alternate gene names: NA

Gene position: 640573-640019 (Counterclockwise)

Preceding gene: 150399339

Following gene: 150399337

Centisome position: 37.24

GC content: 33.51

Gene sequence:

>555_bases
ATGCAAGAAAAAATGAAAGAAATTGCGGCAAGAATTCGTGAATTAAGAACTCTTTCAAAAGTATCAATTCAAGAAATGTC
AGATTACTTAAAGACTTCCCCTGAAATTTATGAGCAGTATGAGAGGGGAACTTGTGATATTTCTGCAAGCGTTTTACTTG
AAATTGCACACCGTTTTGACGTTGACATGGGGTTATTATTAACTGGTGAAGAAACAAGAATGCATGTATTTACTGTAACA
AGAAAAGGAAAGGGAATATCTGTTGAAAGAAGAAAGCAGTACAAATACGAAAATTTAGCTGAAAAATTCATCCATAAAAA
GGCAGAACCTTTTATTGTGACGGTTGAGCCAAAAACTGACGGAAAAAAACCTTCAAAAAATTCGCACCCTGGCCAAGAAT
TTAACTATATTCTTGAAGGCTCTATAAAGCTTTATATCCATAATAATGAAGTTATTTTGGAAGAAGGCGATTCAATATTC
TTTGATTCGAACTATGAGCATGCAATGGAAGCTTTAAATGGAAAAGCTGCGAAATTTCTCGCAATTATAATGTAA

Upstream 100 bases:

>100_bases
ATAAATGCTTAACTTTAAGGTTTCAGTAATAATTATCAAACCAAAATTATGGTTTATTAACCCTGATTATGATATTTAAC
TTAATTTAAAGGTTGAGATC

Downstream 100 bases:

>100_bases
TTATGTAAAATTTATTTCGAAAACAAAAAACGGGTAAGATTATGGTGTCCTTACTGGAAAAATTTGTTAAAAAAGTAGAA
TTCAAGTCATACGAGGATTT

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Cupin 2 Domain-Containing Protein; Transcriptional Regulator MerR Family; HTH-Type Transcriptional Regulator; MerR Family Transcriptional Regulator; Phosphate Butyryltransferase; Cupin Domain-Containing Protein; Transcriptional Regulator With Cupin Domain; Epoxidase; Cupin 2 Barrel Domain-Containing Protein; Helix-Turn-Helix Domain-Containing Protein; Regulatory Protein; Helix-Turn-Helix Domain Protein; Cro/CI Family Transcriptional Regulator; Helix-Turn-Helix Family Protein; Cupin Sensor Transcriptional Regulator; Transcription Regulator; Transcriptional Regulator XRE Family With Cupin Sensor; Phosphotransbutyrylase

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MQEKMKEIAARIRELRTLSKVSIQEMSDYLKTSPEIYEQYERGTCDISASVLLEIAHRFDVDMGLLLTGEETRMHVFTVT
RKGKGISVERRKQYKYENLAEKFIHKKAEPFIVTVEPKTDGKKPSKNSHPGQEFNYILEGSIKLYIHNNEVILEEGDSIF
FDSNYEHAMEALNGKAAKFLAIIM

Sequences:

>Translated_184_residues
MQEKMKEIAARIRELRTLSKVSIQEMSDYLKTSPEIYEQYERGTCDISASVLLEIAHRFDVDMGLLLTGEETRMHVFTVT
RKGKGISVERRKQYKYENLAEKFIHKKAEPFIVTVEPKTDGKKPSKNSHPGQEFNYILEGSIKLYIHNNEVILEEGDSIF
FDSNYEHAMEALNGKAAKFLAIIM
>Mature_184_residues
MQEKMKEIAARIRELRTLSKVSIQEMSDYLKTSPEIYEQYERGTCDISASVLLEIAHRFDVDMGLLLTGEETRMHVFTVT
RKGKGISVERRKQYKYENLAEKFIHKKAEPFIVTVEPKTDGKKPSKNSHPGQEFNYILEGSIKLYIHNNEVILEEGDSIF
FDSNYEHAMEALNGKAAKFLAIIM

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21224; Mature: 21224

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEKMKEIAARIRELRTLSKVSIQEMSDYLKTSPEIYEQYERGTCDISASVLLEIAHRFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCC
VDMGLLLTGEETRMHVFTVTRKGKGISVERRKQYKYENLAEKFIHKKAEPFIVTVEPKTD
CCCEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GKKPSKNSHPGQEFNYILEGSIKLYIHNNEVILEEGDSIFFDSNYEHAMEALNGKAAKFL
CCCCCCCCCCCCCEEEEEECEEEEEEECCEEEEECCCEEEECCCHHHHHHHHCCCHHHEE
AIIM
EEEC
>Mature Secondary Structure
MQEKMKEIAARIRELRTLSKVSIQEMSDYLKTSPEIYEQYERGTCDISASVLLEIAHRFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCC
VDMGLLLTGEETRMHVFTVTRKGKGISVERRKQYKYENLAEKFIHKKAEPFIVTVEPKTD
CCCEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GKKPSKNSHPGQEFNYILEGSIKLYIHNNEVILEEGDSIFFDSNYEHAMEALNGKAAKFL
CCCCCCCCCCCCCEEEEEECEEEEEEECCEEEEECCCEEEECCCHHHHHHHHCCCHHHEE
AIIM
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA