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The map label for this gene is yoaA [C]

Identifier: 150399286

GI number: 150399286

Start: 587654

End: 589663

Strand: Reverse

Name: yoaA [C]

Synonym: Mevan_0534

Alternate gene names: 150399286

Gene position: 589663-587654 (Counterclockwise)

Preceding gene: 150399287

Following gene: 150399285

Centisome position: 34.28

GC content: 31.74

Gene sequence:

>2010_bases
ATGAATTTTGGCGAATTTAAAGAATATTCCAATGAAAAATTTCCATATTACAGTAAAAGGCCCCAACAAGAACAATTAAT
GGCTAAAATTTACGAATGCGTACAAAATAAAAAAAATCTTGTTGTAGAGGCACCAACTGGGGTTGGAAAGACTTTATCAT
ACTTAGTTCCAGCACTTTACTTTGCAGAACGTGGAAAACGTATAATAATACTTACGGAAACTATCGACCAACAGGAAAGG
ATTTTTGAAGACTTAAATTCATTAAAGCACAATTTAAAAATATCCTTTATGATGGGAAAGGGTAATTTTTTCTGTAAGTC
AAAAGGAGAAAAAGCAAATACTCTATATTGTCAGTTAAACAAGGGCTGTACATATCGGCCAAATAAAAAACCCGTGTGTG
TTTGCGGAACAAAAAAAGACAAAATTGAATATGAAGGAAATGTTTCATTTTACTGCCCACTATGTATTTGCGGTTACCAA
AAAGCAAAAATAGAATGCTTTGATGCAAATATAATCGTTATGAATAACACGATTTACTATTATCTTAAAGACGAAATTGA
TAAAAAAAAGCAGACTGATATTGTAATTTGTGACGAAGCACATAAACTTGAAGGGAGCATAAGAAATGCTGCAACAATTG
TTATAAGTCCTGATTATGCACTAAAACGGCTTAGATTCATGGCTTACCATTATTCAACAACACGTCTTAGAACGCATTTT
GAAAGGGCCCCTGATGACGATGACGAAATATTTTGGACAATTGTTGAAGATTACGTTACAAAAAATGCATCTGGAAAAGA
CTGTATAAATTCACTTCTGTTTAACGGGTTTCGTATAACTGCATCAGGACTTAAAGAAGACGTTGCAATACTTGGGTCAC
TTCTTGAAGGTTATCGGGAAATAAAGAAAATTAAAAAATTAATTGGGGACTTAAAAGAAAATGAAGAGATAGAAAAAAAA
GATTTAAAATTTAAAATAGAAAATAAATCTTTAACCCCATTAGAACTCCAGTTTATTTCAGATAGGAAAATTTCAGATGT
TCCATTAACTGAATTTTTGGAAAATTTAAATGGTTTAAAAACTATTACTGGAAATTTTGTAATATATAAAAATAATTTTT
CGATACTCTGTGAACCAGTACTTGTTTCAACGTATCTTAATAAGTTATACGGCAGTGCTTCGGTAGTACATTGTTCAGCA
ACACTTGGGAACTTAAATATACATGCAATAAAGACAGGAATGGGAAAAAGTGAAAATTTAATTTTAGATAGCCCATTTTC
AAAGGATAGGAGAAAAATTATTGCATTGAGTGATGGGGAAGATATGAAGTTTAATTCTATGGATATAACTTCACAGGATA
AAAAACGTAAAAAAGCAAATGAAAAATTGTTTAAACTTGTAAATTCAGCAGACGGAAATACTTTAATACTTTTTAAGAGT
TTTGGAGATTTAAAAACTTCATACGAATATTTTTTAGATAATGGATATTCTAGAAATATCTACTGCTATGAATCAGGAAT
GGATGGAAAGGCTGCAAAAAAGCTAAAAGAAGACTTTCAAAAATATGGTGGGCTTCTTTTGGCAACTGGAAGATTTGCAG
AAGGGGTGGATATTCCTGGAGATGCCTTAACATGTGTTATTATCGATAGTTTACCATTTCCCGTTCCAACACCACTTTTA
AAACGGGAACAAGGGCTATTAGAAGAGCGATTAAAGGCAAGGACGGTAAAAGATGCACATTGGAGTGCATTTTTAATGAC
TTCATTTCACATAATGGCAAGAACTGTAATACAAATGATTGGAAGACTCATACGGACTGAAACAGATTACGGGGTAGTAA
TTATCCAAGATAAGCGGTTTAATGAGTGGGTGGGTTTAGAAATGATAAAAAGAAAGTATTTAAAAGATGAATTCATGCAA
ATGACAGTTGAATCTGCATCGAACTACATTCCGCAATTTATGAAAAATATGAAAGAAGATAATTTGAAAAATAGCTCGTT
TTTTAAGTAA

Upstream 100 bases:

>100_bases
TTAGAAAGAAATTTAGGATAATTATATATCCTCATAAAATGCATATTTTAATATTATTTTAACCTAAAAGTATCATCTAT
TTTTTAATTTAAGTGATAAA

Downstream 100 bases:

>100_bases
ATTTAAATATAATCATTTTTTATTTTAATGTAGAAATAACTTTATCTATATCTACAGAATAATTATGTCGTATATTATTT
TCATAGTTGGTTATGTATTT

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 669; Mature: 669

Protein sequence:

>669_residues
MNFGEFKEYSNEKFPYYSKRPQQEQLMAKIYECVQNKKNLVVEAPTGVGKTLSYLVPALYFAERGKRIIILTETIDQQER
IFEDLNSLKHNLKISFMMGKGNFFCKSKGEKANTLYCQLNKGCTYRPNKKPVCVCGTKKDKIEYEGNVSFYCPLCICGYQ
KAKIECFDANIIVMNNTIYYYLKDEIDKKKQTDIVICDEAHKLEGSIRNAATIVISPDYALKRLRFMAYHYSTTRLRTHF
ERAPDDDDEIFWTIVEDYVTKNASGKDCINSLLFNGFRITASGLKEDVAILGSLLEGYREIKKIKKLIGDLKENEEIEKK
DLKFKIENKSLTPLELQFISDRKISDVPLTEFLENLNGLKTITGNFVIYKNNFSILCEPVLVSTYLNKLYGSASVVHCSA
TLGNLNIHAIKTGMGKSENLILDSPFSKDRRKIIALSDGEDMKFNSMDITSQDKKRKKANEKLFKLVNSADGNTLILFKS
FGDLKTSYEYFLDNGYSRNIYCYESGMDGKAAKKLKEDFQKYGGLLLATGRFAEGVDIPGDALTCVIIDSLPFPVPTPLL
KREQGLLEERLKARTVKDAHWSAFLMTSFHIMARTVIQMIGRLIRTETDYGVVIIQDKRFNEWVGLEMIKRKYLKDEFMQ
MTVESASNYIPQFMKNMKEDNLKNSSFFK

Sequences:

>Translated_669_residues
MNFGEFKEYSNEKFPYYSKRPQQEQLMAKIYECVQNKKNLVVEAPTGVGKTLSYLVPALYFAERGKRIIILTETIDQQER
IFEDLNSLKHNLKISFMMGKGNFFCKSKGEKANTLYCQLNKGCTYRPNKKPVCVCGTKKDKIEYEGNVSFYCPLCICGYQ
KAKIECFDANIIVMNNTIYYYLKDEIDKKKQTDIVICDEAHKLEGSIRNAATIVISPDYALKRLRFMAYHYSTTRLRTHF
ERAPDDDDEIFWTIVEDYVTKNASGKDCINSLLFNGFRITASGLKEDVAILGSLLEGYREIKKIKKLIGDLKENEEIEKK
DLKFKIENKSLTPLELQFISDRKISDVPLTEFLENLNGLKTITGNFVIYKNNFSILCEPVLVSTYLNKLYGSASVVHCSA
TLGNLNIHAIKTGMGKSENLILDSPFSKDRRKIIALSDGEDMKFNSMDITSQDKKRKKANEKLFKLVNSADGNTLILFKS
FGDLKTSYEYFLDNGYSRNIYCYESGMDGKAAKKLKEDFQKYGGLLLATGRFAEGVDIPGDALTCVIIDSLPFPVPTPLL
KREQGLLEERLKARTVKDAHWSAFLMTSFHIMARTVIQMIGRLIRTETDYGVVIIQDKRFNEWVGLEMIKRKYLKDEFMQ
MTVESASNYIPQFMKNMKEDNLKNSSFFK
>Mature_669_residues
MNFGEFKEYSNEKFPYYSKRPQQEQLMAKIYECVQNKKNLVVEAPTGVGKTLSYLVPALYFAERGKRIIILTETIDQQER
IFEDLNSLKHNLKISFMMGKGNFFCKSKGEKANTLYCQLNKGCTYRPNKKPVCVCGTKKDKIEYEGNVSFYCPLCICGYQ
KAKIECFDANIIVMNNTIYYYLKDEIDKKKQTDIVICDEAHKLEGSIRNAATIVISPDYALKRLRFMAYHYSTTRLRTHF
ERAPDDDDEIFWTIVEDYVTKNASGKDCINSLLFNGFRITASGLKEDVAILGSLLEGYREIKKIKKLIGDLKENEEIEKK
DLKFKIENKSLTPLELQFISDRKISDVPLTEFLENLNGLKTITGNFVIYKNNFSILCEPVLVSTYLNKLYGSASVVHCSA
TLGNLNIHAIKTGMGKSENLILDSPFSKDRRKIIALSDGEDMKFNSMDITSQDKKRKKANEKLFKLVNSADGNTLILFKS
FGDLKTSYEYFLDNGYSRNIYCYESGMDGKAAKKLKEDFQKYGGLLLATGRFAEGVDIPGDALTCVIIDSLPFPVPTPLL
KREQGLLEERLKARTVKDAHWSAFLMTSFHIMARTVIQMIGRLIRTETDYGVVIIQDKRFNEWVGLEMIKRKYLKDEFMQ
MTVESASNYIPQFMKNMKEDNLKNSSFFK

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=257, Percent_Identity=28.4046692607004, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 76754; Mature: 76754

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFGEFKEYSNEKFPYYSKRPQQEQLMAKIYECVQNKKNLVVEAPTGVGKTLSYLVPALY
CCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH
FAERGKRIIILTETIDQQERIFEDLNSLKHNLKISFMMGKGNFFCKSKGEKANTLYCQLN
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEEEEEECCCEEECCCCCCCCEEEEEEC
KGCTYRPNKKPVCVCGTKKDKIEYEGNVSFYCPLCICGYQKAKIECFDANIIVMNNTIYY
CCCCCCCCCCCEEEECCCCCCEEECCCEEEEEEEEEECCCCCEEEEEECEEEEEECEEEE
YLKDEIDKKKQTDIVICDEAHKLEGSIRNAATIVISPDYALKRLRFMAYHYSTTRLRTHF
EEECCCCCCCCCCEEEECCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHEEHHHHHHHHH
ERAPDDDDEIFWTIVEDYVTKNASGKDCINSLLFNGFRITASGLKEDVAILGSLLEGYRE
HCCCCCCCCEEHEEHHHHHCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHH
IKKIKKLIGDLKENEEIEKKDLKFKIENKSLTPLELQFISDRKISDVPLTEFLENLNGLK
HHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCE
TITGNFVIYKNNFSILCEPVLVSTYLNKLYGSASVVHCSATLGNLNIHAIKTGMGKSENL
EEECCEEEEECCCEEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCCCCE
ILDSPFSKDRRKIIALSDGEDMKFNSMDITSQDKKRKKANEKLFKLVNSADGNTLILFKS
EEECCCCCCCCEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
FGDLKTSYEYFLDNGYSRNIYCYESGMDGKAAKKLKEDFQKYGGLLLATGRFAEGVDIPG
CCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC
DALTCVIIDSLPFPVPTPLLKREQGLLEERLKARTVKDAHWSAFLMTSFHIMARTVIQMI
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GRLIRTETDYGVVIIQDKRFNEWVGLEMIKRKYLKDEFMQMTVESASNYIPQFMKNMKED
HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NLKNSSFFK
CCCCCCCCC
>Mature Secondary Structure
MNFGEFKEYSNEKFPYYSKRPQQEQLMAKIYECVQNKKNLVVEAPTGVGKTLSYLVPALY
CCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH
FAERGKRIIILTETIDQQERIFEDLNSLKHNLKISFMMGKGNFFCKSKGEKANTLYCQLN
HHHCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEEEEEECCCEEECCCCCCCCEEEEEEC
KGCTYRPNKKPVCVCGTKKDKIEYEGNVSFYCPLCICGYQKAKIECFDANIIVMNNTIYY
CCCCCCCCCCCEEEECCCCCCEEECCCEEEEEEEEEECCCCCEEEEEECEEEEEECEEEE
YLKDEIDKKKQTDIVICDEAHKLEGSIRNAATIVISPDYALKRLRFMAYHYSTTRLRTHF
EEECCCCCCCCCCEEEECCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHEEHHHHHHHHH
ERAPDDDDEIFWTIVEDYVTKNASGKDCINSLLFNGFRITASGLKEDVAILGSLLEGYRE
HCCCCCCCCEEHEEHHHHHCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHH
IKKIKKLIGDLKENEEIEKKDLKFKIENKSLTPLELQFISDRKISDVPLTEFLENLNGLK
HHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCE
TITGNFVIYKNNFSILCEPVLVSTYLNKLYGSASVVHCSATLGNLNIHAIKTGMGKSENL
EEECCEEEEECCCEEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCCCCE
ILDSPFSKDRRKIIALSDGEDMKFNSMDITSQDKKRKKANEKLFKLVNSADGNTLILFKS
EEECCCCCCCCEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
FGDLKTSYEYFLDNGYSRNIYCYESGMDGKAAKKLKEDFQKYGGLLLATGRFAEGVDIPG
CCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC
DALTCVIIDSLPFPVPTPLLKREQGLLEERLKARTVKDAHWSAFLMTSFHIMARTVIQMI
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GRLIRTETDYGVVIIQDKRFNEWVGLEMIKRKYLKDEFMQMTVESASNYIPQFMKNMKED
HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NLKNSSFFK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]