Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150399285

Identifier: 150399285

GI number: 150399285

Start: 585675

End: 586922

Strand: Reverse

Name: 150399285

Synonym: Mevan_0533

Alternate gene names: NA

Gene position: 586922-585675 (Counterclockwise)

Preceding gene: 150399286

Following gene: 150399284

Centisome position: 34.12

GC content: 36.94

Gene sequence:

>1248_bases
ATGTATATGAGAGAAATTGAATTAAAAGGACATATAATTGATAGTTTTATTCTTGCAAAAGTATTTGATAAGACTTTAGA
ACTTGGCGGAGATTACAAGGTTTTGGAGTTTGATATAGGGAAGAAAAAAACCGATACTTCTTATGCAAAACTTTTGATTT
CAGGGGACACTCAAGAACACCTTGATCAGATACTTGAATCACTTCAAAATGTCGGTGCAAACATTCCTGAAATAGAAAAT
GCCAATTTAAAAAAGGCTTTAAAGGATAGTGTATTGCCTGATGGATTTTATTCAACTACAAACCATCCCACACACGTTAA
AATAAATGATGAGTGGATTGAGGTAGCAAATCCAAAAATGGATGCAGTAATTGTTGTTTATCCTGAGGAAAAACTTGCAG
AAACAAAAGTAATGCGAAAAGTTAAGGCCGGAGATTACGTAGTAGTTGGACACAACGGAATACGAGTTATTCCTCCAGAA
AAATCAAGGGAAGCAGGGCAGCTTTTTGAATTTATGAATTCAGAAGTATCCTCAGAAAAGCCTAAAGAAGCTATTATTCG
AAGAATTGCAGAAGAAATGCATGAAATTCGTGAGGAATATAAAAAAACCGGAAAAGGTGGAATTGCAATTGTTGGGGGGC
CTGCAATAATTCATACAGGTGGGGGCGGAGCATTAGCGAAGATGGTCGAACTTGGATATATTCAGGCAATTTTGGCAGGA
AATGCACTCGCAACTCATGATATTGAATCTGCTCTTTATGGAACTTCCCTTGGTGTAGACATAAAAACGGCAAAACCCGT
AACTGGAGGGCATAAGCACCACATATATGCGATAAACACGATAATCGATGCAGGAAGTATAAAAGATGCAGTTGAACAGG
GACGGTTAAAAGAAGGGATAATGTATCAATGTATACAAAATAACGTTCCATACGTCCTTGCAGGAAGTATTCGTGATGAT
GGCCCAATTCCTGATGTTATAACCGATGTTATGGTTGCACAGGATGAAATGAGGCGTTCTGTAATGGATAAAAAAATGGT
AATAATGCTTTCTACATTATTACATTCGGTTGCAACGGGTAATTTAATGCCTTCATACATTAAAACAGTTTGTGTAGATA
TCCAACCGTCAACAGTCACTAAATTAATGGACAGGGGAACTTCACAGGCAATAGGGGTAGTTACTGATGTAGGGGTATTT
TTAGTACTGCTTTTAAACGAACTTGAAAAACTCGAATCACGAAAATAA

Upstream 100 bases:

>100_bases
TTATATTCTTAATCTAATTCGAAAAATTATATATTTAAGCAAGACATTAAAATCTTAATATTAAAATAATGGACTTTATT
TTTTTACTTTAGGTGGTTTT

Downstream 100 bases:

>100_bases
GTAACTATTCTTGAGGAACATGATTATGTCTGAAACAAAAGTATCAAAAGAATTGATTGTAAAAGCGATTGAAACCATCT
CAAAAACTAAAAAAGAATTT

Product: LOR/SDH bifunctional protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MYMREIELKGHIIDSFILAKVFDKTLELGGDYKVLEFDIGKKKTDTSYAKLLISGDTQEHLDQILESLQNVGANIPEIEN
ANLKKALKDSVLPDGFYSTTNHPTHVKINDEWIEVANPKMDAVIVVYPEEKLAETKVMRKVKAGDYVVVGHNGIRVIPPE
KSREAGQLFEFMNSEVSSEKPKEAIIRRIAEEMHEIREEYKKTGKGGIAIVGGPAIIHTGGGGALAKMVELGYIQAILAG
NALATHDIESALYGTSLGVDIKTAKPVTGGHKHHIYAINTIIDAGSIKDAVEQGRLKEGIMYQCIQNNVPYVLAGSIRDD
GPIPDVITDVMVAQDEMRRSVMDKKMVIMLSTLLHSVATGNLMPSYIKTVCVDIQPSTVTKLMDRGTSQAIGVVTDVGVF
LVLLLNELEKLESRK

Sequences:

>Translated_415_residues
MYMREIELKGHIIDSFILAKVFDKTLELGGDYKVLEFDIGKKKTDTSYAKLLISGDTQEHLDQILESLQNVGANIPEIEN
ANLKKALKDSVLPDGFYSTTNHPTHVKINDEWIEVANPKMDAVIVVYPEEKLAETKVMRKVKAGDYVVVGHNGIRVIPPE
KSREAGQLFEFMNSEVSSEKPKEAIIRRIAEEMHEIREEYKKTGKGGIAIVGGPAIIHTGGGGALAKMVELGYIQAILAG
NALATHDIESALYGTSLGVDIKTAKPVTGGHKHHIYAINTIIDAGSIKDAVEQGRLKEGIMYQCIQNNVPYVLAGSIRDD
GPIPDVITDVMVAQDEMRRSVMDKKMVIMLSTLLHSVATGNLMPSYIKTVCVDIQPSTVTKLMDRGTSQAIGVVTDVGVF
LVLLLNELEKLESRK
>Mature_415_residues
MYMREIELKGHIIDSFILAKVFDKTLELGGDYKVLEFDIGKKKTDTSYAKLLISGDTQEHLDQILESLQNVGANIPEIEN
ANLKKALKDSVLPDGFYSTTNHPTHVKINDEWIEVANPKMDAVIVVYPEEKLAETKVMRKVKAGDYVVVGHNGIRVIPPE
KSREAGQLFEFMNSEVSSEKPKEAIIRRIAEEMHEIREEYKKTGKGGIAIVGGPAIIHTGGGGALAKMVELGYIQAILAG
NALATHDIESALYGTSLGVDIKTAKPVTGGHKHHIYAINTIIDAGSIKDAVEQGRLKEGIMYQCIQNNVPYVLAGSIRDD
GPIPDVITDVMVAQDEMRRSVMDKKMVIMLSTLLHSVATGNLMPSYIKTVCVDIQPSTVTKLMDRGTSQAIGVVTDVGVF
LVLLLNELEKLESRK

Specific function: Unknown

COG id: COG1915

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005239
- InterPro:   IPR007545 [H]

Pfam domain/function: PF04455 Saccharop_dh_N [H]

EC number: NA

Molecular weight: Translated: 45533; Mature: 45533

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMREIELKGHIIDSFILAKVFDKTLELGGDYKVLEFDIGKKKTDTSYAKLLISGDTQEH
CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHEEEEECCCCHHH
LDQILESLQNVGANIPEIENANLKKALKDSVLPDGFYSTTNHPTHVKINDEWIEVANPKM
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCC
DAVIVVYPEEKLAETKVMRKVKAGDYVVVGHNGIRVIPPEKSREAGQLFEFMNSEVSSEK
CEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCC
PKEAIIRRIAEEMHEIREEYKKTGKGGIAIVGGPAIIHTGGGGALAKMVELGYIQAILAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHC
NALATHDIESALYGTSLGVDIKTAKPVTGGHKHHIYAINTIIDAGSIKDAVEQGRLKEGI
CCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCHHHHH
MYQCIQNNVPYVLAGSIRDDGPIPDVITDVMVAQDEMRRSVMDKKMVIMLSTLLHSVATG
HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NLMPSYIKTVCVDIQPSTVTKLMDRGTSQAIGVVTDVGVFLVLLLNELEKLESRK
CCCHHHHHHHEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYMREIELKGHIIDSFILAKVFDKTLELGGDYKVLEFDIGKKKTDTSYAKLLISGDTQEH
CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHEEEEECCCCHHH
LDQILESLQNVGANIPEIENANLKKALKDSVLPDGFYSTTNHPTHVKINDEWIEVANPKM
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCC
DAVIVVYPEEKLAETKVMRKVKAGDYVVVGHNGIRVIPPEKSREAGQLFEFMNSEVSSEK
CEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCC
PKEAIIRRIAEEMHEIREEYKKTGKGGIAIVGGPAIIHTGGGGALAKMVELGYIQAILAG
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHC
NALATHDIESALYGTSLGVDIKTAKPVTGGHKHHIYAINTIIDAGSIKDAVEQGRLKEGI
CCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCHHHHH
MYQCIQNNVPYVLAGSIRDDGPIPDVITDVMVAQDEMRRSVMDKKMVIMLSTLLHSVATG
HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NLMPSYIKTVCVDIQPSTVTKLMDRGTSQAIGVVTDVGVFLVLLLNELEKLESRK
CCCHHHHHHHEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]