| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150399285
Identifier: 150399285
GI number: 150399285
Start: 585675
End: 586922
Strand: Reverse
Name: 150399285
Synonym: Mevan_0533
Alternate gene names: NA
Gene position: 586922-585675 (Counterclockwise)
Preceding gene: 150399286
Following gene: 150399284
Centisome position: 34.12
GC content: 36.94
Gene sequence:
>1248_bases ATGTATATGAGAGAAATTGAATTAAAAGGACATATAATTGATAGTTTTATTCTTGCAAAAGTATTTGATAAGACTTTAGA ACTTGGCGGAGATTACAAGGTTTTGGAGTTTGATATAGGGAAGAAAAAAACCGATACTTCTTATGCAAAACTTTTGATTT CAGGGGACACTCAAGAACACCTTGATCAGATACTTGAATCACTTCAAAATGTCGGTGCAAACATTCCTGAAATAGAAAAT GCCAATTTAAAAAAGGCTTTAAAGGATAGTGTATTGCCTGATGGATTTTATTCAACTACAAACCATCCCACACACGTTAA AATAAATGATGAGTGGATTGAGGTAGCAAATCCAAAAATGGATGCAGTAATTGTTGTTTATCCTGAGGAAAAACTTGCAG AAACAAAAGTAATGCGAAAAGTTAAGGCCGGAGATTACGTAGTAGTTGGACACAACGGAATACGAGTTATTCCTCCAGAA AAATCAAGGGAAGCAGGGCAGCTTTTTGAATTTATGAATTCAGAAGTATCCTCAGAAAAGCCTAAAGAAGCTATTATTCG AAGAATTGCAGAAGAAATGCATGAAATTCGTGAGGAATATAAAAAAACCGGAAAAGGTGGAATTGCAATTGTTGGGGGGC CTGCAATAATTCATACAGGTGGGGGCGGAGCATTAGCGAAGATGGTCGAACTTGGATATATTCAGGCAATTTTGGCAGGA AATGCACTCGCAACTCATGATATTGAATCTGCTCTTTATGGAACTTCCCTTGGTGTAGACATAAAAACGGCAAAACCCGT AACTGGAGGGCATAAGCACCACATATATGCGATAAACACGATAATCGATGCAGGAAGTATAAAAGATGCAGTTGAACAGG GACGGTTAAAAGAAGGGATAATGTATCAATGTATACAAAATAACGTTCCATACGTCCTTGCAGGAAGTATTCGTGATGAT GGCCCAATTCCTGATGTTATAACCGATGTTATGGTTGCACAGGATGAAATGAGGCGTTCTGTAATGGATAAAAAAATGGT AATAATGCTTTCTACATTATTACATTCGGTTGCAACGGGTAATTTAATGCCTTCATACATTAAAACAGTTTGTGTAGATA TCCAACCGTCAACAGTCACTAAATTAATGGACAGGGGAACTTCACAGGCAATAGGGGTAGTTACTGATGTAGGGGTATTT TTAGTACTGCTTTTAAACGAACTTGAAAAACTCGAATCACGAAAATAA
Upstream 100 bases:
>100_bases TTATATTCTTAATCTAATTCGAAAAATTATATATTTAAGCAAGACATTAAAATCTTAATATTAAAATAATGGACTTTATT TTTTTACTTTAGGTGGTTTT
Downstream 100 bases:
>100_bases GTAACTATTCTTGAGGAACATGATTATGTCTGAAACAAAAGTATCAAAAGAATTGATTGTAAAAGCGATTGAAACCATCT CAAAAACTAAAAAAGAATTT
Product: LOR/SDH bifunctional protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MYMREIELKGHIIDSFILAKVFDKTLELGGDYKVLEFDIGKKKTDTSYAKLLISGDTQEHLDQILESLQNVGANIPEIEN ANLKKALKDSVLPDGFYSTTNHPTHVKINDEWIEVANPKMDAVIVVYPEEKLAETKVMRKVKAGDYVVVGHNGIRVIPPE KSREAGQLFEFMNSEVSSEKPKEAIIRRIAEEMHEIREEYKKTGKGGIAIVGGPAIIHTGGGGALAKMVELGYIQAILAG NALATHDIESALYGTSLGVDIKTAKPVTGGHKHHIYAINTIIDAGSIKDAVEQGRLKEGIMYQCIQNNVPYVLAGSIRDD GPIPDVITDVMVAQDEMRRSVMDKKMVIMLSTLLHSVATGNLMPSYIKTVCVDIQPSTVTKLMDRGTSQAIGVVTDVGVF LVLLLNELEKLESRK
Sequences:
>Translated_415_residues MYMREIELKGHIIDSFILAKVFDKTLELGGDYKVLEFDIGKKKTDTSYAKLLISGDTQEHLDQILESLQNVGANIPEIEN ANLKKALKDSVLPDGFYSTTNHPTHVKINDEWIEVANPKMDAVIVVYPEEKLAETKVMRKVKAGDYVVVGHNGIRVIPPE KSREAGQLFEFMNSEVSSEKPKEAIIRRIAEEMHEIREEYKKTGKGGIAIVGGPAIIHTGGGGALAKMVELGYIQAILAG NALATHDIESALYGTSLGVDIKTAKPVTGGHKHHIYAINTIIDAGSIKDAVEQGRLKEGIMYQCIQNNVPYVLAGSIRDD GPIPDVITDVMVAQDEMRRSVMDKKMVIMLSTLLHSVATGNLMPSYIKTVCVDIQPSTVTKLMDRGTSQAIGVVTDVGVF LVLLLNELEKLESRK >Mature_415_residues MYMREIELKGHIIDSFILAKVFDKTLELGGDYKVLEFDIGKKKTDTSYAKLLISGDTQEHLDQILESLQNVGANIPEIEN ANLKKALKDSVLPDGFYSTTNHPTHVKINDEWIEVANPKMDAVIVVYPEEKLAETKVMRKVKAGDYVVVGHNGIRVIPPE KSREAGQLFEFMNSEVSSEKPKEAIIRRIAEEMHEIREEYKKTGKGGIAIVGGPAIIHTGGGGALAKMVELGYIQAILAG NALATHDIESALYGTSLGVDIKTAKPVTGGHKHHIYAINTIIDAGSIKDAVEQGRLKEGIMYQCIQNNVPYVLAGSIRDD GPIPDVITDVMVAQDEMRRSVMDKKMVIMLSTLLHSVATGNLMPSYIKTVCVDIQPSTVTKLMDRGTSQAIGVVTDVGVF LVLLLNELEKLESRK
Specific function: Unknown
COG id: COG1915
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005239 - InterPro: IPR007545 [H]
Pfam domain/function: PF04455 Saccharop_dh_N [H]
EC number: NA
Molecular weight: Translated: 45533; Mature: 45533
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMREIELKGHIIDSFILAKVFDKTLELGGDYKVLEFDIGKKKTDTSYAKLLISGDTQEH CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHEEEEECCCCHHH LDQILESLQNVGANIPEIENANLKKALKDSVLPDGFYSTTNHPTHVKINDEWIEVANPKM HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCC DAVIVVYPEEKLAETKVMRKVKAGDYVVVGHNGIRVIPPEKSREAGQLFEFMNSEVSSEK CEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCC PKEAIIRRIAEEMHEIREEYKKTGKGGIAIVGGPAIIHTGGGGALAKMVELGYIQAILAG HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHC NALATHDIESALYGTSLGVDIKTAKPVTGGHKHHIYAINTIIDAGSIKDAVEQGRLKEGI CCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCHHHHH MYQCIQNNVPYVLAGSIRDDGPIPDVITDVMVAQDEMRRSVMDKKMVIMLSTLLHSVATG HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NLMPSYIKTVCVDIQPSTVTKLMDRGTSQAIGVVTDVGVFLVLLLNELEKLESRK CCCHHHHHHHEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYMREIELKGHIIDSFILAKVFDKTLELGGDYKVLEFDIGKKKTDTSYAKLLISGDTQEH CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHEEEEECCCCHHH LDQILESLQNVGANIPEIENANLKKALKDSVLPDGFYSTTNHPTHVKINDEWIEVANPKM HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCC DAVIVVYPEEKLAETKVMRKVKAGDYVVVGHNGIRVIPPEKSREAGQLFEFMNSEVSSEK CEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCC PKEAIIRRIAEEMHEIREEYKKTGKGGIAIVGGPAIIHTGGGGALAKMVELGYIQAILAG HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHC NALATHDIESALYGTSLGVDIKTAKPVTGGHKHHIYAINTIIDAGSIKDAVEQGRLKEGI CCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCHHHHHHHHCCHHHHH MYQCIQNNVPYVLAGSIRDDGPIPDVITDVMVAQDEMRRSVMDKKMVIMLSTLLHSVATG HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NLMPSYIKTVCVDIQPSTVTKLMDRGTSQAIGVVTDVGVFLVLLLNELEKLESRK CCCHHHHHHHEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]