| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is gltX
Identifier: 150399092
GI number: 150399092
Start: 386336
End: 388003
Strand: Reverse
Name: gltX
Synonym: Mevan_0338
Alternate gene names: 150399092
Gene position: 388003-386336 (Counterclockwise)
Preceding gene: 150399093
Following gene: 150399091
Centisome position: 22.56
GC content: 33.69
Gene sequence:
>1668_bases ATGAAAGATACAGTAATGGTTTATTTACTAGAAAACTCAATTAAATTTAACGGAAAACCAAATCCAAAGGCAGTAATGGG TAAAATTCTTGGTGGGAATCCCGATTTAAGAAACAGGGTTAATGAACTAAATGAAGTTATTTCAAAGGTTTTGAAAGAAA TTGAAGTAATGTCTCTTGAAGAACAGCAAATTAAATTAAATGAAATTGCTCCGGAAGGTTTAGTGCAAAAAACTGAACGA AAAAGAAAAGAAATTGAATTAAAAAATGCAAAAGATAAAGTTGTAATGAGATTTGCACCAAACCCCTCTGGACCATTACA TATCGGGCATGCAAGAGCGTCTGTATTAAACGATTTTTTTGCTAAAAAATACAATGGAAAGTTAATTTTAAGGCTTGAAG ACACTGATGCAAAACGAGTTCTCCCAGAAGCTTATGAAATGATTGAAGAAGACCTAAAATGGCTTGGAATTAAGGTTGAC GAAGTAATTATCCAATCAGAAAGACTTGAAATTTACTATGGATACGGCAGAAAATTAATCGAAATGAGTTACGCTTATGT TTGTGACTGTAATCCTGAAGAATTTAAGGAATTACGGGAAAAAGGAATCCCTTGTAAATGTAGGGAAACAACGCCAGAAA CAAATCTTAAACTATGGGAAAAAATGCTTGCCGGAGAACTGGATAACGTTGCAGTAAGACTTAAAACGGATATTGGGCAC AAAAATCCGTCAATTAGGGATTTCCCGATATTTAGAATTGAAAAAACGCCCCACCCTAAAAATGGAACAAAATACCACGT ATATCCTTTAATGAATCTTTCAGTAACGATTGACGACCACCTGATGGGAATGACCCACGTATTACGGGGAAAAGACCATA TTATAAATACTGAAAAGCAGGAATATATTTACAAGTATTTTGGATGGGAATCTCCCGAATACATTCACTACGGAATTTTA AAAATTGAGGGGCCTGTTTTAAGTACGTCAAAAATGCATACAGGAATTTTAAGCGGAGAATATTCCGGATGGGACGATGC ACGGCTTGGTACACTAAGGGCCCTTAAAAAAAGAGGAATAAAGCCAGAAGCACTATATAAGTTAATGGTTGAAATTGGAA TAAAGCAAGCAGACGTTAAATTTGCATGGGAAAACTTAAATGCAGCAAATAAGGAAATAATCGATAAAGATGCGAAAAGA TTTTTCTTTGTCGATAGCCCTAAAAAAGTTATAATTACAGGTTTTAAAAACAAAAAAATTAATTTAAGAATGCACCCTGA TAGAAGCGACTTTGGAAACCGGGAACTTTTGTTTGATGGCGAAATTTACGTTTCAGACGACCTTGAAGCAGGAAAAATGT ATAGGTTAATGGAATTATTTAATATCGTTGTAGAAAAGATTGAAAACGGTGTAATTTATGCCCATTATGATAGTGATGAC ATAAGCGTTGCAAGAACAAACAAAGCAAATATTATTCACTGGATACCGATAAAAGACAGTGTAAAAGTAACCGTAATTGA TGAAAATGCAGAAAAAATTGAAGGATTTGCAGAAAAAGACTTTTTAATTACGGAAGAGGATGATTTTGTTCAATTTGAGA GATTTGGATTTGTTAGGATTGACGAAAAATTAGATGATGGATATATCTGCTACTATACTCACAAATAA
Upstream 100 bases:
>100_bases TAATGGCTAAATCGGTAAGATTTATAAACTAAACCACATTACATTTAAGAGATTACTTTTCAAAAGGATTTAATAAAGGA CACCAAAAATAGTGATAATT
Downstream 100 bases:
>100_bases TTTTTTTAGTTATTTTTTACTATCTAATATACTTACGTTTATTTTTGAAATTAAAGGATATTTAAAATTTAAAATTACTT ATGAGTATTTATAATTAAAT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MKDTVMVYLLENSIKFNGKPNPKAVMGKILGGNPDLRNRVNELNEVISKVLKEIEVMSLEEQQIKLNEIAPEGLVQKTER KRKEIELKNAKDKVVMRFAPNPSGPLHIGHARASVLNDFFAKKYNGKLILRLEDTDAKRVLPEAYEMIEEDLKWLGIKVD EVIIQSERLEIYYGYGRKLIEMSYAYVCDCNPEEFKELREKGIPCKCRETTPETNLKLWEKMLAGELDNVAVRLKTDIGH KNPSIRDFPIFRIEKTPHPKNGTKYHVYPLMNLSVTIDDHLMGMTHVLRGKDHIINTEKQEYIYKYFGWESPEYIHYGIL KIEGPVLSTSKMHTGILSGEYSGWDDARLGTLRALKKRGIKPEALYKLMVEIGIKQADVKFAWENLNAANKEIIDKDAKR FFFVDSPKKVIITGFKNKKINLRMHPDRSDFGNRELLFDGEIYVSDDLEAGKMYRLMELFNIVVEKIENGVIYAHYDSDD ISVARTNKANIIHWIPIKDSVKVTVIDENAEKIEGFAEKDFLITEEDDFVQFERFGFVRIDEKLDDGYICYYTHK
Sequences:
>Translated_555_residues MKDTVMVYLLENSIKFNGKPNPKAVMGKILGGNPDLRNRVNELNEVISKVLKEIEVMSLEEQQIKLNEIAPEGLVQKTER KRKEIELKNAKDKVVMRFAPNPSGPLHIGHARASVLNDFFAKKYNGKLILRLEDTDAKRVLPEAYEMIEEDLKWLGIKVD EVIIQSERLEIYYGYGRKLIEMSYAYVCDCNPEEFKELREKGIPCKCRETTPETNLKLWEKMLAGELDNVAVRLKTDIGH KNPSIRDFPIFRIEKTPHPKNGTKYHVYPLMNLSVTIDDHLMGMTHVLRGKDHIINTEKQEYIYKYFGWESPEYIHYGIL KIEGPVLSTSKMHTGILSGEYSGWDDARLGTLRALKKRGIKPEALYKLMVEIGIKQADVKFAWENLNAANKEIIDKDAKR FFFVDSPKKVIITGFKNKKINLRMHPDRSDFGNRELLFDGEIYVSDDLEAGKMYRLMELFNIVVEKIENGVIYAHYDSDD ISVARTNKANIIHWIPIKDSVKVTVIDENAEKIEGFAEKDFLITEEDDFVQFERFGFVRIDEKLDDGYICYYTHK >Mature_555_residues MKDTVMVYLLENSIKFNGKPNPKAVMGKILGGNPDLRNRVNELNEVISKVLKEIEVMSLEEQQIKLNEIAPEGLVQKTER KRKEIELKNAKDKVVMRFAPNPSGPLHIGHARASVLNDFFAKKYNGKLILRLEDTDAKRVLPEAYEMIEEDLKWLGIKVD EVIIQSERLEIYYGYGRKLIEMSYAYVCDCNPEEFKELREKGIPCKCRETTPETNLKLWEKMLAGELDNVAVRLKTDIGH KNPSIRDFPIFRIEKTPHPKNGTKYHVYPLMNLSVTIDDHLMGMTHVLRGKDHIINTEKQEYIYKYFGWESPEYIHYGIL KIEGPVLSTSKMHTGILSGEYSGWDDARLGTLRALKKRGIKPEALYKLMVEIGIKQADVKFAWENLNAANKEIIDKDAKR FFFVDSPKKVIITGFKNKKINLRMHPDRSDFGNRELLFDGEIYVSDDLEAGKMYRLMELFNIVVEKIENGVIYAHYDSDD ISVARTNKANIIHWIPIKDSVKVTVIDENAEKIEGFAEKDFLITEEDDFVQFERFGFVRIDEKLDDGYICYYTHK
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI62241042, Length=409, Percent_Identity=31.2958435207824, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI4826960, Length=327, Percent_Identity=29.3577981651376, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI134288884, Length=264, Percent_Identity=32.9545454545455, Blast_Score=141, Evalue=2e-33, Organism=Escherichia coli, GI1786895, Length=512, Percent_Identity=26.953125, Blast_Score=180, Evalue=3e-46, Organism=Escherichia coli, GI1788743, Length=311, Percent_Identity=28.9389067524116, Blast_Score=122, Evalue=8e-29, Organism=Escherichia coli, GI226510925, Length=300, Percent_Identity=29, Blast_Score=101, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17511007, Length=470, Percent_Identity=29.1489361702128, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17543332, Length=501, Percent_Identity=26.1477045908184, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71993394, Length=311, Percent_Identity=30.2250803858521, Blast_Score=117, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6324742, Length=440, Percent_Identity=28.4090909090909, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6321192, Length=526, Percent_Identity=28.1368821292776, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6324540, Length=296, Percent_Identity=34.1216216216216, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI24649466, Length=539, Percent_Identity=29.4990723562152, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI17864488, Length=523, Percent_Identity=25.8126195028681, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI24665321, Length=330, Percent_Identity=31.8181818181818, Blast_Score=141, Evalue=1e-33,
Paralogues:
None
Copy number: 520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1200 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_METVS (A6UP25)
Other databases:
- EMBL: CP000742 - RefSeq: YP_001322859.1 - ProteinModelPortal: A6UP25 - SMR: A6UP25 - STRING: A6UP25 - GeneID: 5325912 - GenomeReviews: CP000742_GR - KEGG: mvn:Mevan_0338 - eggNOG: arNOG04636 - HOGENOM: HBG334108 - OMA: MRFAPNP - ProtClustDB: PRK04156 - GO: GO:0005737 - HAMAP: MF_00022_A - InterPro: IPR001412 - InterPro: IPR004526 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR020059 - InterPro: IPR022888 - InterPro: IPR020056 - InterPro: IPR011035 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:2.40.240.10 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00463
Pfam domain/function: PF00749 tRNA-synt_1c; PF03950 tRNA-synt_1c_C; SSF50715 Ribosomal_L25rel
EC number: =6.1.1.17
Molecular weight: Translated: 64289; Mature: 64289
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDTVMVYLLENSIKFNGKPNPKAVMGKILGGNPDLRNRVNELNEVISKVLKEIEVMSLE CCCEEEEEEEECCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC EQQIKLNEIAPEGLVQKTERKRKEIELKNAKDKVVMRFAPNPSGPLHIGHARASVLNDFF HHHEEHHHCCCHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCEEECHHHHHHHHHHH AKKYNGKLILRLEDTDAKRVLPEAYEMIEEDLKWLGIKVDEVIIQSERLEIYYGYGRKLI HHHCCCEEEEEECCCCCHHHCHHHHHHHHHHHHHCCCCHHHEEEECCCEEEEECCCCEEE EMSYAYVCDCNPEEFKELREKGIPCKCRETTPETNLKLWEKMLAGELDNVAVRLKTDIGH EEEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCC KNPSIRDFPIFRIEKTPHPKNGTKYHVYPLMNLSVTIDDHLMGMTHVLRGKDHIINTEKQ CCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECHHHHHHHHHHCCCCCCCCCCHH EYIYKYFGWESPEYIHYGILKIEGPVLSTSKMHTGILSGEYSGWDDARLGTLRALKKRGI HHHHHHHCCCCCCEEEEEEEEECCCEEECCCHHCCEECCCCCCCCCCHHHHHHHHHHCCC KPEALYKLMVEIGIKQADVKFAWENLNAANKEIIDKDAKRFFFVDSPKKVIITGFKNKKI CHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCEEEEECCCCEEEEEECCCCEE NLRMHPDRSDFGNRELLFDGEIYVSDDLEAGKMYRLMELFNIVVEKIENGVIYAHYDSDD EEEECCCCCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCC ISVARTNKANIIHWIPIKDSVKVTVIDENAEKIEGFAEKDFLITEEDDFVQFERFGFVRI EEEEECCCCCEEEEEECCCCEEEEEECCCHHHHCCCCCCCEEEECCCCCEEHHHCCEEEE DEKLDDGYICYYTHK ECCCCCCEEEEEECC >Mature Secondary Structure MKDTVMVYLLENSIKFNGKPNPKAVMGKILGGNPDLRNRVNELNEVISKVLKEIEVMSLE CCCEEEEEEEECCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC EQQIKLNEIAPEGLVQKTERKRKEIELKNAKDKVVMRFAPNPSGPLHIGHARASVLNDFF HHHEEHHHCCCHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCEEECHHHHHHHHHHH AKKYNGKLILRLEDTDAKRVLPEAYEMIEEDLKWLGIKVDEVIIQSERLEIYYGYGRKLI HHHCCCEEEEEECCCCCHHHCHHHHHHHHHHHHHCCCCHHHEEEECCCEEEEECCCCEEE EMSYAYVCDCNPEEFKELREKGIPCKCRETTPETNLKLWEKMLAGELDNVAVRLKTDIGH EEEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCC KNPSIRDFPIFRIEKTPHPKNGTKYHVYPLMNLSVTIDDHLMGMTHVLRGKDHIINTEKQ CCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECHHHHHHHHHHCCCCCCCCCCHH EYIYKYFGWESPEYIHYGILKIEGPVLSTSKMHTGILSGEYSGWDDARLGTLRALKKRGI HHHHHHHCCCCCCEEEEEEEEECCCEEECCCHHCCEECCCCCCCCCCHHHHHHHHHHCCC KPEALYKLMVEIGIKQADVKFAWENLNAANKEIIDKDAKRFFFVDSPKKVIITGFKNKKI CHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCEEEEECCCCEEEEEECCCCEE NLRMHPDRSDFGNRELLFDGEIYVSDDLEAGKMYRLMELFNIVVEKIENGVIYAHYDSDD EEEECCCCCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCC ISVARTNKANIIHWIPIKDSVKVTVIDENAEKIEGFAEKDFLITEEDDFVQFERFGFVRI EEEEECCCCCEEEEEECCCCEEEEEECCCHHHHCCCCCCCEEEECCCCCEEHHHCCEEEE DEKLDDGYICYYTHK ECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA