| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is resE [H]
Identifier: 150398896
GI number: 150398896
Start: 157752
End: 159614
Strand: Reverse
Name: resE [H]
Synonym: Mevan_0140
Alternate gene names: 150398896
Gene position: 159614-157752 (Counterclockwise)
Preceding gene: 150398898
Following gene: 150398895
Centisome position: 9.28
GC content: 28.72
Gene sequence:
>1863_bases ATGGCCATACCTAACAAAAAGAAACTAGGTACTAAATTACTGTTCTATTCACTAATAAACGTATTAATTCCGATAATGTT GTTTGGATTTGTAGTAACCGATACACTAAACAACATTTTAGATGACAAAGCACAATCAGAGGTTACAACTGGAATTAGTT CTTTAGAGCAAGCAATAAATTTAAAAATTACTGAGATAAGTATTACTTCAAATTATATTACAACTACGCCTGGAATTATT AAAGGAATAAACGAAAGAGATAAAGAAGAACTTTTATTAAGAATTAATCACTTTAAAAGTGTTTCTGATGCAGACTTTGT TGGAATTATTGATAAAGATGGAAAATTAATTACTTCAACTGCTAATGATGTAAATTTTGAAATTGAAGAGATTTCTAAAG AATTATTTAAAAATAATATTGAATCATCGTTTGAAGTAATTTCTAGCGATACTGCATATTTAATAGATAATACTTCAAAA ATTGAAGGGGTAGATAAAGCCCTTTCAATAGTAGTTTTAAAACCCATTTTTGATGATAACAATCAATATATCGGTTCAAT AATTGCAATTGATATATTAAATAATAATTTTCACATGATAAATGACGTTAAAAAAATTACCGGAAGTGATGCAACACTAT TTCTTGGTAACAAAAGAATTACAACAAGTATCACTCATGATGGAAAAAAGCAAGTTGGAACTGAAGTTTCAAGCCTAGTT TGGGATTATATTCAAACCGGAAACGACTACAAGGGAACTACTGAAGTTTTAGGAGTTTCATATATTACCATATATAGGCC AATTTATAATTCAAAAAATGAATTAATTGGAATGATGTTTGTAGGTTCCCCTCAAACTTATGCAGCAGTCGCTAAAAACG AAATTAAAGAAAAAATTATAATTATTGCAATTTTATGCATATTACTTTCAGTTATTACTTCAACATACTCAAATTATCGG ATTAAAAAGCCGATAATGGATTTAAAACGTGGAACTGAAGAATTTGGTAAAGGAAATTATGAGTATAAAACAAATATCAA ATCAGGAGATGAATTAGAACTTTTATCAAATTCGTTTGATAAAATGGCTGAAAAAATAGCCATTTCAAATAAAGAACTTG AAAAACGAGCATTAGAGTTAGAAGAAAAAAATACTGAATTAAAAAAACTTGATGACTTAAAATCAGACCTTATTGCAATA GTTTCACATGAAATTAGAACTCCGCTAACTTCAATTAAAGGTTACGTTGAATTAGTGCTTGATGAAGCTGTTGGAAAAAT TAATAATTCGCAGAGAAAATGTCTTACTACGGCACGTGAAAATGTAGTGCGACTAAACAGGCTTATTTCAAGTATGCTTG ACCTTTCAAAGTTAGCTAAGGGGGAACTTGAAATGCATCGTGAAGAAATTAATATTAAAAAAACAATTGATGAAGTTATT GATGATTTAAAACCCATTTCGGCAGAAAAAAACATTAATATAACTCTCGAAATAGATGATATTATTATAAATGCAGATAA AGATAGAATGAAGCAGGTTTTTATAAATTTGATTGAAAATGCAATTAAATTTAGTCCTGAAAATGAAATTATCGAAATTA AGGGAAAAGAAGAATACCATGGAGATGTTTCAATAACTGTTAAAGATAACGGTGAAGGAATTCCTAAAGATAAATTAGAA AAAGTGTTTGATAGGTTTTACCAAGCAGACCTTTCCCCAAAAAGAAAAGGTAAGGGAACAGGATTAGGACTTGCAGTATG TAAAAGTATTATTCAAGCTCACGGTGGCTCAATATGGGTCAAAAGTGAAATTGGAAAAGGATGTACTTTCTATATCGTTT TACCAAAAAATATCGATAATTAA
Upstream 100 bases:
>100_bases ATAAAAATATATACAATAAATGTAGATTATTATTAAGTTATTTAAAAATTATTAAAGTTATTAAAATTATTAAAAAAATT AGGAATTTTTTTGGGAAACT
Downstream 100 bases:
>100_bases TACTTTTTATAATACTTTTTTAATTCTTAATTTGGTATTTTTTAACTTAAATATTTTAAAGCAGGTGGTTACATTTGGAA TTTAAAAAATTAGGAATAAA
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 620; Mature: 619
Protein sequence:
>620_residues MAIPNKKKLGTKLLFYSLINVLIPIMLFGFVVTDTLNNILDDKAQSEVTTGISSLEQAINLKITEISITSNYITTTPGII KGINERDKEELLLRINHFKSVSDADFVGIIDKDGKLITSTANDVNFEIEEISKELFKNNIESSFEVISSDTAYLIDNTSK IEGVDKALSIVVLKPIFDDNNQYIGSIIAIDILNNNFHMINDVKKITGSDATLFLGNKRITTSITHDGKKQVGTEVSSLV WDYIQTGNDYKGTTEVLGVSYITIYRPIYNSKNELIGMMFVGSPQTYAAVAKNEIKEKIIIIAILCILLSVITSTYSNYR IKKPIMDLKRGTEEFGKGNYEYKTNIKSGDELELLSNSFDKMAEKIAISNKELEKRALELEEKNTELKKLDDLKSDLIAI VSHEIRTPLTSIKGYVELVLDEAVGKINNSQRKCLTTARENVVRLNRLISSMLDLSKLAKGELEMHREEINIKKTIDEVI DDLKPISAEKNINITLEIDDIIINADKDRMKQVFINLIENAIKFSPENEIIEIKGKEEYHGDVSITVKDNGEGIPKDKLE KVFDRFYQADLSPKRKGKGTGLGLAVCKSIIQAHGGSIWVKSEIGKGCTFYIVLPKNIDN
Sequences:
>Translated_620_residues MAIPNKKKLGTKLLFYSLINVLIPIMLFGFVVTDTLNNILDDKAQSEVTTGISSLEQAINLKITEISITSNYITTTPGII KGINERDKEELLLRINHFKSVSDADFVGIIDKDGKLITSTANDVNFEIEEISKELFKNNIESSFEVISSDTAYLIDNTSK IEGVDKALSIVVLKPIFDDNNQYIGSIIAIDILNNNFHMINDVKKITGSDATLFLGNKRITTSITHDGKKQVGTEVSSLV WDYIQTGNDYKGTTEVLGVSYITIYRPIYNSKNELIGMMFVGSPQTYAAVAKNEIKEKIIIIAILCILLSVITSTYSNYR IKKPIMDLKRGTEEFGKGNYEYKTNIKSGDELELLSNSFDKMAEKIAISNKELEKRALELEEKNTELKKLDDLKSDLIAI VSHEIRTPLTSIKGYVELVLDEAVGKINNSQRKCLTTARENVVRLNRLISSMLDLSKLAKGELEMHREEINIKKTIDEVI DDLKPISAEKNINITLEIDDIIINADKDRMKQVFINLIENAIKFSPENEIIEIKGKEEYHGDVSITVKDNGEGIPKDKLE KVFDRFYQADLSPKRKGKGTGLGLAVCKSIIQAHGGSIWVKSEIGKGCTFYIVLPKNIDN >Mature_619_residues AIPNKKKLGTKLLFYSLINVLIPIMLFGFVVTDTLNNILDDKAQSEVTTGISSLEQAINLKITEISITSNYITTTPGIIK GINERDKEELLLRINHFKSVSDADFVGIIDKDGKLITSTANDVNFEIEEISKELFKNNIESSFEVISSDTAYLIDNTSKI EGVDKALSIVVLKPIFDDNNQYIGSIIAIDILNNNFHMINDVKKITGSDATLFLGNKRITTSITHDGKKQVGTEVSSLVW DYIQTGNDYKGTTEVLGVSYITIYRPIYNSKNELIGMMFVGSPQTYAAVAKNEIKEKIIIIAILCILLSVITSTYSNYRI KKPIMDLKRGTEEFGKGNYEYKTNIKSGDELELLSNSFDKMAEKIAISNKELEKRALELEEKNTELKKLDDLKSDLIAIV SHEIRTPLTSIKGYVELVLDEAVGKINNSQRKCLTTARENVVRLNRLISSMLDLSKLAKGELEMHREEINIKKTIDEVID DLKPISAEKNINITLEIDDIIINADKDRMKQVFINLIENAIKFSPENEIIEIKGKEEYHGDVSITVKDNGEGIPKDKLEK VFDRFYQADLSPKRKGKGTGLGLAVCKSIIQAHGGSIWVKSEIGKGCTFYIVLPKNIDN
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=387, Percent_Identity=27.1317829457364, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1786600, Length=275, Percent_Identity=28, Blast_Score=135, Evalue=1e-32, Organism=Escherichia coli, GI1786783, Length=327, Percent_Identity=26.605504587156, Blast_Score=127, Evalue=3e-30, Organism=Escherichia coli, GI1788393, Length=293, Percent_Identity=25.5972696245734, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI145693157, Length=248, Percent_Identity=31.4516129032258, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=33.7552742616034, Blast_Score=121, Evalue=2e-28, Organism=Escherichia coli, GI1786912, Length=296, Percent_Identity=25.6756756756757, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788713, Length=249, Percent_Identity=30.5220883534137, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI1788549, Length=241, Percent_Identity=29.045643153527, Blast_Score=115, Evalue=9e-27, Organism=Escherichia coli, GI48994928, Length=229, Percent_Identity=31.0043668122271, Blast_Score=114, Evalue=3e-26, Organism=Escherichia coli, GI87081816, Length=351, Percent_Identity=24.5014245014245, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790346, Length=318, Percent_Identity=25.4716981132075, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1788279, Length=344, Percent_Identity=25.8720930232558, Blast_Score=93, Evalue=6e-20, Organism=Escherichia coli, GI1787894, Length=320, Percent_Identity=23.75, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI87082128, Length=251, Percent_Identity=26.6932270916335, Blast_Score=90, Evalue=6e-19, Organism=Escherichia coli, GI1790861, Length=345, Percent_Identity=23.1884057971014, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI1789808, Length=337, Percent_Identity=24.3323442136499, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1790551, Length=337, Percent_Identity=24.9258160237389, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1789403, Length=200, Percent_Identity=24, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1787374, Length=216, Percent_Identity=26.3888888888889, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 69412; Mature: 69281
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPNKKKLGTKLLFYSLINVLIPIMLFGFVVTDTLNNILDDKAQSEVTTGISSLEQAIN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LKITEISITSNYITTTPGIIKGINERDKEELLLRINHFKSVSDADFVGIIDKDGKLITST EEEEEEEEECCEEECCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEC ANDVNFEIEEISKELFKNNIESSFEVISSDTAYLIDNTSKIEGVDKALSIVVLKPIFDDN CCCCCEEHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCHHHHHHHHHEEEEEEEEEECCC NQYIGSIIAIDILNNNFHMINDVKKITGSDATLFLGNKRITTSITHDGKKQVGTEVSSLV CCEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHH WDYIQTGNDYKGTTEVLGVSYITIYRPIYNSKNELIGMMFVGSPQTYAAVAKNEIKEKII HHHHHCCCCCCCCHHHHHHEEEEEEEHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH IIAILCILLSVITSTYSNYRIKKPIMDLKRGTEEFGKGNYEYKTNIKSGDELELLSNSFD HHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCHHHHCCCCCEEEECCCCCCHHHHHHHHHH KMAEKIAISNKELEKRALELEEKNTELKKLDDLKSDLIAIVSHEIRTPLTSIKGYVELVL HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DEAVGKINNSQRKCLTTARENVVRLNRLISSMLDLSKLAKGELEMHREEINIKKTIDEVI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH DDLKPISAEKNINITLEIDDIIINADKDRMKQVFINLIENAIKFSPENEIIEIKGKEEYH HHCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC GDVSITVKDNGEGIPKDKLEKVFDRFYQADLSPKRKGKGTGLGLAVCKSIIQAHGGSIWV CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE KSEIGKGCTFYIVLPKNIDN EECCCCCEEEEEEECCCCCC >Mature Secondary Structure AIPNKKKLGTKLLFYSLINVLIPIMLFGFVVTDTLNNILDDKAQSEVTTGISSLEQAIN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LKITEISITSNYITTTPGIIKGINERDKEELLLRINHFKSVSDADFVGIIDKDGKLITST EEEEEEEEECCEEECCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEC ANDVNFEIEEISKELFKNNIESSFEVISSDTAYLIDNTSKIEGVDKALSIVVLKPIFDDN CCCCCEEHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCHHHHHHHHHEEEEEEEEEECCC NQYIGSIIAIDILNNNFHMINDVKKITGSDATLFLGNKRITTSITHDGKKQVGTEVSSLV CCEEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHH WDYIQTGNDYKGTTEVLGVSYITIYRPIYNSKNELIGMMFVGSPQTYAAVAKNEIKEKII HHHHHCCCCCCCCHHHHHHEEEEEEEHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH IIAILCILLSVITSTYSNYRIKKPIMDLKRGTEEFGKGNYEYKTNIKSGDELELLSNSFD HHHHHHHHHHHHHHHHCCCEEHHHHHHHHCCHHHHCCCCCEEEECCCCCCHHHHHHHHHH KMAEKIAISNKELEKRALELEEKNTELKKLDDLKSDLIAIVSHEIRTPLTSIKGYVELVL HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DEAVGKINNSQRKCLTTARENVVRLNRLISSMLDLSKLAKGELEMHREEINIKKTIDEVI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH DDLKPISAEKNINITLEIDDIIINADKDRMKQVFINLIENAIKFSPENEIIEIKGKEEYH HHCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC GDVSITVKDNGEGIPKDKLEKVFDRFYQADLSPKRKGKGTGLGLAVCKSIIQAHGGSIWV CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE KSEIGKGCTFYIVLPKNIDN EECCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]