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The map label for this gene is 150398789

Identifier: 150398789

GI number: 150398789

Start: 26578

End: 27147

Strand: Reverse

Name: 150398789

Synonym: Mevan_0029

Alternate gene names: NA

Gene position: 27147-26578 (Counterclockwise)

Preceding gene: 150398790

Following gene: 150398788

Centisome position: 1.58

GC content: 33.33

Gene sequence:

>570_bases
ATGTATGTATTTTTGGATACTGAAACAACAGGACTCCACCCTGGCCAAATTGCTCAGCTTTCATACCTTGTTACCGATGA
AGAATTGAACATAAAAAAGGCATTTAATCAGTATTACTCGGTAGAACATATGTCAAGGAGCGCTGCAAGAATTCACGGGC
TTACGCAGGATATTTTAGAAGAACTTTCATCAGGATTGGTATTTGAAGATACTATTAAAGAAGTATTAAGCGACCTAAAA
TATTCCGTGATAATTGGACATAATATTTCTTTCGATATTCGCTTTTTAAAAGCTGAAATTGAGCGTTTGGGTGAAGAATA
TGTTCCAAAAGAAAAATTTTGTACAATGTGCCACTTTACAAAAATCTGCAAAATTCCGGGAGTTAGGCAGTATAAACGTC
CAAAACTAATTGAATTAATGGATTATTTAAAACAATGCCCTAAAGAAGGCTTGAAATTTACAAAAAATACATATGGTTGC
AGTGATGTTGGTTTTCACGATGCAAGATTTGATACTGGAGTAATGTATCTTTGCTACAAAAAAGGAGTTGAACTAAGACA
TATTAAATAA

Upstream 100 bases:

>100_bases
GAATAATAATTTCTATTAAATCTTAAATAACCTTATATATAAACTTGAGTTATTCTAAAAATAAGTTATAGAATTTAAAG
ATGTTTAAGATGTGTAAAAA

Downstream 100 bases:

>100_bases
TAACTAAATATGGTAAATGAAATAGGTAGGAAAGGAATAGTAGTAATGAATAGTAGTAAACGTAATAAAAATTAGCAAAA
ATAGTAAATGTATAGAAATT

Product: exonuclease RNase T and DNA polymerase III

Products: NA

Alternate protein names: Exonuclease; DNA Polymerase III Epsilon Subunit

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MYVFLDTETTGLHPGQIAQLSYLVTDEELNIKKAFNQYYSVEHMSRSAARIHGLTQDILEELSSGLVFEDTIKEVLSDLK
YSVIIGHNISFDIRFLKAEIERLGEEYVPKEKFCTMCHFTKICKIPGVRQYKRPKLIELMDYLKQCPKEGLKFTKNTYGC
SDVGFHDARFDTGVMYLCYKKGVELRHIK

Sequences:

>Translated_189_residues
MYVFLDTETTGLHPGQIAQLSYLVTDEELNIKKAFNQYYSVEHMSRSAARIHGLTQDILEELSSGLVFEDTIKEVLSDLK
YSVIIGHNISFDIRFLKAEIERLGEEYVPKEKFCTMCHFTKICKIPGVRQYKRPKLIELMDYLKQCPKEGLKFTKNTYGC
SDVGFHDARFDTGVMYLCYKKGVELRHIK
>Mature_189_residues
MYVFLDTETTGLHPGQIAQLSYLVTDEELNIKKAFNQYYSVEHMSRSAARIHGLTQDILEELSSGLVFEDTIKEVLSDLK
YSVIIGHNISFDIRFLKAEIERLGEEYVPKEKFCTMCHFTKICKIPGVRQYKRPKLIELMDYLKQCPKEGLKFTKNTYGC
SDVGFHDARFDTGVMYLCYKKGVELRHIK

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21923; Mature: 21923

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVFLDTETTGLHPGQIAQLSYLVTDEELNIKKAFNQYYSVEHMSRSAARIHGLTQDILE
CEEEEECCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ELSSGLVFEDTIKEVLSDLKYSVIIGHNISFDIRFLKAEIERLGEEYVPKEKFCTMCHFT
HHHCCCEEHHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KICKIPGVRQYKRPKLIELMDYLKQCPKEGLKFTKNTYGCSDVGFHDARFDTGVMYLCYK
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEC
KGVELRHIK
CCCCEECCC
>Mature Secondary Structure
MYVFLDTETTGLHPGQIAQLSYLVTDEELNIKKAFNQYYSVEHMSRSAARIHGLTQDILE
CEEEEECCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ELSSGLVFEDTIKEVLSDLKYSVIIGHNISFDIRFLKAEIERLGEEYVPKEKFCTMCHFT
HHHCCCEEHHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KICKIPGVRQYKRPKLIELMDYLKQCPKEGLKFTKNTYGCSDVGFHDARFDTGVMYLCYK
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEC
KGVELRHIK
CCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA