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The map label for this gene is yrhP [H]

Identifier: 150398734

GI number: 150398734

Start: 3757096

End: 3757728

Strand: Direct

Name: yrhP [H]

Synonym: Smed_3551

Alternate gene names: 150398734

Gene position: 3757096-3757728 (Clockwise)

Preceding gene: 150398732

Following gene: 150398736

Centisome position: 99.34

GC content: 62.4

Gene sequence:

>633_bases
ATGCCCGAAATTCAGAACCTCCTGGGCTTTGCCCTGATCGCGCTCGGCATGGTCCTGACTCCGGGGCCGAACATGCTTTA
TCTGATCTCCCGTTCGATCTGTCAGGGACCGGCGGCGGGACTGATCTCGCTCACGGGTGTTGCGCTCGGTTTCGTTTTCT
ACATGGTCTCCGCCGCACTCGGAATCACGGCCCTGCTTCTGGCGGTTCCCTTCGCCTATGATGCCCTTCGTTTCGCGGGC
GCGCTTTACCTGCTCTATCTTGCCTGGCAGGCGGTGCGGCCGGGCGGTCGCTCGCTTTTTCAGGTGCGGGACCTGCCGAA
GGACGGGCCCCGCAAGCTCTTCGCAATGGGCTTTTTCACCAGCCTGCTCAATCCGAAGGTGGCCATCCTTTACCTGTCGC
TGCTGCCGCAATTCGTCAGCCCCGAAGCCGGCAATGTGCTTGCGCAATCGCTTGTCTTCGGCAGCGTGCAGATCATGATC
AGTGTCACCGTCAACGCAGTGATCGCAGTGACGGCCGGCTCGGTAGCCGCCTTCCTGGCGGGTCGCCCGTCCTTCATGCT
GGTGCAGCGATGGCTGATGAGCACGGTGCTCGCCGGCCTCGCTATCAGCATCGCCGCTGAGGCACGGCGTTAA

Upstream 100 bases:

>100_bases
TGGCGCGCGCTTTCGGGTAAAATGACCTGGTGACAAGAATGGCGTTGCCCTCACGGGAATGGCCATACACCTTCCGAAAG
ATTGGGGAGACCGGTGAGCC

Downstream 100 bases:

>100_bases
AGCACTTCCAGGAAAAGTGTGTAACGGTTTTCCGTCCGGAAGTGCGTAAAGCGATCACTTCCAACGATTTAGGCTTGCCG
TTTCAATCCACGCTTGGCCG

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MPEIQNLLGFALIALGMVLTPGPNMLYLISRSICQGPAAGLISLTGVALGFVFYMVSAALGITALLLAVPFAYDALRFAG
ALYLLYLAWQAVRPGGRSLFQVRDLPKDGPRKLFAMGFFTSLLNPKVAILYLSLLPQFVSPEAGNVLAQSLVFGSVQIMI
SVTVNAVIAVTAGSVAAFLAGRPSFMLVQRWLMSTVLAGLAISIAAEARR

Sequences:

>Translated_210_residues
MPEIQNLLGFALIALGMVLTPGPNMLYLISRSICQGPAAGLISLTGVALGFVFYMVSAALGITALLLAVPFAYDALRFAG
ALYLLYLAWQAVRPGGRSLFQVRDLPKDGPRKLFAMGFFTSLLNPKVAILYLSLLPQFVSPEAGNVLAQSLVFGSVQIMI
SVTVNAVIAVTAGSVAAFLAGRPSFMLVQRWLMSTVLAGLAISIAAEARR
>Mature_209_residues
PEIQNLLGFALIALGMVLTPGPNMLYLISRSICQGPAAGLISLTGVALGFVFYMVSAALGITALLLAVPFAYDALRFAGA
LYLLYLAWQAVRPGGRSLFQVRDLPKDGPRKLFAMGFFTSLLNPKVAILYLSLLPQFVSPEAGNVLAQSLVFGSVQIMIS
VTVNAVIAVTAGSVAAFLAGRPSFMLVQRWLMSTVLAGLAISIAAEARR

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=195, Percent_Identity=25.1282051282051, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI48994979, Length=173, Percent_Identity=27.1676300578035, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22251; Mature: 22120

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEIQNLLGFALIALGMVLTPGPNMLYLISRSICQGPAAGLISLTGVALGFVFYMVSAAL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GITALLLAVPFAYDALRFAGALYLLYLAWQAVRPGGRSLFQVRDLPKDGPRKLFAMGFFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHH
SLLNPKVAILYLSLLPQFVSPEAGNVLAQSLVFGSVQIMISVTVNAVIAVTAGSVAAFLA
HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEHHHHHHEEEHHHHHHHHHC
GRPSFMLVQRWLMSTVLAGLAISIAAEARR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEIQNLLGFALIALGMVLTPGPNMLYLISRSICQGPAAGLISLTGVALGFVFYMVSAAL
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GITALLLAVPFAYDALRFAGALYLLYLAWQAVRPGGRSLFQVRDLPKDGPRKLFAMGFFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHH
SLLNPKVAILYLSLLPQFVSPEAGNVLAQSLVFGSVQIMISVTVNAVIAVTAGSVAAFLA
HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEHHHHHHEEEHHHHHHHHHC
GRPSFMLVQRWLMSTVLAGLAISIAAEARR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]