Click here to switch to the map view.

The map label for this gene is 150398690

Identifier: 150398690

GI number: 150398690

Start: 3709638

End: 3710894

Strand: Reverse

Name: 150398690

Synonym: Smed_3504

Alternate gene names: NA

Gene position: 3710894-3709638 (Counterclockwise)

Preceding gene: 150398691

Following gene: 150398686

Centisome position: 98.12

GC content: 63.8

Gene sequence:

>1257_bases
ATGAACGCCCCCCTCCAATCCGTGAAAAACCCTGTCGATCCGGTCAAGCTCGAAAAGCTCGCCGAGGTCGCCATCAAGAT
CGGCCTGCAATTGCAGAAGGGCCAGGATCTGGTGATGACCGCGCCGATCGCGGCGCTGCCGCTCGTCCGGCTCATCACCA
AGCATGCCTATAAGGCGGGGGCCGGACTGGTGACGACCTTCTACGCCGACGAGGAAACGACTCTCGCCCGCTATGCCCAT
GCGCCGGACGAGAGTTTCGACCGCGCCAGCGACTGGCTTTACGAGGGGATGGCCAGAGCCTATGCCGGTGGCGCTGCGCG
CCTTGCCATCGCCGGCGACAATCCGATGCTGCTTTCGGCTCAGGATCCGACGAAGGTCGCGCGCGCCAACAAGGCGAACT
CGATCGCCTACAAGCCGGCGCTGGAGAAGATATCAAACTTCGACATCAACTGGAACATCGTCTCCTATCCGAACCCCTCC
TGGGCGAAGCAGATGTTCCCGGACGATCCCGAAGCGGTTGCGGTGGAAAAGCTGGCAAACGCCATCTTCGCCGCATCGCG
GGTCGACGTCGACGATCCGATCGCCGCCTGGAAGGAGCACAACGCCAATCTGCACCAGCGCTCGAACTGGCTCAACGAGG
AACGTTTCGCCGCCCTCCACTTCACGGGACCCGGCACCAACCTGACCATCGGATTGGCGGACGGCCACGAGTGGCATGGC
GGCGCCTCGGTCGCCAAGAACGGCATCACCTGCAATCCGAACATCCCGACCGAAGAGGTCTTCACCACGCCGCACGCGCT
GCGCGTCGAAGGCCATGTGTCGAGCACCAAGCCGCTCTCCCATCAGGGCACGCTGATCGACAATATTCAGGTGCGTTTCG
AAGGCGGCCGTATCGTCGAGGCCAAGGCCGCGCGCGGCGAAGAGGTTCTGAACAAGGTGCTCGATACGGACGAGGGCGCC
CGCCGCCTCGGCGAGGTGGCGCTTGTGCCGCATTCCTCGCCGATCTCGGCAAGCGGCATCCTCTTCTACAACACCCTCTT
CGACGAGAATGCCTCCTGCCACATCGCGCTTGGCCAGTGCTATTCGAAGTGTTTCCTCGACGGGGCGAGCCTCAGCCAGG
AGCAGATCCGCGCCCAGGGCGGCAATGCGAGCCTGATCCACATCGACTGGATGATCGGTTCCGGTGAGGTCGACATCGAC
GGCGTACGCGCCGACGGCGGCCGTGTGCCCGTCATGCGCAAGGGCGAGTGGGCCTGA

Upstream 100 bases:

>100_bases
TGCTCAAGACCGAAAGGGCAGCGGCCTGAAGGCGCTTCTGTTTTCGGCGGAACCGGTCTAAAACCGCATAATATCCGCAA
GCAGACGACCAGGAGCCGCC

Downstream 100 bases:

>100_bases
ATCTGCCGAAGCCGCCCCTCATCCGCCTGCCGGCACTTCTCCCCGTTCCGACGGGGAGAAGTGCCGCCCTCACCTTTTAA
GACTATTCACTTCCGGACGA

Product: peptidase M29 aminopeptidase II

Products: NA

Alternate protein names: AP-T; Heat-stable aminopeptidase [H]

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNAPLQSVKNPVDPVKLEKLAEVAIKIGLQLQKGQDLVMTAPIAALPLVRLITKHAYKAGAGLVTTFYADEETTLARYAH
APDESFDRASDWLYEGMARAYAGGAARLAIAGDNPMLLSAQDPTKVARANKANSIAYKPALEKISNFDINWNIVSYPNPS
WAKQMFPDDPEAVAVEKLANAIFAASRVDVDDPIAAWKEHNANLHQRSNWLNEERFAALHFTGPGTNLTIGLADGHEWHG
GASVAKNGITCNPNIPTEEVFTTPHALRVEGHVSSTKPLSHQGTLIDNIQVRFEGGRIVEAKAARGEEVLNKVLDTDEGA
RRLGEVALVPHSSPISASGILFYNTLFDENASCHIALGQCYSKCFLDGASLSQEQIRAQGGNASLIHIDWMIGSGEVDID
GVRADGGRVPVMRKGEWA

Sequences:

>Translated_418_residues
MNAPLQSVKNPVDPVKLEKLAEVAIKIGLQLQKGQDLVMTAPIAALPLVRLITKHAYKAGAGLVTTFYADEETTLARYAH
APDESFDRASDWLYEGMARAYAGGAARLAIAGDNPMLLSAQDPTKVARANKANSIAYKPALEKISNFDINWNIVSYPNPS
WAKQMFPDDPEAVAVEKLANAIFAASRVDVDDPIAAWKEHNANLHQRSNWLNEERFAALHFTGPGTNLTIGLADGHEWHG
GASVAKNGITCNPNIPTEEVFTTPHALRVEGHVSSTKPLSHQGTLIDNIQVRFEGGRIVEAKAARGEEVLNKVLDTDEGA
RRLGEVALVPHSSPISASGILFYNTLFDENASCHIALGQCYSKCFLDGASLSQEQIRAQGGNASLIHIDWMIGSGEVDID
GVRADGGRVPVMRKGEWA
>Mature_418_residues
MNAPLQSVKNPVDPVKLEKLAEVAIKIGLQLQKGQDLVMTAPIAALPLVRLITKHAYKAGAGLVTTFYADEETTLARYAH
APDESFDRASDWLYEGMARAYAGGAARLAIAGDNPMLLSAQDPTKVARANKANSIAYKPALEKISNFDINWNIVSYPNPS
WAKQMFPDDPEAVAVEKLANAIFAASRVDVDDPIAAWKEHNANLHQRSNWLNEERFAALHFTGPGTNLTIGLADGHEWHG
GASVAKNGITCNPNIPTEEVFTTPHALRVEGHVSSTKPLSHQGTLIDNIQVRFEGGRIVEAKAARGEEVLNKVLDTDEGA
RRLGEVALVPHSSPISASGILFYNTLFDENASCHIALGQCYSKCFLDGASLSQEQIRAQGGNASLIHIDWMIGSGEVDID
GVRADGGRVPVMRKGEWA

Specific function: Metal-dependent exopeptidase [H]

COG id: COG2309

COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M29 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000787 [H]

Pfam domain/function: PF02073 Peptidase_M29 [H]

EC number: NA

Molecular weight: Translated: 45172; Mature: 45172

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPLQSVKNPVDPVKLEKLAEVAIKIGLQLQKGQDLVMTAPIAALPLVRLITKHAYKAG
CCCCHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEECCHHHHHHHHHHHHHHHHCC
AGLVTTFYADEETTLARYAHAPDESFDRASDWLYEGMARAYAGGAARLAIAGDNPMLLSA
CCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEC
QDPTKVARANKANSIAYKPALEKISNFDINWNIVSYPNPSWAKQMFPDDPEAVAVEKLAN
CCCHHHHHCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHH
AIFAASRVDVDDPIAAWKEHNANLHQRSNWLNEERFAALHFTGPGTNLTIGLADGHEWHG
HHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCC
GASVAKNGITCNPNIPTEEVFTTPHALRVEGHVSSTKPLSHQGTLIDNIQVRFEGGRIVE
CHHHHCCCEEECCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCEEEE
AKAARGEEVLNKVLDTDEGARRLGEVALVPHSSPISASGILFYNTLFDENASCHIALGQC
EHHCCCHHHHHHHHCCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEHHHH
YSKCFLDGASLSQEQIRAQGGNASLIHIDWMIGSGEVDIDGVRADGGRVPVMRKGEWA
HHHHHCCCCCCCHHHHHHCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCEECCCCCC
>Mature Secondary Structure
MNAPLQSVKNPVDPVKLEKLAEVAIKIGLQLQKGQDLVMTAPIAALPLVRLITKHAYKAG
CCCCHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEECCHHHHHHHHHHHHHHHHCC
AGLVTTFYADEETTLARYAHAPDESFDRASDWLYEGMARAYAGGAARLAIAGDNPMLLSA
CCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEC
QDPTKVARANKANSIAYKPALEKISNFDINWNIVSYPNPSWAKQMFPDDPEAVAVEKLAN
CCCHHHHHCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHH
AIFAASRVDVDDPIAAWKEHNANLHQRSNWLNEERFAALHFTGPGTNLTIGLADGHEWHG
HHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCC
GASVAKNGITCNPNIPTEEVFTTPHALRVEGHVSSTKPLSHQGTLIDNIQVRFEGGRIVE
CHHHHCCCEEECCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCEEEE
AKAARGEEVLNKVLDTDEGARRLGEVALVPHSSPISASGILFYNTLFDENASCHIALGQC
EHHCCCHHHHHHHHCCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEHHHH
YSKCFLDGASLSQEQIRAQGGNASLIHIDWMIGSGEVDIDGVRADGGRVPVMRKGEWA
HHHHHCCCCCCCHHHHHHCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9362117 [H]