| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150398641
Identifier: 150398641
GI number: 150398641
Start: 3662981
End: 3663370
Strand: Reverse
Name: 150398641
Synonym: Smed_3455
Alternate gene names: NA
Gene position: 3663370-3662981 (Counterclockwise)
Preceding gene: 150398645
Following gene: 150398639
Centisome position: 96.87
GC content: 58.72
Gene sequence:
>390_bases GTGGCAAAACCGGAACTTGGAACGAAGCGTATCGACCCGGAAACGGGGCGCAAATTCTACGACCTGAACCGTGATCCGAT CGTCTCCCCCTATACGGGCAAGTCCTATCCGCTGTCCTTCTTCGAGGAGACCTCCGTCGCCAAGGTGCTCGAGAAGGAAG AAGAGGAAGAGGTAACGGAAGTCGATACCGAGAACACGGAAGTCGAACTCGTTTCGCTCGAGGATGCGGACGACGAGGCA TCGGGCGGCGACGACCTGCCGGATCTCGGCGACGACGATGTCGAGATCGAGGGTGACGACGACGACACGTTCCTCCAGAC CGACGACGAGGACGACGACGACGACATGAGCGACATCATCGGCGTATCCGATGAGGATGAAGACGTCTGA
Upstream 100 bases:
>100_bases TGATTATGGGGACCGGCTAATCATCATAAGCTTGACACCTTTCTAACCGCCGGCTTTCCGGCAAGAGCCGGCTTGTCCGG CCATTCAAGAGGCTTTGACT
Downstream 100 bases:
>100_bases TCAGTCTGGCAATGCGGGCGGATCGCCGCCCGCTTGCCTGCCCCCCGGGGCGCGCCCCGAAAGGCGCACGAAACCGCCTC TTCGCCGTGCACGAGCGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MAKPELGTKRIDPETGRKFYDLNRDPIVSPYTGKSYPLSFFEETSVAKVLEKEEEEEVTEVDTENTEVELVSLEDADDEA SGGDDLPDLGDDDVEIEGDDDDTFLQTDDEDDDDDMSDIIGVSDEDEDV
Sequences:
>Translated_129_residues MAKPELGTKRIDPETGRKFYDLNRDPIVSPYTGKSYPLSFFEETSVAKVLEKEEEEEVTEVDTENTEVELVSLEDADDEA SGGDDLPDLGDDDVEIEGDDDDTFLQTDDEDDDDDMSDIIGVSDEDEDV >Mature_128_residues AKPELGTKRIDPETGRKFYDLNRDPIVSPYTGKSYPLSFFEETSVAKVLEKEEEEEVTEVDTENTEVELVSLEDADDEAS GGDDLPDLGDDDVEIEGDDDDTFLQTDDEDDDDDMSDIIGVSDEDEDV
Specific function: Unknown
COG id: COG4530
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14392; Mature: 14261
Theoretical pI: Translated: 3.37; Mature: 3.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPELGTKRIDPETGRKFYDLNRDPIVSPYTGKSYPLSFFEETSVAKVLEKEEEEEVTE CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VDTENTEVELVSLEDADDEASGGDDLPDLGDDDVEIEGDDDDTFLQTDDEDDDDDMSDII CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHC GVSDEDEDV CCCCCCCCC >Mature Secondary Structure AKPELGTKRIDPETGRKFYDLNRDPIVSPYTGKSYPLSFFEETSVAKVLEKEEEEEVTE CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VDTENTEVELVSLEDADDEASGGDDLPDLGDDDVEIEGDDDDTFLQTDDEDDDDDMSDII CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHC GVSDEDEDV CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA