| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is pit [H]
Identifier: 150398582
GI number: 150398582
Start: 3598801
End: 3599805
Strand: Reverse
Name: pit [H]
Synonym: Smed_3393
Alternate gene names: 150398582
Gene position: 3599805-3598801 (Counterclockwise)
Preceding gene: 150398583
Following gene: 150398581
Centisome position: 95.18
GC content: 61.79
Gene sequence:
>1005_bases ATGGATGCGACGCTCGCCTTCCCCCTGCTTGTGGGGCTCATCGCCGTCGCGCTGTTCTTCGATTTCCTCAACGGATTGCA CGACGCGGCCAATTCGATCGCGACCATCGTTTCGACCCGCGTGCTCCGGCCGCAATATGCCGTCTTATGGGCGGCGTTCT TCAACTTCATCGCCTTCCTCTTCTTCGGGCTTCACGTTGCCGAAACGCTTGGCACCGGCATCATCGATCCGGGTATCGTT ACGCCACAGGTCATTTTCGCGGCCTTGATGGGCGCGATCATCTGGAACATCGTTACCTGGATTTTCGGAATTCCGTCGAG TTCCTCACACGCTCTGATCGGCGGCCTCGTCGGCGCCGGCCTCGCCAAGACGGGCTTCAGTTCGATCGTCTGGCAGGGCC TCCTGAAGACGGCCGGGGCCATCGTCATGTCGCCGGGAATCGGCTTCGTTCTGGCGCTGCTCCTGGTGCTGATCGTCTCC TGGCTCTTCGTTCGCCAGACACCTTTCGCCGTCGACAGCACCTTCCGGGTGCTGCAGTTCGTTTCCGCTTCATTTTACTC GCTCGGCCACGGCGGCAATGATGCACAGAAAACCATGGGCATCATTGCCGTGCTTCTTTTCTCGCAAGGCTATCTCGGTT CGGATTTCTACGTGCCTTTCTGGGTGGTCATCACCTGCCAGGCGGCGATCGCACTCGGCACGCTCTTCGGCGGCTGGAGG ATCGTACACACGATGGGCTCGAAGATAACCAAGCTCAATCCGATGCAGGGTTTCTGCGCCGAGACGGGCGGTGCCATTAC CCTGTTCGCCGCGACCTGGCTCGGAATTCCGGTCTCGACAACCCACACGATCACCGGCGCGATCATCGGCGTCGGCGCGG CGCGGCGCGTGTCGGCGGTGCGCTGGGGCCTTGCCGGCAACATCGTCGTCGCCTGGGTGATTACGCTTCCCGCCGCCGCC CTGATCTCCGCCCTTTGCTATTTCGCCGTCGGTCTGGTCGGCTGA
Upstream 100 bases:
>100_bases ATATCATCGGCAGCGAGATCTATGGCGAACTGGAAAAGGTCGTCGACCGCTTTGAGGACGTTGCAAACGAAATCAGCGGC ATCGTGATCGAGAACGTCTG
Downstream 100 bases:
>100_bases TCCTTCCTTCGTCAGGTGGCCCGTTGGCATCGCCGGCGGTAGGGAGTATATTTTCACCACCTAATAGAATCGCATCCGAA GGAAAATGAACTCCATCGTA
Product: phosphate transporter
Products: Proton [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MDATLAFPLLVGLIAVALFFDFLNGLHDAANSIATIVSTRVLRPQYAVLWAAFFNFIAFLFFGLHVAETLGTGIIDPGIV TPQVIFAALMGAIIWNIVTWIFGIPSSSSHALIGGLVGAGLAKTGFSSIVWQGLLKTAGAIVMSPGIGFVLALLLVLIVS WLFVRQTPFAVDSTFRVLQFVSASFYSLGHGGNDAQKTMGIIAVLLFSQGYLGSDFYVPFWVVITCQAAIALGTLFGGWR IVHTMGSKITKLNPMQGFCAETGGAITLFAATWLGIPVSTTHTITGAIIGVGAARRVSAVRWGLAGNIVVAWVITLPAAA LISALCYFAVGLVG
Sequences:
>Translated_334_residues MDATLAFPLLVGLIAVALFFDFLNGLHDAANSIATIVSTRVLRPQYAVLWAAFFNFIAFLFFGLHVAETLGTGIIDPGIV TPQVIFAALMGAIIWNIVTWIFGIPSSSSHALIGGLVGAGLAKTGFSSIVWQGLLKTAGAIVMSPGIGFVLALLLVLIVS WLFVRQTPFAVDSTFRVLQFVSASFYSLGHGGNDAQKTMGIIAVLLFSQGYLGSDFYVPFWVVITCQAAIALGTLFGGWR IVHTMGSKITKLNPMQGFCAETGGAITLFAATWLGIPVSTTHTITGAIIGVGAARRVSAVRWGLAGNIVVAWVITLPAAA LISALCYFAVGLVG >Mature_334_residues MDATLAFPLLVGLIAVALFFDFLNGLHDAANSIATIVSTRVLRPQYAVLWAAFFNFIAFLFFGLHVAETLGTGIIDPGIV TPQVIFAALMGAIIWNIVTWIFGIPSSSSHALIGGLVGAGLAKTGFSSIVWQGLLKTAGAIVMSPGIGFVLALLLVLIVS WLFVRQTPFAVDSTFRVLQFVSASFYSLGHGGNDAQKTMGIIAVLLFSQGYLGSDFYVPFWVVITCQAAIALGTLFGGWR IVHTMGSKITKLNPMQGFCAETGGAITLFAATWLGIPVSTTHTITGAIIGVGAARRVSAVRWGLAGNIVVAWVITLPAAA LISALCYFAVGLVG
Specific function: Low-affinity inorganic phosphate transport (Probable) [H]
COG id: COG0306
COG function: function code P; Phosphate/sulphate permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. Pit subfamily [H]
Homologues:
Organism=Homo sapiens, GI31543630, Length=161, Percent_Identity=35.4037267080745, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI5803173, Length=152, Percent_Identity=38.1578947368421, Blast_Score=102, Evalue=4e-22, Organism=Escherichia coli, GI1789907, Length=220, Percent_Identity=34.5454545454545, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1789360, Length=223, Percent_Identity=33.1838565022422, Blast_Score=104, Evalue=8e-24, Organism=Caenorhabditis elegans, GI25146401, Length=170, Percent_Identity=33.5294117647059, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17539280, Length=151, Percent_Identity=33.112582781457, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71981576, Length=158, Percent_Identity=31.6455696202532, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI32566716, Length=173, Percent_Identity=32.3699421965318, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17536725, Length=172, Percent_Identity=30.2325581395349, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17557328, Length=164, Percent_Identity=29.2682926829268, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6319773, Length=158, Percent_Identity=32.2784810126582, Blast_Score=83, Evalue=7e-17, Organism=Drosophila melanogaster, GI21356511, Length=202, Percent_Identity=31.1881188118812, Blast_Score=93, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001204 [H]
Pfam domain/function: PF01384 PHO4 [H]
EC number: NA
Molecular weight: Translated: 35115; Mature: 35115
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATLAFPLLVGLIAVALFFDFLNGLHDAANSIATIVSTRVLRPQYAVLWAAFFNFIAFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FFGLHVAETLGTGIIDPGIVTPQVIFAALMGAIIWNIVTWIFGIPSSSSHALIGGLVGAG HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAKTGFSSIVWQGLLKTAGAIVMSPGIGFVLALLLVLIVSWLFVRQTPFAVDSTFRVLQF HHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VSASFYSLGHGGNDAQKTMGIIAVLLFSQGYLGSDFYVPFWVVITCQAAIALGTLFGGWR HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IVHTMGSKITKLNPMQGFCAETGGAITLFAATWLGIPVSTTHTITGAIIGVGAARRVSAV HHHHHHCHHHCCCCCCCHHHCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHH RWGLAGNIVVAWVITLPAAALISALCYFAVGLVG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDATLAFPLLVGLIAVALFFDFLNGLHDAANSIATIVSTRVLRPQYAVLWAAFFNFIAFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FFGLHVAETLGTGIIDPGIVTPQVIFAALMGAIIWNIVTWIFGIPSSSSHALIGGLVGAG HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAKTGFSSIVWQGLLKTAGAIVMSPGIGFVLALLLVLIVSWLFVRQTPFAVDSTFRVLQF HHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VSASFYSLGHGGNDAQKTMGIIAVLLFSQGYLGSDFYVPFWVVITCQAAIALGTLFGGWR HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IVHTMGSKITKLNPMQGFCAETGGAITLFAATWLGIPVSTTHTITGAIIGVGAARRVSAV HHHHHHCHHHCCCCCCCHHHCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHH RWGLAGNIVVAWVITLPAAALISALCYFAVGLVG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + phosphate [Periplasm] = Proton [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9696772; 11481430 [H]