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The map label for this gene is yejB [H]

Identifier: 150398554

GI number: 150398554

Start: 3565323

End: 3566405

Strand: Reverse

Name: yejB [H]

Synonym: Smed_3365

Alternate gene names: 150398554

Gene position: 3566405-3565323 (Counterclockwise)

Preceding gene: 150398555

Following gene: 150398553

Centisome position: 94.3

GC content: 58.45

Gene sequence:

>1083_bases
ATGGGTGCCTATATCCTGCGCCGGCTTCTGCTGATGATCCCGACCATCGTTGGGATCATGGCGATCTCCTTTGCAGTGGT
ACAGTTCGCGCCGGGCGGGCCGGTCGAACAGGTGATCTCCGACCTGACCAATGCTGCCGGCTCAGACAGGCTTTCCGGCA
ATTCCGGCGATCTCGCGCCTGTAGGCGGTGGCGACGGCGGGCAGTATCGCGGGGCTCAAGGTCTCGATCCCGATTTCATC
GCCAAGCTCGAAAAGCAGTTCGGCTTCGACAAGCCGCCGCTCGAGCGCTTCGTCACGATGATGTGGGACTATGCCCGATT
CGACTTCGGCGAGAGCTTTTTCCGCAATACGCCGGTCATCGACCTGATCGTCCAGAAAATGCCCGTTTCCATCTCGCTCG
GTGTCTGGATCCTCATATTCTCCTATGCCATTTCGATCCCTCTCGGCATCAAGAAGGCCGTTTCCGACGGTTCGACCTTC
GACGTCTGGACGTCCGGCATCATCATCGTCGGCTATGCGGTGCCGAGCTTCCTCTTCGGCATTCTCCTGATCGTGCTTTT
CGCCGGCGGTTCGTTTTTCGACTGGTTCCCCTTGCGGGGCCTGGTCTCGGACAATTTCGAGGAGCTCACCTGGTACGAGA
AGATCCTCGATTATTTCTGGCATATGACGCTGCCGCTGATCACGCTTCTGCTCTCTGCCTTCGCGACCACGACGCTGCTC
ACGAAGAATTCCTTCATCGACGAGATCAAGAAGCAATATGTGACGACGGCGCGGGCAAAGGGCCTGAACGAGCGTCGCGT
CCTCTACGGGCATGTTTTCCGTAATGCGATGCTGATCATCATCGCCGGCTTCCCCGGCGCCTTCATCTCCGCCTTCTTCA
CGGGATCGCTCCTCATCGAATACATCTTCTCACTCGATGGGCTGGGTCGGCTCGGCTACGACGCGGTCGTCAAGCGCGAC
TATCCGATCGTCTTCGCAACTCTCTTCATCTACTCGCTGATGGGACTCGTCGTGAGCCTCGTCTCGGATCTCATCTACAC
CTGGGTCGACCCACGCATCGATTTCGAGCGGAGGGACGTCTGA

Upstream 100 bases:

>100_bases
GCCGCTGGGAGAAGCAGGATTTGACGCACATTAGAGCAATTCCAGTCGACGCTGCGCCGGTGTGCCTAGCCAGCAATTCG
TCGATCCAGAGGTTCGCCTG

Downstream 100 bases:

>100_bases
TGAGCGCCGTCACCGCCTATGCCGCGCCGGAAAAGGGCTGGCTCACGCCGATCGGGCGCCGCCGCTGGCAGAATTTCAAG
GCCAACCGCCGCGGCTACTG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MGAYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNSGDLAPVGGGDGGQYRGAQGLDPDFI
AKLEKQFGFDKPPLERFVTMMWDYARFDFGESFFRNTPVIDLIVQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTF
DVWTSGIIIVGYAVPSFLFGILLIVLFAGGSFFDWFPLRGLVSDNFEELTWYEKILDYFWHMTLPLITLLLSAFATTTLL
TKNSFIDEIKKQYVTTARAKGLNERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLIEYIFSLDGLGRLGYDAVVKRD
YPIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFERRDV

Sequences:

>Translated_360_residues
MGAYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNSGDLAPVGGGDGGQYRGAQGLDPDFI
AKLEKQFGFDKPPLERFVTMMWDYARFDFGESFFRNTPVIDLIVQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTF
DVWTSGIIIVGYAVPSFLFGILLIVLFAGGSFFDWFPLRGLVSDNFEELTWYEKILDYFWHMTLPLITLLLSAFATTTLL
TKNSFIDEIKKQYVTTARAKGLNERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLIEYIFSLDGLGRLGYDAVVKRD
YPIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFERRDV
>Mature_359_residues
GAYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNSGDLAPVGGGDGGQYRGAQGLDPDFIA
KLEKQFGFDKPPLERFVTMMWDYARFDFGESFFRNTPVIDLIVQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTFD
VWTSGIIIVGYAVPSFLFGILLIVLFAGGSFFDWFPLRGLVSDNFEELTWYEKILDYFWHMTLPLITLLLSAFATTTLLT
KNSFIDEIKKQYVTTARAKGLNERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLIEYIFSLDGLGRLGYDAVVKRDY
PIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFERRDV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=365, Percent_Identity=58.3561643835616, Blast_Score=439, Evalue=1e-124,
Organism=Escherichia coli, GI1789965, Length=373, Percent_Identity=32.171581769437, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1787497, Length=356, Percent_Identity=26.685393258427, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1789888, Length=353, Percent_Identity=27.1954674220963, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1787053, Length=360, Percent_Identity=29.1666666666667, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787550, Length=262, Percent_Identity=25.1908396946565, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787761, Length=365, Percent_Identity=23.5616438356164, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40065; Mature: 39934

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNSGDLAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
VGGGDGGQYRGAQGLDPDFIAKLEKQFGFDKPPLERFVTMMWDYARFDFGESFFRNTPVI
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DLIVQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTFDVWTSGIIIVGYAVPSFLFG
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHHCCCEEEHHHHHHHHHH
ILLIVLFAGGSFFDWFPLRGLVSDNFEELTWYEKILDYFWHMTLPLITLLLSAFATTTLL
HHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKNSFIDEIKKQYVTTARAKGLNERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLIE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHH
YIFSLDGLGRLGYDAVVKRDYPIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFERRDV
HHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GAYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNSGDLAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
VGGGDGGQYRGAQGLDPDFIAKLEKQFGFDKPPLERFVTMMWDYARFDFGESFFRNTPVI
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DLIVQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTFDVWTSGIIIVGYAVPSFLFG
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHHCCCEEEHHHHHHHHHH
ILLIVLFAGGSFFDWFPLRGLVSDNFEELTWYEKILDYFWHMTLPLITLLLSAFATTTLL
HHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKNSFIDEIKKQYVTTARAKGLNERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLIE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHH
YIFSLDGLGRLGYDAVVKRDYPIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFERRDV
HHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]