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The map label for this gene is yejE [H]

Identifier: 150398553

GI number: 150398553

Start: 3564193

End: 3565323

Strand: Reverse

Name: yejE [H]

Synonym: Smed_3364

Alternate gene names: 150398553

Gene position: 3565323-3564193 (Counterclockwise)

Preceding gene: 150398554

Following gene: 150398552

Centisome position: 94.27

GC content: 62.07

Gene sequence:

>1131_bases
ATGAGCGCCGTCACCGCCTATGCCGCGCCGGAAAAGGGCTGGCTCACGCCGATCGGGCGCCGCCGCTGGCAGAATTTCAA
GGCCAACCGCCGCGGCTACTGGTCGTTCTGGCTTTTCCTTCTCCTGTTCGGCCTCAGCCTGTGTGCGGAGTTCATCGCCA
ACGACAAGCCGATCGTGGCCTCCTACAAGGGCGAGATCCTGTTTCCGGTGCTGATCGACTATCCGGAGGAGAAGTTCGGC
GGCTTTCTCGCCGTGACCGACTTCCGGTCCGACTTCATTCGCGACGAGATCGATGCGAATGGCTGGGCGATCTGGCCGCC
GATCCGCTATTCCTACCAGACGGTCAATTCCAACATTCCGCATTCGGCGCCGACGCCGCCATTCTGGCTGATGAGCGAGG
AAGAGCGCTGCTCCGCCTATCCGCAAGGGGCGGCCGATCCCGGATGCATGCTCGGCAATCTCAACTGGCTCGGCACCGAC
GACCAGGCGCGCGACGTCATGGCGCGGATGATTTACGGCTTCCGAATTTCGGTGCTCTTCGGGCTGGCGCTGACGATTGC
TTCCGCCGTCATCGGCGTTTCGGCCGGCGCCGTGCAGGGTTATTTCGGCGGCTGGACCGATCTGCTCATGCAGCGCTTCA
TCGAAATCTGGTCGTCGATGCCGGTGCTCTACATCCTGCTCATCATCGCCGCCATTCTGCCCCCCGGCTTCTTCATCCTG
CTCGGCATCATGCTGCTTTTCTCCTGGGTCGGCTTCGTTGGCGTCGTCAGGGCCGAATTCCTGCGCGCGCGCAATTTCGA
ATATGTGAACGCGGCGCGGGCACTCGGCGTCGGCAATGGCACCATCATGTATCGGCATCTCCTGCCGAACGCCATGGTCG
CAACGCTCACCTTCCTTCCCTTCATCCTTTCGGGGTCGATCACCACCCTCACCTCGCTCGACTTCCTTGGCTTCGGCATG
CCGCCCGGATCGCCTTCACTCGGCGAGATGATCGCGCAGGGCAAATCCAACCTGCAGGCGCCCTGGCTGGGATTGACGGC
CTTTTTTGCCATGTCGATCATGCTGTCGCTGCTGATCTTCGTCGGTGAGGCGACGCGCGACGCCTTTGATCCGAGAAAGA
CCTTCCGGTGA

Upstream 100 bases:

>100_bases
TCTTCATCTACTCGCTGATGGGACTCGTCGTGAGCCTCGTCTCGGATCTCATCTACACCTGGGTCGACCCACGCATCGAT
TTCGAGCGGAGGGACGTCTG

Downstream 100 bases:

>100_bases
GCGCCACGATGACAGACACCATCCTCTCCGTGCGCGACCTCTCCGTCGCCTTTCACCAGGGCGGCGAAACCTCGCTCGCC
GTCGATCGTATCTCGTTCGA

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSAVTAYAAPEKGWLTPIGRRRWQNFKANRRGYWSFWLFLLLFGLSLCAEFIANDKPIVASYKGEILFPVLIDYPEEKFG
GFLAVTDFRSDFIRDEIDANGWAIWPPIRYSYQTVNSNIPHSAPTPPFWLMSEEERCSAYPQGAADPGCMLGNLNWLGTD
DQARDVMARMIYGFRISVLFGLALTIASAVIGVSAGAVQGYFGGWTDLLMQRFIEIWSSMPVLYILLIIAAILPPGFFIL
LGIMLLFSWVGFVGVVRAEFLRARNFEYVNAARALGVGNGTIMYRHLLPNAMVATLTFLPFILSGSITTLTSLDFLGFGM
PPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFVGEATRDAFDPRKTFR

Sequences:

>Translated_376_residues
MSAVTAYAAPEKGWLTPIGRRRWQNFKANRRGYWSFWLFLLLFGLSLCAEFIANDKPIVASYKGEILFPVLIDYPEEKFG
GFLAVTDFRSDFIRDEIDANGWAIWPPIRYSYQTVNSNIPHSAPTPPFWLMSEEERCSAYPQGAADPGCMLGNLNWLGTD
DQARDVMARMIYGFRISVLFGLALTIASAVIGVSAGAVQGYFGGWTDLLMQRFIEIWSSMPVLYILLIIAAILPPGFFIL
LGIMLLFSWVGFVGVVRAEFLRARNFEYVNAARALGVGNGTIMYRHLLPNAMVATLTFLPFILSGSITTLTSLDFLGFGM
PPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFVGEATRDAFDPRKTFR
>Mature_375_residues
SAVTAYAAPEKGWLTPIGRRRWQNFKANRRGYWSFWLFLLLFGLSLCAEFIANDKPIVASYKGEILFPVLIDYPEEKFGG
FLAVTDFRSDFIRDEIDANGWAIWPPIRYSYQTVNSNIPHSAPTPPFWLMSEEERCSAYPQGAADPGCMLGNLNWLGTDD
QARDVMARMIYGFRISVLFGLALTIASAVIGVSAGAVQGYFGGWTDLLMQRFIEIWSSMPVLYILLIIAAILPPGFFILL
GIMLLFSWVGFVGVVRAEFLRARNFEYVNAARALGVGNGTIMYRHLLPNAMVATLTFLPFILSGSITTLTSLDFLGFGMP
PGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFVGEATRDAFDPRKTFR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=360, Percent_Identity=55.2777777777778, Blast_Score=406, Evalue=1e-115,
Organism=Escherichia coli, GI1787054, Length=221, Percent_Identity=29.8642533936652, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1789964, Length=220, Percent_Identity=32.7272727272727, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787760, Length=220, Percent_Identity=28.1818181818182, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1787498, Length=220, Percent_Identity=28.1818181818182, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=25.3112033195021, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1787549, Length=219, Percent_Identity=26.027397260274, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 41794; Mature: 41663

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVTAYAAPEKGWLTPIGRRRWQNFKANRRGYWSFWLFLLLFGLSLCAEFIANDKPIVA
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SYKGEILFPVLIDYPEEKFGGFLAVTDFRSDFIRDEIDANGWAIWPPIRYSYQTVNSNIP
ECCCCEEEEHEECCCHHHHCCEEEEEHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCC
HSAPTPPFWLMSEEERCSAYPQGAADPGCMLGNLNWLGTDDQARDVMARMIYGFRISVLF
CCCCCCCEEEECCHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GLALTIASAVIGVSAGAVQGYFGGWTDLLMQRFIEIWSSMPVLYILLIIAAILPPGFFIL
HHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH
LGIMLLFSWVGFVGVVRAEFLRARNFEYVNAARALGVGNGTIMYRHLLPNAMVATLTFLP
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHH
FILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIF
HHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
VGEATRDAFDPRKTFR
HHHHHHHHCCCHHCCC
>Mature Secondary Structure 
SAVTAYAAPEKGWLTPIGRRRWQNFKANRRGYWSFWLFLLLFGLSLCAEFIANDKPIVA
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SYKGEILFPVLIDYPEEKFGGFLAVTDFRSDFIRDEIDANGWAIWPPIRYSYQTVNSNIP
ECCCCEEEEHEECCCHHHHCCEEEEEHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCC
HSAPTPPFWLMSEEERCSAYPQGAADPGCMLGNLNWLGTDDQARDVMARMIYGFRISVLF
CCCCCCCEEEECCHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GLALTIASAVIGVSAGAVQGYFGGWTDLLMQRFIEIWSSMPVLYILLIIAAILPPGFFIL
HHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH
LGIMLLFSWVGFVGVVRAEFLRARNFEYVNAARALGVGNGTIMYRHLLPNAMVATLTFLP
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHH
FILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIF
HHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
VGEATRDAFDPRKTFR
HHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]