| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is yliJ [C]
Identifier: 150398512
GI number: 150398512
Start: 3520556
End: 3521197
Strand: Reverse
Name: yliJ [C]
Synonym: Smed_3323
Alternate gene names: 150398512
Gene position: 3521197-3520556 (Counterclockwise)
Preceding gene: 150398513
Following gene: 150398509
Centisome position: 93.11
GC content: 62.46
Gene sequence:
>642_bases ATGAAACTGTTCTACAGTCGCAATCCCAATCCGCGCCTCGCCGTAGCGGTGGCACGCCATCTAGGGGCTGGCGTCGAATA CGAGTTCGCCTCGCCCTTTTCAACGGGGCAGGCGGAGCGTTTTCGGCCACTCAATCCGAATCTTTCGCTGCCCATACTTG TCTGGTCGGGGGAAAGCCTCTGGGAGGCCGACGCGATCGCTTGCCGGCTTTCACGCGCGGTGGGCTCGGATTTCTGGCGC ACCGGCGACAATGAACCCGAGATGATCCGTTGGCTCAGCTGGGGCAAGGAGAATTTCGTGAGAGCATGCGACGTGGTGCA GTTCGAGCGGGGCACGAAGCTGCGCTATGGACTTGGGTCCACCGACCCGCGAATGGTCGAGGAGGGGCTGAACAATTTCC GCACGGCGGCCGCGATACTGGACGCCGCGCTTTCCGATCGAAGATGGCTTGCCGGAGATCGGCTTTCCTATGCGGACTTC CGGATGGCGACCTTCCTGCCCTTCAACGATGTGGCCGGATTGCCGCTTGGCGATTACCCTTCCGTCTGCCGCTGGTATGG CCGGCTCGAGGAGATCGATGCCTGGCGCGATCCCTTCAAGGGTTTGGATGCGCCGGAACTGCCCCCTGTCCCGGAGCGCT GA
Upstream 100 bases:
>100_bases GCGGGGCTCCAACCTCGCCGTCCACTTCGACCCTTCGCGCTGCCACGTCTTCGGTTCCGATGGCAGGGCGATGTAGAGCC GGCGTTTGGAGAGATTGAGA
Downstream 100 bases:
>100_bases AGCCGCCGCAGACACGAGGTTCAAAGACCGCGATCGTCGAAGCGGCGCACTGCGACGCCTGCCACCGGACTTTGTGCTGC AAATATCCCCCCCGACCGGC
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Domain Protein; Glutathione Transferase; Glutathione S-Transferase Domain; Glutathione S-Transferase-Like; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase C-Terminal Domain Protein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKLFYSRNPNPRLAVAVARHLGAGVEYEFASPFSTGQAERFRPLNPNLSLPILVWSGESLWEADAIACRLSRAVGSDFWR TGDNEPEMIRWLSWGKENFVRACDVVQFERGTKLRYGLGSTDPRMVEEGLNNFRTAAAILDAALSDRRWLAGDRLSYADF RMATFLPFNDVAGLPLGDYPSVCRWYGRLEEIDAWRDPFKGLDAPELPPVPER
Sequences:
>Translated_213_residues MKLFYSRNPNPRLAVAVARHLGAGVEYEFASPFSTGQAERFRPLNPNLSLPILVWSGESLWEADAIACRLSRAVGSDFWR TGDNEPEMIRWLSWGKENFVRACDVVQFERGTKLRYGLGSTDPRMVEEGLNNFRTAAAILDAALSDRRWLAGDRLSYADF RMATFLPFNDVAGLPLGDYPSVCRWYGRLEEIDAWRDPFKGLDAPELPPVPER >Mature_213_residues MKLFYSRNPNPRLAVAVARHLGAGVEYEFASPFSTGQAERFRPLNPNLSLPILVWSGESLWEADAIACRLSRAVGSDFWR TGDNEPEMIRWLSWGKENFVRACDVVQFERGTKLRYGLGSTDPRMVEEGLNNFRTAAAILDAALSDRRWLAGDRLSYADF RMATFLPFNDVAGLPLGDYPSVCRWYGRLEEIDAWRDPFKGLDAPELPPVPER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI17864592, Length=198, Percent_Identity=28.2828282828283, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24132; Mature: 24132
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFYSRNPNPRLAVAVARHLGAGVEYEFASPFSTGQAERFRPLNPNLSLPILVWSGESL CCEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH WEADAIACRLSRAVGSDFWRTGDNEPEMIRWLSWGKENFVRACDVVQFERGTKLRYGLGS HHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHEECCCCEEEECCCC TDPRMVEEGLNNFRTAAAILDAALSDRRWLAGDRLSYADFRMATFLPFNDVAGLPLGDYP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCH SVCRWYGRLEEIDAWRDPFKGLDAPELPPVPER HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKLFYSRNPNPRLAVAVARHLGAGVEYEFASPFSTGQAERFRPLNPNLSLPILVWSGESL CCEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH WEADAIACRLSRAVGSDFWRTGDNEPEMIRWLSWGKENFVRACDVVQFERGTKLRYGLGS HHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHEECCCCEEEECCCC TDPRMVEEGLNNFRTAAAILDAALSDRRWLAGDRLSYADFRMATFLPFNDVAGLPLGDYP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCH SVCRWYGRLEEIDAWRDPFKGLDAPELPPVPER HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA