| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is dinJ [C]
Identifier: 150398424
GI number: 150398424
Start: 3407676
End: 3407984
Strand: Reverse
Name: dinJ [C]
Synonym: Smed_3232
Alternate gene names: 150398424
Gene position: 3407984-3407676 (Counterclockwise)
Preceding gene: 150398433
Following gene: 150398423
Centisome position: 90.11
GC content: 64.72
Gene sequence:
>309_bases ATGGCCGCGAATGCTCTGGTTCAGACCCGTATCAATGCCGGAGTCCGGGATCGTGCATCCGCCGTGCTCGAAAGCATGGG GCTGACGGTCTCCGACGTCGTGCGGATCCTGCTCACCCGAACCGCCAATGAAGGCGTGCTGCCGCTCGAGCTGGTGACGG GCAGCGAGGCCCATGACGCCTGGTTCAGGGCTAAAGTGCTGCAGGCGCTGAACGATACCCGACCCGATGTTCCAGATCAC GAGGCAGAGGCGCATTTCGCGGAGCCGCGTGCGGCGGCACGCCACAAGGCGGGCAACCAGAACTCGTGA
Upstream 100 bases:
>100_bases TTACGTCCTTCATCGGGCATGCGTGCCGCATCTGCGGCCTGTAGAAGACTGGCATTGAGCATTCATTGCATTACATTTAG ATCGATGAAAGGAGGCGATA
Downstream 100 bases:
>100_bases TCTCGTATGGTCCGCCTTCGCGCTCCTCGACCGCGACGGCATTTTCACGCACATCGGCCGATAATCCCTCCGCCGCAGTC GCTGAACGGATCGCGGCCGC
Product: addiction module antitoxin
Products: NA
Alternate protein names: Addiction Module Antitoxin RelB/DinJ Family; RelB Antitoxin; Addiction Module Antitoxin Relb/Dinj Family; DNA-Damage-Inducible Protein; Damage-Inducible Protein J
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MAANALVQTRINAGVRDRASAVLESMGLTVSDVVRILLTRTANEGVLPLELVTGSEAHDAWFRAKVLQALNDTRPDVPDH EAEAHFAEPRAAARHKAGNQNS
Sequences:
>Translated_102_residues MAANALVQTRINAGVRDRASAVLESMGLTVSDVVRILLTRTANEGVLPLELVTGSEAHDAWFRAKVLQALNDTRPDVPDH EAEAHFAEPRAAARHKAGNQNS >Mature_101_residues AANALVQTRINAGVRDRASAVLESMGLTVSDVVRILLTRTANEGVLPLELVTGSEAHDAWFRAKVLQALNDTRPDVPDHE AEAHFAEPRAAARHKAGNQNS
Specific function: Unknown
COG id: COG3077
COG function: function code L; DNA-damage-inducible protein J
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10979; Mature: 10848
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANALVQTRINAGVRDRASAVLESMGLTVSDVVRILLTRTANEGVLPLELVTGSEAHDA CCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHH WFRAKVLQALNDTRPDVPDHEAEAHFAEPRAAARHKAGNQNS HHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHCCCCCCC >Mature Secondary Structure AANALVQTRINAGVRDRASAVLESMGLTVSDVVRILLTRTANEGVLPLELVTGSEAHDA CCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHH WFRAKVLQALNDTRPDVPDHEAEAHFAEPRAAARHKAGNQNS HHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA