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The map label for this gene is 150398358

Identifier: 150398358

GI number: 150398358

Start: 3327336

End: 3328856

Strand: Reverse

Name: 150398358

Synonym: Smed_3166

Alternate gene names: NA

Gene position: 3328856-3327336 (Counterclockwise)

Preceding gene: 150398359

Following gene: 150398357

Centisome position: 88.02

GC content: 62.98

Gene sequence:

>1521_bases
ATGAGCCAGAGCATGAAGAGCCAACCGGACATCGTCATCATCGGTTCGGGCGTCGGCGGCGCGACGGTTGCTGCCGGGCT
CGCCGCCTCCGGCGCCGAGATCCTCATTCTCGAAGCCGGCCACCACATCGAGGACCTGCCGGTAAATCGCGACCAGCGGG
CGATCTTCCAGCGCGGCCACTTCCGACCGAAGGAAACTTGGTATGAAGAGGGTGGTCCCGGCTTCAATCCCGGGAATTAC
TACAATGTCGGAGGCAATTCGAAATTCTACGGGGCGGTGCTCACCCGCTACCGTCGTGAGGATTTCGAGGAGATGCAGCA
TCTGGACGGTGTTTCGCCCGCCTGGCCGTTTCCCTATGAGGAGCTCGAACCGTGGTATTCGAAGGCGGAAGAGCTCTATC
AGGTGCGGGGCCGGCTCGGCGAAGATCCGACCGAGCCCGTTCATTCGCGCGATTACCCTCATGGTCCGGTGCCGGACGAA
CCGGCGATCGCCAAGGTCCGCAAGCGCCTGGCGGAGGTTGGGATGCACCCCTATTCGCTGCCGCTCGGGGTGGATATCGA
CCGATGGCTCGCCAAAGGCAAGACGCCCTGGGACGCGCATCCGAACGCCTTCGACGGAAAGATGGATGCCGAGACGGCAG
CTCTGGCGACAGCACTCGAGCATCCGAACGTGCACCTCCAGACCGGCTCTCGGGTGACGCGGCTTGCAACCGCGCCGGAC
GGCAAGGCAATCGAGACTGTTCACTACGTCAAGGATGGGACGGAGCACCGCATCTCGCCGAAGCTCGTGGTTCTCTCGGC
AGGCGCGGTTCAGTCGGCAGTCCTGCTTCTGCGCTCGGCGGACGACCGCAATGCGTCGGGGCTTGCCAACGGTTCCGATC
AGGTCGGCCGCAATTTCATGAACCACAATTCGAGCGCCGTCATTGCTCTCAGCCCCTGGTACCGCAACGATTCGGTTTAT
CAGAAGACCTTCGGTCTCAATGATTTCTATCTATCCGACGGGCAGGGCGGGCCGCCGCTCGGCAATATTCAGCTCCTCGG
CCGCATCTCCGGCGCGATCCTGAAGGCGAACATGCCCGGCTTGCCGGAATGGCTCCTGAACCAGGTATCGGCGCGCGGCA
TCGACTTCTACGCCATGAGCGAGGATCTGCCTTCGTCGGAAAGCCGCGTGATGGTCGATGGGGAGCGTGTCGTGCTGAAA
TGGGTACGCACGAATTGGCAGGCGCATCTCGACCTCGTCGCCAAGCTGAAGGCGGTGCTCAAAAAAGCCGGTTTCCCGAT
CGTGGTCGCGCGAGCCTTCGACAAGCGGACGCCGTCGCATCAATGCGGCACGGTGCGTATCGGCATCGATCCCGCACAGG
CGCCGCTCGACGTCTATTGCCGCGCCTTCGATCATCCGAACCTCTTCGTCGTAGATGCCAGCTGCCTGCCGACCTCGGCC
GCCGTCAATCCGGCGCTGACGGTCGCGGCCCAGGCGCTGCGCGTTGCGGACCATATCGTGAAACAGGACCTGCGATCATG
A

Upstream 100 bases:

>100_bases
TCAGGGCCGATGCCCGCATCGCGCCCGGCCAGACCGCGCGGCTCGCCTTCAATCTCGACAAAGCGGTGTTCTTCGACACC
GAAAGCGAGAAGCGGATCGC

Downstream 100 bases:

>100_bases
CCGAGAAGGCACGCCCCGTCGCGATCGTCACCGGCGGCCGCCGAGGCATCGGGCTCGGCATTGCCCGGGCGCTCGCGGTG
AGCGGCTTCGACATCGCCAT

Product: putative dehydrogenase transmembrane protein

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Choline Dehydrogenase; Flavoprotein Related Choline Dehydrogenase; Dehydrogenase; Dehydrogenase Subunit-Like Protein; GMC Oxidoreductase; Dehydrogenase Protein; Gluconate Dehydrogenase; Dehydrogenase Subunit; Dehydrogenase Large Subunit Protein; Glucose Dehydrogenase; Dehydrogenase-Like Protein; L-Sorbose Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Transmembrane Dehydrogenase Protein; Dehydrogenase Subunit I; Choline Dehydrogenase-Like Flavoprotein; Gluconate 2-Dehydrogenase; Glucose-Methanol-Choline Family Oxidoreductase; GMC Oxidoreductase Family; N-Terminal Membrane-Anchored Dehydrogenase; Gluconate Dehydrogenase Subunit; Dehydrogenase Transmembrane Protein

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MSQSMKSQPDIVIIGSGVGGATVAAGLAASGAEILILEAGHHIEDLPVNRDQRAIFQRGHFRPKETWYEEGGPGFNPGNY
YNVGGNSKFYGAVLTRYRREDFEEMQHLDGVSPAWPFPYEELEPWYSKAEELYQVRGRLGEDPTEPVHSRDYPHGPVPDE
PAIAKVRKRLAEVGMHPYSLPLGVDIDRWLAKGKTPWDAHPNAFDGKMDAETAALATALEHPNVHLQTGSRVTRLATAPD
GKAIETVHYVKDGTEHRISPKLVVLSAGAVQSAVLLLRSADDRNASGLANGSDQVGRNFMNHNSSAVIALSPWYRNDSVY
QKTFGLNDFYLSDGQGGPPLGNIQLLGRISGAILKANMPGLPEWLLNQVSARGIDFYAMSEDLPSSESRVMVDGERVVLK
WVRTNWQAHLDLVAKLKAVLKKAGFPIVVARAFDKRTPSHQCGTVRIGIDPAQAPLDVYCRAFDHPNLFVVDASCLPTSA
AVNPALTVAAQALRVADHIVKQDLRS

Sequences:

>Translated_506_residues
MSQSMKSQPDIVIIGSGVGGATVAAGLAASGAEILILEAGHHIEDLPVNRDQRAIFQRGHFRPKETWYEEGGPGFNPGNY
YNVGGNSKFYGAVLTRYRREDFEEMQHLDGVSPAWPFPYEELEPWYSKAEELYQVRGRLGEDPTEPVHSRDYPHGPVPDE
PAIAKVRKRLAEVGMHPYSLPLGVDIDRWLAKGKTPWDAHPNAFDGKMDAETAALATALEHPNVHLQTGSRVTRLATAPD
GKAIETVHYVKDGTEHRISPKLVVLSAGAVQSAVLLLRSADDRNASGLANGSDQVGRNFMNHNSSAVIALSPWYRNDSVY
QKTFGLNDFYLSDGQGGPPLGNIQLLGRISGAILKANMPGLPEWLLNQVSARGIDFYAMSEDLPSSESRVMVDGERVVLK
WVRTNWQAHLDLVAKLKAVLKKAGFPIVVARAFDKRTPSHQCGTVRIGIDPAQAPLDVYCRAFDHPNLFVVDASCLPTSA
AVNPALTVAAQALRVADHIVKQDLRS
>Mature_505_residues
SQSMKSQPDIVIIGSGVGGATVAAGLAASGAEILILEAGHHIEDLPVNRDQRAIFQRGHFRPKETWYEEGGPGFNPGNYY
NVGGNSKFYGAVLTRYRREDFEEMQHLDGVSPAWPFPYEELEPWYSKAEELYQVRGRLGEDPTEPVHSRDYPHGPVPDEP
AIAKVRKRLAEVGMHPYSLPLGVDIDRWLAKGKTPWDAHPNAFDGKMDAETAALATALEHPNVHLQTGSRVTRLATAPDG
KAIETVHYVKDGTEHRISPKLVVLSAGAVQSAVLLLRSADDRNASGLANGSDQVGRNFMNHNSSAVIALSPWYRNDSVYQ
KTFGLNDFYLSDGQGGPPLGNIQLLGRISGAILKANMPGLPEWLLNQVSARGIDFYAMSEDLPSSESRVMVDGERVVLKW
VRTNWQAHLDLVAKLKAVLKKAGFPIVVARAFDKRTPSHQCGTVRIGIDPAQAPLDVYCRAFDHPNLFVVDASCLPTSAA
VNPALTVAAQALRVADHIVKQDLRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55312; Mature: 55181

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS00221 MIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSMKSQPDIVIIGSGVGGATVAAGLAASGAEILILEAGHHIEDLPVNRDQRAIFQRGH
CCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCC
FRPKETWYEEGGPGFNPGNYYNVGGNSKFYGAVLTRYRREDFEEMQHLDGVSPAWPFPYE
CCCHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ELEPWYSKAEELYQVRGRLGEDPTEPVHSRDYPHGPVPDEPAIAKVRKRLAEVGMHPYSL
HHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PLGVDIDRWLAKGKTPWDAHPNAFDGKMDAETAALATALEHPNVHLQTGSRVTRLATAPD
CCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEECCC
GKAIETVHYVKDGTEHRISPKLVVLSAGAVQSAVLLLRSADDRNASGLANGSDQVGRNFM
CCCEEEEHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
NHNSSAVIALSPWYRNDSVYQKTFGLNDFYLSDGQGGPPLGNIQLLGRISGAILKANMPG
CCCCCEEEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEECCCCC
LPEWLLNQVSARGIDFYAMSEDLPSSESRVMVDGERVVLKWVRTNWQAHLDLVAKLKAVL
CHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCEEHHHHHCCHHHHHHHHHHHHHHH
KKAGFPIVVARAFDKRTPSHQCGTVRIGIDPAQAPLDVYCRAFDHPNLFVVDASCLPTSA
HHCCCCEEEEEHHHCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEECCCCCCCH
AVNPALTVAAQALRVADHIVKQDLRS
HCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQSMKSQPDIVIIGSGVGGATVAAGLAASGAEILILEAGHHIEDLPVNRDQRAIFQRGH
CCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCC
FRPKETWYEEGGPGFNPGNYYNVGGNSKFYGAVLTRYRREDFEEMQHLDGVSPAWPFPYE
CCCHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ELEPWYSKAEELYQVRGRLGEDPTEPVHSRDYPHGPVPDEPAIAKVRKRLAEVGMHPYSL
HHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PLGVDIDRWLAKGKTPWDAHPNAFDGKMDAETAALATALEHPNVHLQTGSRVTRLATAPD
CCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEECCC
GKAIETVHYVKDGTEHRISPKLVVLSAGAVQSAVLLLRSADDRNASGLANGSDQVGRNFM
CCCEEEEHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
NHNSSAVIALSPWYRNDSVYQKTFGLNDFYLSDGQGGPPLGNIQLLGRISGAILKANMPG
CCCCCEEEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEECCCCC
LPEWLLNQVSARGIDFYAMSEDLPSSESRVMVDGERVVLKWVRTNWQAHLDLVAKLKAVL
CHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCEEHHHHHCCHHHHHHHHHHHHHHH
KKAGFPIVVARAFDKRTPSHQCGTVRIGIDPAQAPLDVYCRAFDHPNLFVVDASCLPTSA
HHCCCCEEEEEHHHCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEECCCCCCCH
AVNPALTVAAQALRVADHIVKQDLRS
HCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA