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The map label for this gene is puuR [H]

Identifier: 150398353

GI number: 150398353

Start: 3321247

End: 3321795

Strand: Reverse

Name: puuR [H]

Synonym: Smed_3161

Alternate gene names: 150398353

Gene position: 3321795-3321247 (Counterclockwise)

Preceding gene: 150398355

Following gene: 150398348

Centisome position: 87.83

GC content: 63.39

Gene sequence:

>549_bases
ATGAGTGTCGATATCGGCAACCGGTTGCGGCGTGTGCGACTGAGGCACAATCTCTCCCAGCGCGAACTCGCCAAGCGGGC
GGGGGTGACCAACTCCACCATCTCCCTGATCGAATCCAATTCCTCGAACCCCTCGGTCGGTGCTTTGAAGCGAATCCTCG
ACGGTATCCCGATCGGGCTGGCGGAGTTTTTCTCCTTCGAGCCGGAGAAGCCGCGCAAGGCCTTCTATGCGGCGGAGGAG
CTGGTGGAAATCGGCAAGGGGCCGATCTCCTATCGTCAGATAGGCGACAATCTGTTCGGCCGCAGCCTGCAGATTCTGAA
GGAGTGCTACCAGCCGGGCGCGGACACAGGCAAGGTGCCGCTGGTGCATGAGGGCGAGGAGGGCGGGATCGTGCTTTCCG
GGCGGCTGGAAGTGACTGTCGAGGACGAGCGACGCATTCTCGGTCCGGGGGACGCCTATTATTTCGAGAGCCGGCGGCCG
CACCGCTTCCGCTGCGTCGGGCCGGTGCCGTGCGAAGTGATCAGCGCCTGTACGCCGCCGACGTTTTGA

Upstream 100 bases:

>100_bases
CGAACAAGTCCTTTTCTGGAGTTCTCTAAGTAATTGTATTTACATGATTGACGTTGCTAGAATTGCGAAATATCAAACAA
CGACAACACCGGAGTTTGCG

Downstream 100 bases:

>100_bases
TGGAAGTCGGGGTGTGAATGCCCCTCAACCGGCCGGCGGGCCGGATGAGGGGTCGTTTCAAGTCACCGGGCATCGGATAG
GAGCCGCGCCGCCCGAGTCC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSVDIGNRLRRVRLRHNLSQRELAKRAGVTNSTISLIESNSSNPSVGALKRILDGIPIGLAEFFSFEPEKPRKAFYAAEE
LVEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKVPLVHEGEEGGIVLSGRLEVTVEDERRILGPGDAYYFESRRP
HRFRCVGPVPCEVISACTPPTF

Sequences:

>Translated_182_residues
MSVDIGNRLRRVRLRHNLSQRELAKRAGVTNSTISLIESNSSNPSVGALKRILDGIPIGLAEFFSFEPEKPRKAFYAAEE
LVEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKVPLVHEGEEGGIVLSGRLEVTVEDERRILGPGDAYYFESRRP
HRFRCVGPVPCEVISACTPPTF
>Mature_181_residues
SVDIGNRLRRVRLRHNLSQRELAKRAGVTNSTISLIESNSSNPSVGALKRILDGIPIGLAEFFSFEPEKPRKAFYAAEEL
VEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKVPLVHEGEEGGIVLSGRLEVTVEDERRILGPGDAYYFESRRPH
RFRCVGPVPCEVISACTPPTF

Specific function: Represses puuD [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787557, Length=179, Percent_Identity=36.3128491620112, Blast_Score=114, Evalue=4e-27,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 20154; Mature: 20023

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDIGNRLRRVRLRHNLSQRELAKRAGVTNSTISLIESNSSNPSVGALKRILDGIPIGL
CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHCCCCCCH
AEFFSFEPEKPRKAFYAAEELVEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKVP
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LVHEGEEGGIVLSGRLEVTVEDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISACTPP
EEEECCCCCEEEECEEEEEECCCCEEECCCCCEEECCCCCCEEEEECCCCHHHHHCCCCC
TF
CC
>Mature Secondary Structure 
SVDIGNRLRRVRLRHNLSQRELAKRAGVTNSTISLIESNSSNPSVGALKRILDGIPIGL
CCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHCCCCCCH
AEFFSFEPEKPRKAFYAAEELVEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKVP
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LVHEGEEGGIVLSGRLEVTVEDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISACTPP
EEEECCCCCEEEECEEEEEECCCCEEECCCCCEEECCCCCCEEEEECCCCHHHHHCCCCC
TF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1840553 [H]