| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is mosC [H]
Identifier: 150398328
GI number: 150398328
Start: 3283841
End: 3285031
Strand: Reverse
Name: mosC [H]
Synonym: Smed_3134
Alternate gene names: 150398328
Gene position: 3285031-3283841 (Counterclockwise)
Preceding gene: 150398329
Following gene: 150398327
Centisome position: 86.86
GC content: 62.22
Gene sequence:
>1191_bases ATGGATCAGCGCACAGATTCCGCCCCGCAGGCCATTGGCCGGCAAGGATATATGTCCAGGAACCGGCTCGCCGTGTCTCT CCTGTTTCTTATGAACGGCTTCGTCACGGGTAGTTGGGCGCCCAAGATACCGGAGTTCAAGGAGCGCCTCGGCATAGGCG AAAGCGTCCTCGGACTTCTCATCCTGGGATTCGGCGTCGGTTCGCTGGTGCTGATGCCGATCGCAGGCGGCTTTATCGCC CGCCTCGGTTCGCAAAAGGTCGTCAAGGTCACGGCCATAATCCTTTCACCGCTGCTTCTCCTTCTGACGCTCCTGCCCAA TCTGTGGACGGCCGCGCTTGGTTTGTTCCTGCTCGGTGGCTTCGTGGGCGCAATGGACGTGGCCATGAACGCCAATGCCG TCGAGGTCGAAAAGTCGATGCGGCGCGCCATCATGTCATCGTGTCATGCCTATTGGAGCCTTGGCGGGTTGATCGGCGCG GGGATCGGCGGCTTCCTGATGGCACGTTTCGGCGTGCTGCCGCATGCGATGGTCGTTACCGTTCTCTGTCTCGTTATTCT CGCCGTTGCCTGGCCGATGATCCTCGCCGACCGGCCGCATCTGGCGGAAAGCCGGGAAAAGCTCCGCTTGCCGATGACGC CGCTGCCCTGGCTGATCGGCATCATGGCGCTTTTCTCGATGGTGCCCGAGGGAGCCGTCCTCGATTGGGGGGCGCTCTAT CTCAAGAATGAACTCGGCGCATCCGTCGAACTTTCAGGCTTTGGCTTTGCCGCCTTCTCGGCCACCATGGCGGCCATGCG CTTTGCCGGCGATCACGTGCGCGACCGGTTCGGAGCGAAGCGGACCCTGCGCATCTCCACCGTGACGGCGCTCGCCGGCA TGGTGCTCGCCGGCCTCGCCCCCAATGCCGTTCTTGCTATCCTCGGTTTTGCGCTTGCAGGCGTGGGGATATCCAACATG GTTCCGATCGCTTTCTCCGCGGCCGGCAACATGCCGGGCCTGCAGCCAGGAATAGGGCTGTCGGTCGCCACCACGATGGG TTATTCCGGCATGCTGTTTGCGCCCTCCTTGATCGGCTTCATCGCGGAACACAGCGGTTTTGCCATCGTTTTCGCATGCG TTCCCGTGCTCTTCATCGTCGTGCTCCTGCTCTCGCACCACGCCGTACACGCGGATCACGCCAAGGGGTAG
Upstream 100 bases:
>100_bases CCATTTCGACCTTGGGACCGAAGAAGCCGTGATCCCGACGTCAACTTCATCGAAAATCACCATTTGAGCCGGATCGATCC GGCAGCGGAAGGTTACTCCC
Downstream 100 bases:
>100_bases CGTCCTGCGGGCGGTACCAGCGGCGGCGGGCTCTCGCGCCCGCCTTGCCATCAATTCGCCGTCAGCGCGTGATGTTGCCG TTGACAAGCGGGCGTTCCTT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MDQRTDSAPQAIGRQGYMSRNRLAVSLLFLMNGFVTGSWAPKIPEFKERLGIGESVLGLLILGFGVGSLVLMPIAGGFIA RLGSQKVVKVTAIILSPLLLLLTLLPNLWTAALGLFLLGGFVGAMDVAMNANAVEVEKSMRRAIMSSCHAYWSLGGLIGA GIGGFLMARFGVLPHAMVVTVLCLVILAVAWPMILADRPHLAESREKLRLPMTPLPWLIGIMALFSMVPEGAVLDWGALY LKNELGASVELSGFGFAAFSATMAAMRFAGDHVRDRFGAKRTLRISTVTALAGMVLAGLAPNAVLAILGFALAGVGISNM VPIAFSAAGNMPGLQPGIGLSVATTMGYSGMLFAPSLIGFIAEHSGFAIVFACVPVLFIVVLLLSHHAVHADHAKG
Sequences:
>Translated_396_residues MDQRTDSAPQAIGRQGYMSRNRLAVSLLFLMNGFVTGSWAPKIPEFKERLGIGESVLGLLILGFGVGSLVLMPIAGGFIA RLGSQKVVKVTAIILSPLLLLLTLLPNLWTAALGLFLLGGFVGAMDVAMNANAVEVEKSMRRAIMSSCHAYWSLGGLIGA GIGGFLMARFGVLPHAMVVTVLCLVILAVAWPMILADRPHLAESREKLRLPMTPLPWLIGIMALFSMVPEGAVLDWGALY LKNELGASVELSGFGFAAFSATMAAMRFAGDHVRDRFGAKRTLRISTVTALAGMVLAGLAPNAVLAILGFALAGVGISNM VPIAFSAAGNMPGLQPGIGLSVATTMGYSGMLFAPSLIGFIAEHSGFAIVFACVPVLFIVVLLLSHHAVHADHAKG >Mature_396_residues MDQRTDSAPQAIGRQGYMSRNRLAVSLLFLMNGFVTGSWAPKIPEFKERLGIGESVLGLLILGFGVGSLVLMPIAGGFIA RLGSQKVVKVTAIILSPLLLLLTLLPNLWTAALGLFLLGGFVGAMDVAMNANAVEVEKSMRRAIMSSCHAYWSLGGLIGA GIGGFLMARFGVLPHAMVVTVLCLVILAVAWPMILADRPHLAESREKLRLPMTPLPWLIGIMALFSMVPEGAVLDWGALY LKNELGASVELSGFGFAAFSATMAAMRFAGDHVRDRFGAKRTLRISTVTALAGMVLAGLAPNAVLAILGFALAGVGISNM VPIAFSAAGNMPGLQPGIGLSVATTMGYSGMLFAPSLIGFIAEHSGFAIVFACVPVLFIVVLLLSHHAVHADHAKG
Specific function: May be a membrane transport protein that could either transport a precursor for rhizopine biosynthesis into bacteroids or the finished product from the bacteroids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787068, Length=366, Percent_Identity=28.6885245901639, Blast_Score=106, Evalue=3e-24,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41562; Mature: 41562
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQRTDSAPQAIGRQGYMSRNRLAVSLLFLMNGFVTGSWAPKIPEFKERLGIGESVLGLL CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHH ILGFGVGSLVLMPIAGGFIARLGSQKVVKVTAIILSPLLLLLTLLPNLWTAALGLFLLGG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGAMDVAMNANAVEVEKSMRRAIMSSCHAYWSLGGLIGAGIGGFLMARFGVLPHAMVVT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VLCLVILAVAWPMILADRPHLAESREKLRLPMTPLPWLIGIMALFSMVPEGAVLDWGALY HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHH LKNELGASVELSGFGFAAFSATMAAMRFAGDHVRDRFGAKRTLRISTVTALAGMVLAGLA HHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCC PNAVLAILGFALAGVGISNMVPIAFSAAGNMPGLQPGIGLSVATTMGYSGMLFAPSLIGF HHHHHHHHHHHHHHCCHHCCCCHHEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHH IAEHSGFAIVFACVPVLFIVVLLLSHHAVHADHAKG HHHCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCC >Mature Secondary Structure MDQRTDSAPQAIGRQGYMSRNRLAVSLLFLMNGFVTGSWAPKIPEFKERLGIGESVLGLL CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHH ILGFGVGSLVLMPIAGGFIARLGSQKVVKVTAIILSPLLLLLTLLPNLWTAALGLFLLGG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGAMDVAMNANAVEVEKSMRRAIMSSCHAYWSLGGLIGAGIGGFLMARFGVLPHAMVVT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VLCLVILAVAWPMILADRPHLAESREKLRLPMTPLPWLIGIMALFSMVPEGAVLDWGALY HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHH LKNELGASVELSGFGFAAFSATMAAMRFAGDHVRDRFGAKRTLRISTVTALAGMVLAGLA HHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCC PNAVLAILGFALAGVGISNMVPIAFSAAGNMPGLQPGIGLSVATTMGYSGMLFAPSLIGF HHHHHHHHHHHHHHCCHHCCCCHHEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHH IAEHSGFAIVFACVPVLFIVVLLLSHHAVHADHAKG HHHCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8349559; 7551036 [H]