| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is yfcF [C]
Identifier: 150398314
GI number: 150398314
Start: 3268940
End: 3269587
Strand: Reverse
Name: yfcF [C]
Synonym: Smed_3120
Alternate gene names: 150398314
Gene position: 3269587-3268940 (Counterclockwise)
Preceding gene: 150398315
Following gene: 150398313
Centisome position: 86.45
GC content: 63.27
Gene sequence:
>648_bases ATGGCCAAGCTCGTCCTCTATGTCGGCAACAAGAACTATTCGTCCTGGTCGCTCCGGCCATGGCTGGCACTCACGGCCAG CGGCATTCCGTTCGAAGAGGTCGTCATTCCCTTCGACTTTCCCGCCGGCAACCCCCGCATTCGCGAGATGTCGCCGACAG GACGTGTTCCGGTACTCCATCATGGCGAAACCCGCGTGTGGGAATCGCTCGCCATTATCGAATATGCGGCGGAGCTCTTT CCGGAGGCTGGCCTCTGGCCCGATAGCCGCGAGGATCGCGCACGCGCGCGGAGCTATTCGATGGAGATGCTCTCCGGCTT CCAGGCACTGCGCGGCGCCTGCCCCATGAACATCCGCCGGTCGAAGAAGGCGATCGATCTGCCCGACGGCGTTACCGAGG ATGTGGCGCGGATCGAGACGATCTGGCACGAGCAAACCGCGCGGTCTGGCGGTCCGTTCCTCTTTGGCCGGTTCACCGCC GCGGATGCCATGTTCGCACCTGTCGTCATCCGCTTCGAAGTCTATGACCTCGTGAAAGATCCGGCGACGCTTGCCTATAT GGCGGCCGTCCGAGGGCATCCGGCCTTCCGCAAGTGGGAAGAGGCCGCGAAAGCCGAGCCCTGGATCGTTCCGGAGGATG AAGCCTGA
Upstream 100 bases:
>100_bases TATCACGTGTCTTTATGATTGAGATGAATCCAATTCATTGGTCTGTCGGCCTTTGATGTGGCAAGGCTGCCGTCCGGAAC TTCAGGCGGAGACAAAAATC
Downstream 100 bases:
>100_bases ATCGAAAATTTGTGCGCGGGGACTGGTCAAACTGCGGTCCGGCATGTATAAGCGCGCGAAATTCCGAGATCGACATCTGT TTGACCCGGCCATTTTCGGC
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MAKLVLYVGNKNYSSWSLRPWLALTASGIPFEEVVIPFDFPAGNPRIREMSPTGRVPVLHHGETRVWESLAIIEYAAELF PEAGLWPDSREDRARARSYSMEMLSGFQALRGACPMNIRRSKKAIDLPDGVTEDVARIETIWHEQTARSGGPFLFGRFTA ADAMFAPVVIRFEVYDLVKDPATLAYMAAVRGHPAFRKWEEAAKAEPWIVPEDEA
Sequences:
>Translated_215_residues MAKLVLYVGNKNYSSWSLRPWLALTASGIPFEEVVIPFDFPAGNPRIREMSPTGRVPVLHHGETRVWESLAIIEYAAELF PEAGLWPDSREDRARARSYSMEMLSGFQALRGACPMNIRRSKKAIDLPDGVTEDVARIETIWHEQTARSGGPFLFGRFTA ADAMFAPVVIRFEVYDLVKDPATLAYMAAVRGHPAFRKWEEAAKAEPWIVPEDEA >Mature_214_residues AKLVLYVGNKNYSSWSLRPWLALTASGIPFEEVVIPFDFPAGNPRIREMSPTGRVPVLHHGETRVWESLAIIEYAAELFP EAGLWPDSREDRARARSYSMEMLSGFQALRGACPMNIRRSKKAIDLPDGVTEDVARIETIWHEQTARSGGPFLFGRFTAA DAMFAPVVIRFEVYDLVKDPATLAYMAAVRGHPAFRKWEEAAKAEPWIVPEDEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24181; Mature: 24050
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLVLYVGNKNYSSWSLRPWLALTASGIPFEEVVIPFDFPAGNPRIREMSPTGRVPVLH CCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHEEEEECCCCCCCEEEECCCCCCCCEEE HGETRVWESLAIIEYAAELFPEAGLWPDSREDRARARSYSMEMLSGFQALRGACPMNIRR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SKKAIDLPDGVTEDVARIETIWHEQTARSGGPFLFGRFTAADAMFAPVVIRFEVYDLVKD CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHEEEEEEHHHHHCC PATLAYMAAVRGHPAFRKWEEAAKAEPWIVPEDEA CHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AKLVLYVGNKNYSSWSLRPWLALTASGIPFEEVVIPFDFPAGNPRIREMSPTGRVPVLH CEEEEEECCCCCCCCCCCCEEEEEECCCCHHHEEEEECCCCCCCEEEECCCCCCCCEEE HGETRVWESLAIIEYAAELFPEAGLWPDSREDRARARSYSMEMLSGFQALRGACPMNIRR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SKKAIDLPDGVTEDVARIETIWHEQTARSGGPFLFGRFTAADAMFAPVVIRFEVYDLVKD CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHEEEEEEHHHHHCC PATLAYMAAVRGHPAFRKWEEAAKAEPWIVPEDEA CHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA