| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150398275
Identifier: 150398275
GI number: 150398275
Start: 3228016
End: 3228426
Strand: Reverse
Name: 150398275
Synonym: Smed_3081
Alternate gene names: NA
Gene position: 3228426-3228016 (Counterclockwise)
Preceding gene: 150398276
Following gene: 150398274
Centisome position: 85.37
GC content: 57.66
Gene sequence:
>411_bases ATGCCGATGACTGATGAAACGGATTTGCCGCGAGGCGAAGCACGTCACTACGGCCAGACCACCTCCGATGTGGTCGTCGA TCTTCACGAATACAAGCAAGCCAGGAACCCACCGCCCATCACCTTCCATCGCCGCGAACTCGACCTGATCCTCAAGGTCT ATGGTCGAATGGTGGGCGAAGGGGAGTGGCGCGACTATGCCATCGACCACCTCCGGGACCGGGCCGTTTTCTCGGTATTC AAGCGTGCCGGAGAAGTGCCTCTCTACCGCATCGAAAAAAACCCGAAGCTGGCCGCCAAACAGGGCGCCTTCAGCGTGCT CAACGCTCACGGGACCATATTGAAACGCGGCCACGAGCTCTCTCAGGTGCTGAAGATCTTCGAGAAGATTCTGAAGCTCG TGAAATCCTGA
Upstream 100 bases:
>100_bases GGCAGCCCCAAGAATTGCTGACATTGATCAACAGCTTCCGGCTTGCTTTTCGGATTGTGTGAGGCACACTGTCGTGGTCC TGTCACATTAGAAGGCCGAA
Downstream 100 bases:
>100_bases CGAGGCGCTTCGCGCTGCTGGAAGGATTCTCTTCCATCCCTCATCGAGACCGGCGATCGGCCGGAGGAGCGGGTGTGCTC CCCAACGACAGTAGCATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MPMTDETDLPRGEARHYGQTTSDVVVDLHEYKQARNPPPITFHRRELDLILKVYGRMVGEGEWRDYAIDHLRDRAVFSVF KRAGEVPLYRIEKNPKLAAKQGAFSVLNAHGTILKRGHELSQVLKIFEKILKLVKS
Sequences:
>Translated_136_residues MPMTDETDLPRGEARHYGQTTSDVVVDLHEYKQARNPPPITFHRRELDLILKVYGRMVGEGEWRDYAIDHLRDRAVFSVF KRAGEVPLYRIEKNPKLAAKQGAFSVLNAHGTILKRGHELSQVLKIFEKILKLVKS >Mature_135_residues PMTDETDLPRGEARHYGQTTSDVVVDLHEYKQARNPPPITFHRRELDLILKVYGRMVGEGEWRDYAIDHLRDRAVFSVFK RAGEVPLYRIEKNPKLAAKQGAFSVLNAHGTILKRGHELSQVLKIFEKILKLVKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15665; Mature: 15534
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMTDETDLPRGEARHYGQTTSDVVVDLHEYKQARNPPPITFHRRELDLILKVYGRMVGE CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHCC GEWRDYAIDHLRDRAVFSVFKRAGEVPLYRIEKNPKLAAKQGAFSVLNAHGTILKRGHEL CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHH SQVLKIFEKILKLVKS HHHHHHHHHHHHHHCC >Mature Secondary Structure PMTDETDLPRGEARHYGQTTSDVVVDLHEYKQARNPPPITFHRRELDLILKVYGRMVGE CCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHCC GEWRDYAIDHLRDRAVFSVFKRAGEVPLYRIEKNPKLAAKQGAFSVLNAHGTILKRGHEL CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHH SQVLKIFEKILKLVKS HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA