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The map label for this gene is ybhL [C]

Identifier: 150398270

GI number: 150398270

Start: 3225083

End: 3225820

Strand: Direct

Name: ybhL [C]

Synonym: Smed_3076

Alternate gene names: 150398270

Gene position: 3225083-3225820 (Clockwise)

Preceding gene: 150398269

Following gene: 150398271

Centisome position: 85.28

GC content: 58.67

Gene sequence:

>738_bases
ATGGCTGATCTGAGAAACTACCAAACCCGAATGTCGCCCGCCGGCGCTCAGGCGGGTGCCGTGATCGACGAAGGCCTTCG
CGCTTATATGCTGAAGGTCTACAACCTGATGGCCCTCGGCCTGGCGATCACAGGCGTGGCAGCTTACGGAACCTATGCGC
TTGCCGCCTCTAATCCGGCATTCGCCCAGCTTATCTACGCTTCGCCTCTCAAGTGGGTCGTGATGCTGGCGCCGCTTGCG
CTGGTTTTCTTCCTGAGCTTCCGCATCAATTCCATGAGCGTTGCCACGGCGCAGATGACGTTCTGGGTCTATGCGGCGCT
GATGGGCCTGTCGCTCTCGTCGATCTTCCTGGTCTTCACCGGCCAGAGCATCGTGCAGACCTTCTTCGTAACGGCGGCTT
CGTTCGGCGCCCTGTCGCTTTACGGCTACACGACGAAGAAGGATCTCTCCGGTCTCGGCTCGTTCCTGATCATGGGTCTG
TTCGGCGTGATCATCGCATCCGTCGTCAACATCTTCCTAGCCTCTTCGGCACTCGGCTTCGCGATCTCGGTGATCGGCGT
GCTTATCTTCGCCGGCCTGACCGCGTACGACACGCAGAAGCTCAAGGAAATGTATTTCGAAGGCGATGATGCGCTGGTCG
CCGGCCGCAAGGCCATCATGGGCGCGCTGACACTGTATCTCGACTTCATCAACCTGTTCATGTTCATGCTGCAGTTCCTT
GGCAACAGGAACGAGTAG

Upstream 100 bases:

>100_bases
AGGCATGCTGGAGCCCCGCAGCGGCGCCTGGGCGCGCAAGGAAACGACAAAGTTCGCCGCCCGACACCGTAACTTCAACC
GGGGCTTAAAAGAGGAAACA

Downstream 100 bases:

>100_bases
CTCGGACGAATGATGAAAAAGGCGGCTTCGGCCGCCTTTTTTGTTGGCCGAGCCTATCCAACTTCAGTTGTGCCCAGAAA
CACGCGAAGATTTCCATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MADLRNYQTRMSPAGAQAGAVIDEGLRAYMLKVYNLMALGLAITGVAAYGTYALAASNPAFAQLIYASPLKWVVMLAPLA
LVFFLSFRINSMSVATAQMTFWVYAALMGLSLSSIFLVFTGQSIVQTFFVTAASFGALSLYGYTTKKDLSGLGSFLIMGL
FGVIIASVVNIFLASSALGFAISVIGVLIFAGLTAYDTQKLKEMYFEGDDALVAGRKAIMGALTLYLDFINLFMFMLQFL
GNRNE

Sequences:

>Translated_245_residues
MADLRNYQTRMSPAGAQAGAVIDEGLRAYMLKVYNLMALGLAITGVAAYGTYALAASNPAFAQLIYASPLKWVVMLAPLA
LVFFLSFRINSMSVATAQMTFWVYAALMGLSLSSIFLVFTGQSIVQTFFVTAASFGALSLYGYTTKKDLSGLGSFLIMGL
FGVIIASVVNIFLASSALGFAISVIGVLIFAGLTAYDTQKLKEMYFEGDDALVAGRKAIMGALTLYLDFINLFMFMLQFL
GNRNE
>Mature_244_residues
ADLRNYQTRMSPAGAQAGAVIDEGLRAYMLKVYNLMALGLAITGVAAYGTYALAASNPAFAQLIYASPLKWVVMLAPLAL
VFFLSFRINSMSVATAQMTFWVYAALMGLSLSSIFLVFTGQSIVQTFFVTAASFGALSLYGYTTKKDLSGLGSFLIMGLF
GVIIASVVNIFLASSALGFAISVIGVLIFAGLTAYDTQKLKEMYFEGDDALVAGRKAIMGALTLYLDFINLFMFMLQFLG
NRNE

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=223, Percent_Identity=49.3273542600897, Blast_Score=189, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 26392; Mature: 26260

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure 
ADLRNYQTRMSPAGAQAGAVIDEGLRAYMLKVYNLMALGLAITGVAAYGTYALAASNPA
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHH
FAQLIYASPLKWVVMLAPLALVFFLSFRINSMSVATAQMTFWVYAALMGLSLSSIFLVFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQSIVQTFFVTAASFGALSLYGYTTKKDLSGLGSFLIMGLFGVIIASVVNIFLASSALGF
CHHHHHHHHHHHHHHCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISVIGVLIFAGLTAYDTQKLKEMYFEGDDALVAGRKAIMGALTLYLDFINLFMFMLQFL
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNRNE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]