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The map label for this gene is ybbP [H]

Identifier: 150398269

GI number: 150398269

Start: 3222244

End: 3224835

Strand: Direct

Name: ybbP [H]

Synonym: Smed_3075

Alternate gene names: 150398269

Gene position: 3222244-3224835 (Clockwise)

Preceding gene: 150398268

Following gene: 150398270

Centisome position: 85.2

GC content: 64.24

Gene sequence:

>2592_bases
ATGAGCGAGGCAGCTGCCGTCCGACGCACTCGCCCCCTGTTTGCGCTTCGCCCCCTCTTCGCACTTCGCCCCCTCTTCGC
ACTTCGATTGGCGCTCAGGGAAATGCGTGGAGGTCTGAAGGGCTTTTACATTTTCCTCGCCTGTATCGCCCTCGGCACGG
CGGCGATTGCCGGAGTCAACTCGCTATCGCAATCGATCAGCGAAACGATTGCCTCGCGGGGGCAGGAACTGCTCGCCGGC
GACATCCGCTTCGAGCTCAACAATCGCGTGGCGACGGCGGATGAGCGCGCCTTCCTCCAGGGGCTGGGCGATGTCTCGGT
GTCCGCGGGGCTGCGCTCCATGGCACGTCTTCCGGACGGCTCCAACCAGGCGCTCGTCGAGCTCAAGGCCGTTGATGGCG
CCTATCCGCTCTATGGCAAGCTGGAAAGCGATCCGGCAAAGCCGGTCCCTGAACTGCTGGCGAAGGAAGGTGAGATCTTC
GGGGCAATCGCCGCGCCGCTGCTGCTTGAGCGCCTCGGCGTCACGCCTGGCGCGGAAATCTTCATCGGCAATGCACGCGT
CCGGATCAGCGCCTCCCTTGTCAGCGAACCCGACGCTCTTTCCGACGGCTTCGGTTTCGCGCCGCGGCTGATGATTTCCT
CGGAGGCGCTTGTCGCTTCGGGGCTCGTGCAGACCGGCAGCCTCGTCGAACATACCTACAAGATCCGCCTGCCCGACCCC
GCGGACGTGCCCGTCATTCGCGCCCAGGCGGAGACGCGCTTTCCCTCCGCCGGCTGGTCTATCCGGACGAGCGGCAATGC
CGCACCGTCTCTGAACGCGAACATCACCCGATTCTCCCAATTTCTGACGCTCGTCGGGCTCACGGCGCTGATCGTCGGCG
GCGTCGGCGTGGCCAATGCCGTGCGCTCCTATCTCGACGGCAAACGCAGCGTCATCGCCACTTTCAAGTGCCTCGGCGCT
CCGGCATCGCTAGTCGCGATGATCTATCTTTCGCAGATCCTGATGATCGCCCTTGTCGGTATCGGCATCGGCATCGCCAT
CGGTGCCTTCATCCCCTTCGTGGCGGCGCAGTTTCTCGCCGGCGTGCTGCCAGTCTCCACCGCATTCGAGCTCTACCCTT
CGGCTCTGGGCCTTGCGGCACTTTTCGGCCTCCTGACGGCCCTTACCTTCGCCATTCTGCCGCTTGGGCGAGCACGCCGG
GTGCCGGCCACCGCACTTTTCCGGCAGCAGGGATTCGAACCTACGGGCTTTCCCCCGCTGGCCTATCTCACCGGAGCCTT
CATCTGCCTGGCGGCACTTGCCGGGCTTGCTGTCTGGACTGCCTATGACCAGTACATTTCACTGGTCTTCCTCGGCGCGA
TCGCCTTTGCCTTCATCGTGCTGCGCGGCGTTTCGCTCCTGATATCGTGGCTCGCGCGGCGCAGCCCGCGCGTCCATTCG
CCGGCTCTGCGATTGGCCATCGGCAATATTCATCGGCCGGGGGCACTGACACCATCCGTGGTATTGTCGCTTGGCCTCGG
CCTGGCCCTTCTGGTGACCCTGGCGCTGATCGACGGCAATCTCAGGCGTGAGCTCACCGGCGACATGGCCGAGCGCGCTC
CCAACTTCTTCTTCGTCGACATTCAGAGCAGCGAGATCGAAGGCTTCCGTTCCCTGCTCGCGGGAGCAATGCCGGAGGGC
AAGATCATCGAGGTGCCTATGCTGCGCGGGCGCATCGTGGCGCTCAACGGCGAAGATGTGAACAGCCGCAACGTTCCGCC
GGGAGGGCAATGGGTGCTGCGCGGCGACCGTGGCATCACCTACGCCAGGAACAGGCCCGAAAACTCGAAGCTCACCGAAG
GCAGCTGGTGGCCGGAGGACTATGGCGGCGAGCCCCTCGTCTCCTTCTCGGCCGAGGAGGCCCGCGAACTCGGGTTGAAG
CTCGGCGATACGGTGACCGTCAACGTACTCGGCCGCAACATCACGGCAAGAATCTCGAATTTCCGCGAAGTCGAATGGGA
ATCGCTGTCGATCAATTTCGTCATGGTCTTCTCGCCGAATACCTTTGCCGGCGCCCCGCATGCCTGGCTCGCGACGATTA
TCGATCCCGACGCCTCCGCGCAGGAGGAGGCGGCGGTCTTGAAGACGGTGACCAATACCTATCCCACCATCACGAGCGTG
CGCGTCAAGGACGCGCTCGATATCGTCAACACTCTGCTCGGACAGCTTGCAACGGCAGTTAGAGCCGCTGCGGCGGTCGC
GCTGGTCGCGTCCATCCTCGTGCTCGCCGGTGCACTTGCTGCCGGCAATCGTGCCCGGATCCATGATGCGGTCGTCCTGA
AGACACTCGGCGCCACACGGGCCACGCTCATCCGCGCCTTCAGCTACGAATACATCATCCTCGGCCTGGCGACGGCGGTG
TTCGCACTGTTCGCCGGTGGCGTTTCGGCCTGGTTCGTCGTCAGTCGCATCATGACCCTGCCCTCGAGCTTCCTGCCGGA
CGTCGCGATTGCGACGATCATCCTGGCGCTGGTCGTGACGGTGGGGATTGGCCTTGCCGGCACCTGGCGCGTCCTCGGGC
AAAAAGCCGCTCCGGTGCTACGGGAACTTTGA

Upstream 100 bases:

>100_bases
TGGCCGGGCGCTGCGAACGGCAGGTGCGCGTCCGCTCCGGTGAAATCGTCTCCGACGCGGAACGGCTCTCTGCCTCGACC
CGGCAGGGAGCCGTGTCAGC

Downstream 100 bases:

>100_bases
GCTTGCGGTCATTTTGCAGCGCTTACGGCCCTGATCGCCGAATTAACCGTAAATCACTTCAGTTTGATGGCCCGACTGCC
CGGCTTTGTGCGATTCCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 863; Mature: 862

Protein sequence:

>863_residues
MSEAAAVRRTRPLFALRPLFALRPLFALRLALREMRGGLKGFYIFLACIALGTAAIAGVNSLSQSISETIASRGQELLAG
DIRFELNNRVATADERAFLQGLGDVSVSAGLRSMARLPDGSNQALVELKAVDGAYPLYGKLESDPAKPVPELLAKEGEIF
GAIAAPLLLERLGVTPGAEIFIGNARVRISASLVSEPDALSDGFGFAPRLMISSEALVASGLVQTGSLVEHTYKIRLPDP
ADVPVIRAQAETRFPSAGWSIRTSGNAAPSLNANITRFSQFLTLVGLTALIVGGVGVANAVRSYLDGKRSVIATFKCLGA
PASLVAMIYLSQILMIALVGIGIGIAIGAFIPFVAAQFLAGVLPVSTAFELYPSALGLAALFGLLTALTFAILPLGRARR
VPATALFRQQGFEPTGFPPLAYLTGAFICLAALAGLAVWTAYDQYISLVFLGAIAFAFIVLRGVSLLISWLARRSPRVHS
PALRLAIGNIHRPGALTPSVVLSLGLGLALLVTLALIDGNLRRELTGDMAERAPNFFFVDIQSSEIEGFRSLLAGAMPEG
KIIEVPMLRGRIVALNGEDVNSRNVPPGGQWVLRGDRGITYARNRPENSKLTEGSWWPEDYGGEPLVSFSAEEARELGLK
LGDTVTVNVLGRNITARISNFREVEWESLSINFVMVFSPNTFAGAPHAWLATIIDPDASAQEEAAVLKTVTNTYPTITSV
RVKDALDIVNTLLGQLATAVRAAAAVALVASILVLAGALAAGNRARIHDAVVLKTLGATRATLIRAFSYEYIILGLATAV
FALFAGGVSAWFVVSRIMTLPSSFLPDVAIATIILALVVTVGIGLAGTWRVLGQKAAPVLREL

Sequences:

>Translated_863_residues
MSEAAAVRRTRPLFALRPLFALRPLFALRLALREMRGGLKGFYIFLACIALGTAAIAGVNSLSQSISETIASRGQELLAG
DIRFELNNRVATADERAFLQGLGDVSVSAGLRSMARLPDGSNQALVELKAVDGAYPLYGKLESDPAKPVPELLAKEGEIF
GAIAAPLLLERLGVTPGAEIFIGNARVRISASLVSEPDALSDGFGFAPRLMISSEALVASGLVQTGSLVEHTYKIRLPDP
ADVPVIRAQAETRFPSAGWSIRTSGNAAPSLNANITRFSQFLTLVGLTALIVGGVGVANAVRSYLDGKRSVIATFKCLGA
PASLVAMIYLSQILMIALVGIGIGIAIGAFIPFVAAQFLAGVLPVSTAFELYPSALGLAALFGLLTALTFAILPLGRARR
VPATALFRQQGFEPTGFPPLAYLTGAFICLAALAGLAVWTAYDQYISLVFLGAIAFAFIVLRGVSLLISWLARRSPRVHS
PALRLAIGNIHRPGALTPSVVLSLGLGLALLVTLALIDGNLRRELTGDMAERAPNFFFVDIQSSEIEGFRSLLAGAMPEG
KIIEVPMLRGRIVALNGEDVNSRNVPPGGQWVLRGDRGITYARNRPENSKLTEGSWWPEDYGGEPLVSFSAEEARELGLK
LGDTVTVNVLGRNITARISNFREVEWESLSINFVMVFSPNTFAGAPHAWLATIIDPDASAQEEAAVLKTVTNTYPTITSV
RVKDALDIVNTLLGQLATAVRAAAAVALVASILVLAGALAAGNRARIHDAVVLKTLGATRATLIRAFSYEYIILGLATAV
FALFAGGVSAWFVVSRIMTLPSSFLPDVAIATIILALVVTVGIGLAGTWRVLGQKAAPVLREL
>Mature_862_residues
SEAAAVRRTRPLFALRPLFALRPLFALRLALREMRGGLKGFYIFLACIALGTAAIAGVNSLSQSISETIASRGQELLAGD
IRFELNNRVATADERAFLQGLGDVSVSAGLRSMARLPDGSNQALVELKAVDGAYPLYGKLESDPAKPVPELLAKEGEIFG
AIAAPLLLERLGVTPGAEIFIGNARVRISASLVSEPDALSDGFGFAPRLMISSEALVASGLVQTGSLVEHTYKIRLPDPA
DVPVIRAQAETRFPSAGWSIRTSGNAAPSLNANITRFSQFLTLVGLTALIVGGVGVANAVRSYLDGKRSVIATFKCLGAP
ASLVAMIYLSQILMIALVGIGIGIAIGAFIPFVAAQFLAGVLPVSTAFELYPSALGLAALFGLLTALTFAILPLGRARRV
PATALFRQQGFEPTGFPPLAYLTGAFICLAALAGLAVWTAYDQYISLVFLGAIAFAFIVLRGVSLLISWLARRSPRVHSP
ALRLAIGNIHRPGALTPSVVLSLGLGLALLVTLALIDGNLRRELTGDMAERAPNFFFVDIQSSEIEGFRSLLAGAMPEGK
IIEVPMLRGRIVALNGEDVNSRNVPPGGQWVLRGDRGITYARNRPENSKLTEGSWWPEDYGGEPLVSFSAEEARELGLKL
GDTVTVNVLGRNITARISNFREVEWESLSINFVMVFSPNTFAGAPHAWLATIIDPDASAQEEAAVLKTVTNTYPTITSVR
VKDALDIVNTLLGQLATAVRAAAAVALVASILVLAGALAAGNRARIHDAVVLKTLGATRATLIRAFSYEYIILGLATAVF
ALFAGGVSAWFVVSRIMTLPSSFLPDVAIATIILALVVTVGIGLAGTWRVLGQKAAPVLREL

Specific function: Unknown

COG id: COG3127

COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1786704, Length=839, Percent_Identity=24.9106078665077, Blast_Score=175, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 91289; Mature: 91157

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAAAVRRTRPLFALRPLFALRPLFALRLALREMRGGLKGFYIFLACIALGTAAIAGVN
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SLSQSISETIASRGQELLAGDIRFELNNRVATADERAFLQGLGDVSVSAGLRSMARLPDG
HHHHHHHHHHHHCCHHHHCCCEEEEECCCEECCHHHHHHHHCCCHHHHHHHHHHHHCCCC
SNQALVELKAVDGAYPLYGKLESDPAKPVPELLAKEGEIFGAIAAPLLLERLGVTPGAEI
CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEE
FIGNARVRISASLVSEPDALSDGFGFAPRLMISSEALVASGLVQTGSLVEHTYKIRLPDP
EECCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCHHHHCEEEEECCCC
ADVPVIRAQAETRFPSAGWSIRTSGNAAPSLNANITRFSQFLTLVGLTALIVGGVGVANA
CCCCEEECCHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
VRSYLDGKRSVIATFKCLGAPASLVAMIYLSQILMIALVGIGIGIAIGAFIPFVAAQFLA
HHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLPVSTAFELYPSALGLAALFGLLTALTFAILPLGRARRVPATALFRQQGFEPTGFPPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCHH
AYLTGAFICLAALAGLAVWTAYDQYISLVFLGAIAFAFIVLRGVSLLISWLARRSPRVHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PALRLAIGNIHRPGALTPSVVLSLGLGLALLVTLALIDGNLRRELTGDMAERAPNFFFVD
CHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEE
IQSSEIEGFRSLLAGAMPEGKIIEVPMLRGRIVALNGEDVNSRNVPPGGQWVLRGDRGIT
ECCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCE
YARNRPENSKLTEGSWWPEDYGGEPLVSFSAEEARELGLKLGDTVTVNVLGRNITARISN
ECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCEEEEEEECCCHHHHHCC
FREVEWESLSINFVMVFSPNTFAGAPHAWLATIIDPDASAQEEAAVLKTVTNTYPTITSV
CHHCCEEEEEEEEEEEECCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCCCCEEEE
RVKDALDIVNTLLGQLATAVRAAAAVALVASILVLAGALAAGNRARIHDAVVLKTLGATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH
ATLIRAFSYEYIILGLATAVFALFAGGVSAWFVVSRIMTLPSSFLPDVAIATIILALVVT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH
VGIGLAGTWRVLGQKAAPVLREL
HHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEAAAVRRTRPLFALRPLFALRPLFALRLALREMRGGLKGFYIFLACIALGTAAIAGVN
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SLSQSISETIASRGQELLAGDIRFELNNRVATADERAFLQGLGDVSVSAGLRSMARLPDG
HHHHHHHHHHHHCCHHHHCCCEEEEECCCEECCHHHHHHHHCCCHHHHHHHHHHHHCCCC
SNQALVELKAVDGAYPLYGKLESDPAKPVPELLAKEGEIFGAIAAPLLLERLGVTPGAEI
CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEE
FIGNARVRISASLVSEPDALSDGFGFAPRLMISSEALVASGLVQTGSLVEHTYKIRLPDP
EECCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCHHHHCEEEEECCCC
ADVPVIRAQAETRFPSAGWSIRTSGNAAPSLNANITRFSQFLTLVGLTALIVGGVGVANA
CCCCEEECCHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
VRSYLDGKRSVIATFKCLGAPASLVAMIYLSQILMIALVGIGIGIAIGAFIPFVAAQFLA
HHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLPVSTAFELYPSALGLAALFGLLTALTFAILPLGRARRVPATALFRQQGFEPTGFPPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCHH
AYLTGAFICLAALAGLAVWTAYDQYISLVFLGAIAFAFIVLRGVSLLISWLARRSPRVHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PALRLAIGNIHRPGALTPSVVLSLGLGLALLVTLALIDGNLRRELTGDMAERAPNFFFVD
CHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEE
IQSSEIEGFRSLLAGAMPEGKIIEVPMLRGRIVALNGEDVNSRNVPPGGQWVLRGDRGIT
ECCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCE
YARNRPENSKLTEGSWWPEDYGGEPLVSFSAEEARELGLKLGDTVTVNVLGRNITARISN
ECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCEEEEEEECCCHHHHHCC
FREVEWESLSINFVMVFSPNTFAGAPHAWLATIIDPDASAQEEAAVLKTVTNTYPTITSV
CHHCCEEEEEEEEEEEECCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCCCCEEEE
RVKDALDIVNTLLGQLATAVRAAAAVALVASILVLAGALAAGNRARIHDAVVLKTLGATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHH
ATLIRAFSYEYIILGLATAVFALFAGGVSAWFVVSRIMTLPSSFLPDVAIATIILALVVT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH
VGIGLAGTWRVLGQKAAPVLREL
HHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]