| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is tesB [H]
Identifier: 150398243
GI number: 150398243
Start: 3197678
End: 3198562
Strand: Direct
Name: tesB [H]
Synonym: Smed_3049
Alternate gene names: 150398243
Gene position: 3197678-3198562 (Clockwise)
Preceding gene: 150398241
Following gene: 150398244
Centisome position: 84.55
GC content: 63.95
Gene sequence:
>885_bases ATGTCGCGCCTCACCGAGACTGCCACGCCAATGGACGCGCTGCTTGCGATACTCGACCTCGAAAAGCTCGAAGAGAACCT CTTCAGGGGCTTAAGCCCGCAGGTCGGCTGGCAGCGGGTCTTCGGCGGCCAGGTGATCGGCCAGGCGCTGGTCGCCGCCC AGCGCACGGTCGAAGGAGGCCGTTACGTCCATTCACTGCACGCCTATTTCATGCGGCCGGGCGATCCGTCGGTCCCTATC GTCTACGAAGTTGACCGGATCCGCGACGGCTCGAGCTTCGCCACGCGGCGCGTGGCGGCGATCCAGCACGGCAAGGCCAT CTTCGCCATGTCGGCCTCCTTCCAATACGACGAGGATGGATTCGAACACCAGTTCGACATGCCGGACGTGCCTATGCCGG AGACGCTGCCGGGCGAGCAGGAACTCAAGGAGAAGTTCCTCGTCCACGCGCCGGAGGCGATCCGCCGTTATTGGGAGCGG CCGCGGCCGATCGAAATCCGCCCCGTCTCGCTCGAGCATTATTTCTCACGAGCCAAGGCATCGCCGAAGCAGGACGTCTG GGTGAAAGCGGTCGGCGCGGTGCCTGACGAGCGCCATCTGCAGGCCGCCGTCCTTGCCTATCTTTCCGACATGACGCTTC TCGACACATCGCTTTACGCGCACGGCACGTCGGTGTTCGACCGCAGCCTCCAGGTCGCGAGCCTCGACCACGCAATGTGG TTCCACCGGCCCTCGAAGATGGACGATTGGCTGCTCTACACCCAGGACAGCCCGAGTGCGCACGGCGCGCGCGGCATGAC CCGTGGCAGCCTTTTCGATCGCTCCGGCGTTCTGATTGCCTCTGTGGCGCAGGAAGGATTGATCCGCAAAAAGGCAACTG CATAA
Upstream 100 bases:
>100_bases TCAATACATCGATCATCCGCCTCGTCTCCCGCACTTGAGCATCATCTCGTGCCTATATAGATCAATGCCATCGCCGTTCC TACCATAGGAGACCGCCAAG
Downstream 100 bases:
>100_bases AATTAGTTCAATTTTTCGATTCTGCCCGAATAATAATCATTCCACGTGGCTTTTTTTTAGCTCCCTCGGGCAGATGCCGC TCCAATCAAATTTTTTCCAT
Product: acyl-CoA thioesterase II
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSRLTETATPMDALLAILDLEKLEENLFRGLSPQVGWQRVFGGQVIGQALVAAQRTVEGGRYVHSLHAYFMRPGDPSVPI VYEVDRIRDGSSFATRRVAAIQHGKAIFAMSASFQYDEDGFEHQFDMPDVPMPETLPGEQELKEKFLVHAPEAIRRYWER PRPIEIRPVSLEHYFSRAKASPKQDVWVKAVGAVPDERHLQAAVLAYLSDMTLLDTSLYAHGTSVFDRSLQVASLDHAMW FHRPSKMDDWLLYTQDSPSAHGARGMTRGSLFDRSGVLIASVAQEGLIRKKATA
Sequences:
>Translated_294_residues MSRLTETATPMDALLAILDLEKLEENLFRGLSPQVGWQRVFGGQVIGQALVAAQRTVEGGRYVHSLHAYFMRPGDPSVPI VYEVDRIRDGSSFATRRVAAIQHGKAIFAMSASFQYDEDGFEHQFDMPDVPMPETLPGEQELKEKFLVHAPEAIRRYWER PRPIEIRPVSLEHYFSRAKASPKQDVWVKAVGAVPDERHLQAAVLAYLSDMTLLDTSLYAHGTSVFDRSLQVASLDHAMW FHRPSKMDDWLLYTQDSPSAHGARGMTRGSLFDRSGVLIASVAQEGLIRKKATA >Mature_293_residues SRLTETATPMDALLAILDLEKLEENLFRGLSPQVGWQRVFGGQVIGQALVAAQRTVEGGRYVHSLHAYFMRPGDPSVPIV YEVDRIRDGSSFATRRVAAIQHGKAIFAMSASFQYDEDGFEHQFDMPDVPMPETLPGEQELKEKFLVHAPEAIRRYWERP RPIEIRPVSLEHYFSRAKASPKQDVWVKAVGAVPDERHLQAAVLAYLSDMTLLDTSLYAHGTSVFDRSLQVASLDHAMWF HRPSKMDDWLLYTQDSPSAHGARGMTRGSLFDRSGVLIASVAQEGLIRKKATA
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=284, Percent_Identity=43.6619718309859, Blast_Score=227, Evalue=1e-59, Organism=Escherichia coli, GI1786657, Length=270, Percent_Identity=47.4074074074074, Blast_Score=275, Evalue=3e-75, Organism=Caenorhabditis elegans, GI71988741, Length=294, Percent_Identity=36.734693877551, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17558508, Length=299, Percent_Identity=38.4615384615385, Blast_Score=181, Evalue=6e-46, Organism=Caenorhabditis elegans, GI115532456, Length=299, Percent_Identity=36.1204013377926, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17531885, Length=271, Percent_Identity=38.0073800738007, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17531889, Length=299, Percent_Identity=36.1204013377926, Blast_Score=165, Evalue=2e-41, Organism=Caenorhabditis elegans, GI212645202, Length=265, Percent_Identity=36.9811320754717, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71982224, Length=298, Percent_Identity=32.2147651006711, Blast_Score=128, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6322480, Length=337, Percent_Identity=27.0029673590504, Blast_Score=105, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 32993; Mature: 32862
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLTETATPMDALLAILDLEKLEENLFRGLSPQVGWQRVFGGQVIGQALVAAQRTVEGG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC RYVHSLHAYFMRPGDPSVPIVYEVDRIRDGSSFATRRVAAIQHGKAIFAMSASFQYDEDG HHHHHHHHHHCCCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC FEHQFDMPDVPMPETLPGEQELKEKFLVHAPEAIRRYWERPRPIEIRPVSLEHYFSRAKA CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECHHHHHHHHHCC SPKQDVWVKAVGAVPDERHLQAAVLAYLSDMTLLDTSLYAHGTSVFDRSLQVASLDHAMW CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHH FHRPSKMDDWLLYTQDSPSAHGARGMTRGSLFDRSGVLIASVAQEGLIRKKATA HCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCC >Mature Secondary Structure SRLTETATPMDALLAILDLEKLEENLFRGLSPQVGWQRVFGGQVIGQALVAAQRTVEGG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC RYVHSLHAYFMRPGDPSVPIVYEVDRIRDGSSFATRRVAAIQHGKAIFAMSASFQYDEDG HHHHHHHHHHCCCCCCCCCEEEEHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC FEHQFDMPDVPMPETLPGEQELKEKFLVHAPEAIRRYWERPRPIEIRPVSLEHYFSRAKA CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECHHHHHHHHHCC SPKQDVWVKAVGAVPDERHLQAAVLAYLSDMTLLDTSLYAHGTSVFDRSLQVASLDHAMW CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHH FHRPSKMDDWLLYTQDSPSAHGARGMTRGSLFDRSGVLIASVAQEGLIRKKATA HCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]