| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is mro [H]
Identifier: 150398226
GI number: 150398226
Start: 3179518
End: 3180534
Strand: Direct
Name: mro [H]
Synonym: Smed_3031
Alternate gene names: 150398226
Gene position: 3179518-3180534 (Clockwise)
Preceding gene: 150398225
Following gene: 150398237
Centisome position: 84.07
GC content: 61.95
Gene sequence:
>1017_bases ATGACGACCGACATGGAAATCTTCGGCCATCTGGCCTCAGGCGAGCCCGTCCACCGGGTGACCCTCAAGGGCGGCGGTCT GACGGCGTCGGTAATCACCTGGGGCTCGGTCATCCAGGATCTGCGGCTCGACGGACATGCGCCGCCGCTGGTGCTCGGCT TCGAGGATTTCCCAAGCTATCCAGCCCATTCCTCCTATTTCGGCGCCACGCCCGGCCGCAACGCCAACCGCATCGGCGAC GGCCGTTTCTCGCTCGACGGCAGGGCCTATCAGCTCGAACGCAACGAGAAGGGCGTCACGCATCTACATGGGGGCAGTGA CAATATCGCCAGGCGCAACTGGACGATCGTCGGACGGGACGAAGACAGTGTGACGCTCAAAATCACCGATCCGGACGGCC GTGCCGGCTATCCCGGCAATTGCACGATCACCTGCACATATCGGCTGAAGCCCGGCGGTACGCTCAACGTCGTCTACGAA ACCGAGACCGACGCGCCGACGCTCGCCAATGTCTGCCAGCACAGCTATTTCAACCTCGATGGCGGATCGGACGCGTTCGG CCACGATATCATGATCGCGGCGGACCACTTCCTGCCTACCGACGAGCGGCAGATTCCAACGGGAGAGATCCGCCCCGTCG ACGGCACCGCCTTCGACCTGCGCGAAATGACCTCGCTCAAGCGACAACTGGACGGCGACAGGATAGGCTACGATCACAAT TTCTGCCTCTCCCCGGAACGGATGCAGAAGCGATCCGTCGCGCTGGTACGCAGCATCAATTCGGGCGTGTCGCTGGAAGT TCTGACGACGGAGTCCGGCGTCCAGCTCTATACCGGAGAAAAACTCGACGTAGCCGTTCCCGGCCTCGAAGGCCGCCGCT ACGGCGCCTTTGCAGGCTTCTGTCTCGAAACACAGATCTGGCCCGATGCGGTCAATCACGAAGGTTTTCCTAACGCAATT CTGCGGCCGGGCGAAACGCTTCGGCAGGAGACGGACTACGTCTTCACCAGGAATTGA
Upstream 100 bases:
>100_bases GGAGCCGGAGCGTATTGAAGCGGAAAAGTATGACTTTATAGTTGCCGCACCGCCGGAAATGCCGCAGGTTGGCGCCCGAT TGCGGAAATGGGGAGACAAA
Downstream 100 bases:
>100_bases GGGCTGAGTAAGGGCAGGGACGAGCGCGCGCCCTGCCGCCAACTTTCGTTTTTGGCCGCTGACGAGGCCCGCATACGAGC TTCGGGGTTGACAAGCATCG
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTTDMEIFGHLASGEPVHRVTLKGGGLTASVITWGSVIQDLRLDGHAPPLVLGFEDFPSYPAHSSYFGATPGRNANRIGD GRFSLDGRAYQLERNEKGVTHLHGGSDNIARRNWTIVGRDEDSVTLKITDPDGRAGYPGNCTITCTYRLKPGGTLNVVYE TETDAPTLANVCQHSYFNLDGGSDAFGHDIMIAADHFLPTDERQIPTGEIRPVDGTAFDLREMTSLKRQLDGDRIGYDHN FCLSPERMQKRSVALVRSINSGVSLEVLTTESGVQLYTGEKLDVAVPGLEGRRYGAFAGFCLETQIWPDAVNHEGFPNAI LRPGETLRQETDYVFTRN
Sequences:
>Translated_338_residues MTTDMEIFGHLASGEPVHRVTLKGGGLTASVITWGSVIQDLRLDGHAPPLVLGFEDFPSYPAHSSYFGATPGRNANRIGD GRFSLDGRAYQLERNEKGVTHLHGGSDNIARRNWTIVGRDEDSVTLKITDPDGRAGYPGNCTITCTYRLKPGGTLNVVYE TETDAPTLANVCQHSYFNLDGGSDAFGHDIMIAADHFLPTDERQIPTGEIRPVDGTAFDLREMTSLKRQLDGDRIGYDHN FCLSPERMQKRSVALVRSINSGVSLEVLTTESGVQLYTGEKLDVAVPGLEGRRYGAFAGFCLETQIWPDAVNHEGFPNAI LRPGETLRQETDYVFTRN >Mature_337_residues TTDMEIFGHLASGEPVHRVTLKGGGLTASVITWGSVIQDLRLDGHAPPLVLGFEDFPSYPAHSSYFGATPGRNANRIGDG RFSLDGRAYQLERNEKGVTHLHGGSDNIARRNWTIVGRDEDSVTLKITDPDGRAGYPGNCTITCTYRLKPGGTLNVVYET ETDAPTLANVCQHSYFNLDGGSDAFGHDIMIAADHFLPTDERQIPTGEIRPVDGTAFDLREMTSLKRQLDGDRIGYDHNF CLSPERMQKRSVALVRSINSGVSLEVLTTESGVQLYTGEKLDVAVPGLEGRRYGAFAGFCLETQIWPDAVNHEGFPNAIL RPGETLRQETDYVFTRN
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=337, Percent_Identity=42.433234421365, Blast_Score=231, Evalue=1e-60, Organism=Escherichia coli, GI1786971, Length=334, Percent_Identity=33.5329341317365, Blast_Score=188, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17557428, Length=319, Percent_Identity=30.4075235109718, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI115533334, Length=319, Percent_Identity=30.4075235109718, Blast_Score=149, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6319493, Length=330, Percent_Identity=29.6969696969697, Blast_Score=109, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6322004, Length=333, Percent_Identity=30.6306306306306, Blast_Score=94, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6324399, Length=334, Percent_Identity=26.6467065868263, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI24659048, Length=343, Percent_Identity=39.067055393586, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24668278, Length=355, Percent_Identity=36.6197183098592, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24583720, Length=341, Percent_Identity=35.4838709677419, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24668282, Length=330, Percent_Identity=35.1515151515151, Blast_Score=185, Evalue=4e-47, Organism=Drosophila melanogaster, GI24641876, Length=330, Percent_Identity=29.0909090909091, Blast_Score=128, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 37106; Mature: 36975
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDMEIFGHLASGEPVHRVTLKGGGLTASVITWGSVIQDLRLDGHAPPLVLGFEDFPSY CCCCHHHHEEECCCCCEEEEEEECCCEEEEEHHHHHHHHHHHCCCCCCCEEEEHHHCCCC PAHSSYFGATPGRNANRIGDGRFSLDGRAYQLERNEKGVTHLHGGSDNIARRNWTIVGRD CCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCEEEECCCCCCEECCCEEEECC EDSVTLKITDPDGRAGYPGNCTITCTYRLKPGGTLNVVYETETDAPTLANVCQHSYFNLD CCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCEEECC GGSDAFGHDIMIAADHFLPTDERQIPTGEIRPVDGTAFDLREMTSLKRQLDGDRIGYDHN CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC FCLSPERMQKRSVALVRSINSGVSLEVLTTESGVQLYTGEKLDVAVPGLEGRRYGAFAGF EECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEEECCCCCCCCCCCEEEE CLETQIWPDAVNHEGFPNAILRPGETLRQETDYVFTRN EEECCCCCCCCCCCCCCCHHCCCCHHHHHCCCEEEECC >Mature Secondary Structure TTDMEIFGHLASGEPVHRVTLKGGGLTASVITWGSVIQDLRLDGHAPPLVLGFEDFPSY CCCHHHHEEECCCCCEEEEEEECCCEEEEEHHHHHHHHHHHCCCCCCCEEEEHHHCCCC PAHSSYFGATPGRNANRIGDGRFSLDGRAYQLERNEKGVTHLHGGSDNIARRNWTIVGRD CCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCEEEECCCCCCEECCCEEEECC EDSVTLKITDPDGRAGYPGNCTITCTYRLKPGGTLNVVYETETDAPTLANVCQHSYFNLD CCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCEEECC GGSDAFGHDIMIAADHFLPTDERQIPTGEIRPVDGTAFDLREMTSLKRQLDGDRIGYDHN CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC FCLSPERMQKRSVALVRSINSGVSLEVLTTESGVQLYTGEKLDVAVPGLEGRRYGAFAGF EECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEEECCCCCCCCCCCEEEE CLETQIWPDAVNHEGFPNAILRPGETLRQETDYVFTRN EEECCCCCCCCCCCCCCCHHCCCCHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3012466; 3531172 [H]