Click here to switch to the map view.

The map label for this gene is 150398220

Identifier: 150398220

GI number: 150398220

Start: 3175633

End: 3175839

Strand: Reverse

Name: 150398220

Synonym: Smed_3025

Alternate gene names: NA

Gene position: 3175839-3175633 (Counterclockwise)

Preceding gene: 150398221

Following gene: 150398218

Centisome position: 83.97

GC content: 57.97

Gene sequence:

>207_bases
TTGAAACTCTACCGCTTTCTAACCGGCCCCGACGATGCCTCCTTCTGTCACAAGGTGACGGCGGCATTGAACCAGGGGTG
GACGCTGCATGGCCCGACGACCTACGCCTTCAATGCCGACACCCAGCATATGCAATGCGGCCAGGCGGTGGTGAAGGACG
TGGAGGGCAAGGATTACCATCCGGATATGAAACTGTCGGAACAGTAG

Upstream 100 bases:

>100_bases
TCATCAATCTTCATGGCCGCATGGTCGAGCGCCTCCACCTCGAGCAGGCGATGAAAATCGCCGCCAAGGCGGAGATCATC
GAAAAGCGAAAGGCAAGATC

Downstream 100 bases:

>100_bases
GGATCGTTTTCGGGTGAGTTTACGCCTCAAGCGGGTAAAGAGGTGTGAGCGCCTGAGCGCACTAGACTAAGACTATTAAG
GTATTGGAGACTGAAGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MKLYRFLTGPDDASFCHKVTAALNQGWTLHGPTTYAFNADTQHMQCGQAVVKDVEGKDYHPDMKLSEQ

Sequences:

>Translated_68_residues
MKLYRFLTGPDDASFCHKVTAALNQGWTLHGPTTYAFNADTQHMQCGQAVVKDVEGKDYHPDMKLSEQ
>Mature_68_residues
MKLYRFLTGPDDASFCHKVTAALNQGWTLHGPTTYAFNADTQHMQCGQAVVKDVEGKDYHPDMKLSEQ

Specific function: Unknown

COG id: COG5515

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7645; Mature: 7645

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLYRFLTGPDDASFCHKVTAALNQGWTLHGPTTYAFNADTQHMQCGQAVVKDVEGKDYH
CCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC
PDMKLSEQ
CCCCCCCC
>Mature Secondary Structure
MKLYRFLTGPDDASFCHKVTAALNQGWTLHGPTTYAFNADTQHMQCGQAVVKDVEGKDYH
CCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC
PDMKLSEQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA