Click here to switch to the map view.

The map label for this gene is 150398192

Identifier: 150398192

GI number: 150398192

Start: 3144485

End: 3146857

Strand: Reverse

Name: 150398192

Synonym: Smed_2995

Alternate gene names: NA

Gene position: 3146857-3144485 (Counterclockwise)

Preceding gene: 150398193

Following gene: 150398191

Centisome position: 83.21

GC content: 60.39

Gene sequence:

>2373_bases
ATGGACGCCTACTGGCGGGCTTCCAACTATCTCTCGGTCGGCCAGATATACCTGCTCGACAATCCGCTATTGCGGGAATC
CCTGAAGCGCGAGCACATCAAGCCGCGACTGCTCGGCCACTGGGGGACGTCGCCCGGTCTCAACATGCTCTATGTGCATC
TGAACCGGGTCATCAAGCGCGACGATCTCAACATGATCTACGTCATCGGCCCCGGCCACGGCGGACCGTCATTGGTGGCG
CACGCTTATCTCGAAGGCACCTACAGCGAGTTCTATCCGAATATCAGCGAGGATACGGAAGGGATGAAGCGACTGTTCAA
GCAGTTCAGCTTCCCCGGCGGCATACCGAGCCATGTCGCGCCCGAAACTCCCGGCAGCATCCACGAGGGCGGCGAACTCG
GATACGCGCTCAGCCATGCCTATGGCGCGGCATTCGACAATCCCGATCTGATCGTCGCCTGCGTCGTTGGCGATGGGGAA
GCTGAGACCGGTCCGCTCGCGACCGGCTGGCAAAGCAACAAATTCCTCAATCCCGCCCGCGACGGCTGTGTGCTGCCGAT
CCTTCACCTGAACGGCTATAAGATTGCCAACCCCTGCTTCCTCGCCCGCATCCCCGAGGAGGAACTGCGCAAGTTCTTCG
AGGGGATGGGATACAGGCCCTATTTCGTCGAGGGCCGTGATCCCGAGGATGTTCACCAGAAGCTCGCAGGCGTGCTCGAC
ACCGCGGTCGGCGAGATCAAGGAAATCTGGGCCGATGCCCGTACGAACGGCAATCTCAAGCGCCCGGCATGGCCGATGAT
CGTCTTTCGGACGCCAAAGGGCTGGACGTGCCCGCCGGAGATCGATGGCAAGAAATGCGAGGACTATTGGCGATCGCATC
AGGTGCCCATGGGCGAGATGGACAAGCCGGAGCATATCCGCATTCTCGAACAATGGATGAAAAGCTATCGGCCCGAGGAG
CTTTTCGACGAGACCGGCCGGCTCACGGCTGAAATTGCATCGCTCGCTCCGGCGGGCCACCGCCGGATGAGCGACAACCC
CCACGCCAACGGCGGGTTGCTTCTGCGTGATTTGAAGATGCCTGATTTCAGGGAATACGCCGTGGAGGTAACCAGCCCTG
GCGCGACTATGGCCGAGTCAGCCCGCGCGATGGGCAAGTTCCTGCGCGACGTGATGAAGGCAAACCTGGAGAGCAAGAAC
TTCCGGCTGTTCAGTCCGGACGAGAACAACTCCAACCGCTGGCAGGATGTGCTCGAGGTGACCGATCGCTGCTACATGGC
GGATATCTATCCGGAGGACGACCATCTCTCGCCGGACGGCCGCATCATGGAAGTATTGAGCGAGCACCAGTGCCAGGGAT
GGCTGGAGGGCTATCTGCTGACAGGCCGCCACGGCTTCTTCTCCTGCTACGAAGCCTTCATCCACATCATCGACTCGATG
TTCAACCAGCATGCCAAGTGGCTCAAGGTGTGTGGCGAAATCCCGTGGCGCAGACCCATCGGCTCACTGAACTATTTCCT
CAGTTCGCATGTCTGGCGACAGGATCACAACGGCTTCAGCCATCAGGACCCCGGCTTCATCGACCATGTCGTCAATAAAA
AGGCGGACGTGATCCGCGTCTATCTGCCGCCGGACGCCAACACCCTGCTCTGCGTCACGGACCACTGCCTGCGCAGCCGC
GACTATGTCAACGTGGTCGTCGCCGGAAAACAGCCTGCGCCGCAATGGCTGACGATGAGCGAGGCCGTCAGGCACTGCGC
CATGGGCCTCAGCATCTGGGATTGGGCGAGCAGCGACAAGGGCAGCGAGCCCGATGTCGTCATGGCCTGTTGCGGCGACG
TCCCGACCCTCGAAACGCTTGCGGCGGTGCAACTGCTCCGCGAACACCTGCCCGAGCTGAAGGTGCGGGTTGTCAATGTC
GTCAACCTGATGAAGCTGCAACCTGCGGAGGAGCATCCGCACGGGCTATCGGACCGTGATTTCGACGCCTTCTTCACAAG
AGACAAGCCGATCATCTTCGCCTTCCACGGTTATCCGTGGCTGATCCACCGATTTACCTATCGCAGAAAAAATCACGGCA
ACCTGCACGTGCGCGGCTACAAGGAGGAAGGCACGACGACCACCCCGTTCGACATGGTGGTCCTGAACGAGCTCGACCGG
TTCCACCTCGTCGAGGACGTTATCGATCGGCTGCCGCAACTCGGCGCCCGTGCCGCCTATTTCAAGCAGGCAATTCACGA
GAAGCTGATCGAGCATCGCGAATATATCGAGAAGCATGGCGACGACATGCTTGCGATCAGCGGCTGGAAGTGGGGCGTGA
AAGACACGACGGCAGCGTCCCGGAAAACCTCTACGGAAGGGGACAACGTCTGA

Upstream 100 bases:

>100_bases
GGAGGTGCAGATGACTTCGCTTGAAACGGCAGCGATGAACGAGACGACATCAGGCAAGTCACCTGCAGCAGCCGTGCTGT
CATCCGCGGAACTCCGCTTG

Downstream 100 bases:

>100_bases
GCCGGGAGGGCTGGACGTGAACGTATTCGTGATCAGGCATGGGGAGACCGAGTGGAGTCTGAGCGGGCAACACACGGGCA
CAACAGACATCCCCTTGACC

Product: putative phosphoketolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 790; Mature: 790

Protein sequence:

>790_residues
MDAYWRASNYLSVGQIYLLDNPLLRESLKREHIKPRLLGHWGTSPGLNMLYVHLNRVIKRDDLNMIYVIGPGHGGPSLVA
HAYLEGTYSEFYPNISEDTEGMKRLFKQFSFPGGIPSHVAPETPGSIHEGGELGYALSHAYGAAFDNPDLIVACVVGDGE
AETGPLATGWQSNKFLNPARDGCVLPILHLNGYKIANPCFLARIPEEELRKFFEGMGYRPYFVEGRDPEDVHQKLAGVLD
TAVGEIKEIWADARTNGNLKRPAWPMIVFRTPKGWTCPPEIDGKKCEDYWRSHQVPMGEMDKPEHIRILEQWMKSYRPEE
LFDETGRLTAEIASLAPAGHRRMSDNPHANGGLLLRDLKMPDFREYAVEVTSPGATMAESARAMGKFLRDVMKANLESKN
FRLFSPDENNSNRWQDVLEVTDRCYMADIYPEDDHLSPDGRIMEVLSEHQCQGWLEGYLLTGRHGFFSCYEAFIHIIDSM
FNQHAKWLKVCGEIPWRRPIGSLNYFLSSHVWRQDHNGFSHQDPGFIDHVVNKKADVIRVYLPPDANTLLCVTDHCLRSR
DYVNVVVAGKQPAPQWLTMSEAVRHCAMGLSIWDWASSDKGSEPDVVMACCGDVPTLETLAAVQLLREHLPELKVRVVNV
VNLMKLQPAEEHPHGLSDRDFDAFFTRDKPIIFAFHGYPWLIHRFTYRRKNHGNLHVRGYKEEGTTTTPFDMVVLNELDR
FHLVEDVIDRLPQLGARAAYFKQAIHEKLIEHREYIEKHGDDMLAISGWKWGVKDTTAASRKTSTEGDNV

Sequences:

>Translated_790_residues
MDAYWRASNYLSVGQIYLLDNPLLRESLKREHIKPRLLGHWGTSPGLNMLYVHLNRVIKRDDLNMIYVIGPGHGGPSLVA
HAYLEGTYSEFYPNISEDTEGMKRLFKQFSFPGGIPSHVAPETPGSIHEGGELGYALSHAYGAAFDNPDLIVACVVGDGE
AETGPLATGWQSNKFLNPARDGCVLPILHLNGYKIANPCFLARIPEEELRKFFEGMGYRPYFVEGRDPEDVHQKLAGVLD
TAVGEIKEIWADARTNGNLKRPAWPMIVFRTPKGWTCPPEIDGKKCEDYWRSHQVPMGEMDKPEHIRILEQWMKSYRPEE
LFDETGRLTAEIASLAPAGHRRMSDNPHANGGLLLRDLKMPDFREYAVEVTSPGATMAESARAMGKFLRDVMKANLESKN
FRLFSPDENNSNRWQDVLEVTDRCYMADIYPEDDHLSPDGRIMEVLSEHQCQGWLEGYLLTGRHGFFSCYEAFIHIIDSM
FNQHAKWLKVCGEIPWRRPIGSLNYFLSSHVWRQDHNGFSHQDPGFIDHVVNKKADVIRVYLPPDANTLLCVTDHCLRSR
DYVNVVVAGKQPAPQWLTMSEAVRHCAMGLSIWDWASSDKGSEPDVVMACCGDVPTLETLAAVQLLREHLPELKVRVVNV
VNLMKLQPAEEHPHGLSDRDFDAFFTRDKPIIFAFHGYPWLIHRFTYRRKNHGNLHVRGYKEEGTTTTPFDMVVLNELDR
FHLVEDVIDRLPQLGARAAYFKQAIHEKLIEHREYIEKHGDDMLAISGWKWGVKDTTAASRKTSTEGDNV
>Mature_790_residues
MDAYWRASNYLSVGQIYLLDNPLLRESLKREHIKPRLLGHWGTSPGLNMLYVHLNRVIKRDDLNMIYVIGPGHGGPSLVA
HAYLEGTYSEFYPNISEDTEGMKRLFKQFSFPGGIPSHVAPETPGSIHEGGELGYALSHAYGAAFDNPDLIVACVVGDGE
AETGPLATGWQSNKFLNPARDGCVLPILHLNGYKIANPCFLARIPEEELRKFFEGMGYRPYFVEGRDPEDVHQKLAGVLD
TAVGEIKEIWADARTNGNLKRPAWPMIVFRTPKGWTCPPEIDGKKCEDYWRSHQVPMGEMDKPEHIRILEQWMKSYRPEE
LFDETGRLTAEIASLAPAGHRRMSDNPHANGGLLLRDLKMPDFREYAVEVTSPGATMAESARAMGKFLRDVMKANLESKN
FRLFSPDENNSNRWQDVLEVTDRCYMADIYPEDDHLSPDGRIMEVLSEHQCQGWLEGYLLTGRHGFFSCYEAFIHIIDSM
FNQHAKWLKVCGEIPWRRPIGSLNYFLSSHVWRQDHNGFSHQDPGFIDHVVNKKADVIRVYLPPDANTLLCVTDHCLRSR
DYVNVVVAGKQPAPQWLTMSEAVRHCAMGLSIWDWASSDKGSEPDVVMACCGDVPTLETLAAVQLLREHLPELKVRVVNV
VNLMKLQPAEEHPHGLSDRDFDAFFTRDKPIIFAFHGYPWLIHRFTYRRKNHGNLHVRGYKEEGTTTTPFDMVVLNELDR
FHLVEDVIDRLPQLGARAAYFKQAIHEKLIEHREYIEKHGDDMLAISGWKWGVKDTTAASRKTSTEGDNV

Specific function: Unknown

COG id: COG3957

COG function: function code G; Phosphoketolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the XFP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009014
- InterPro:   IPR005593
- InterPro:   IPR018969
- InterPro:   IPR019790
- InterPro:   IPR018970
- InterPro:   IPR019789 [H]

Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]

EC number: NA

Molecular weight: Translated: 89857; Mature: 89857

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS60002 PHOSPHOKETOLASE_1 ; PS60003 PHOSPHOKETOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAYWRASNYLSVGQIYLLDNPLLRESLKREHIKPRLLGHWGTSPGLNMLYVHLNRVIKR
CCCCCCCCCCEEECEEEEECCHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH
DDLNMIYVIGPGHGGPSLVAHAYLEGTYSEFYPNISEDTEGMKRLFKQFSFPGGIPSHVA
CCCCEEEEEECCCCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PETPGSIHEGGELGYALSHAYGAAFDNPDLIVACVVGDGEAETGPLATGWQSNKFLNPAR
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
DGCVLPILHLNGYKIANPCFLARIPEEELRKFFEGMGYRPYFVEGRDPEDVHQKLAGVLD
CCCEEEEEEECCEEECCCEEEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHH
TAVGEIKEIWADARTNGNLKRPAWPMIVFRTPKGWTCPPEIDGKKCEDYWRSHQVPMGEM
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
DKPEHIRILEQWMKSYRPEELFDETGRLTAEIASLAPAGHRRMSDNPHANGGLLLRDLKM
CCCHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC
PDFREYAVEVTSPGATMAESARAMGKFLRDVMKANLESKNFRLFSPDENNSNRWQDVLEV
CCHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHH
TDRCYMADIYPEDDHLSPDGRIMEVLSEHQCQGWLEGYLLTGRHGFFSCYEAFIHIIDSM
HHCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHH
FNQHAKWLKVCGEIPWRRPIGSLNYFLSSHVWRQDHNGFSHQDPGFIDHVVNKKADVIRV
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEE
YLPPDANTLLCVTDHCLRSRDYVNVVVAGKQPAPQWLTMSEAVRHCAMGLSIWDWASSDK
EECCCCCEEEEEEHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCC
GSEPDVVMACCGDVPTLETLAAVQLLREHLPELKVRVVNVVNLMKLQPAEEHPHGLSDRD
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FDAFFTRDKPIIFAFHGYPWLIHRFTYRRKNHGNLHVRGYKEEGTTTTPFDMVVLNELDR
CHHHEECCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
FHLVEDVIDRLPQLGARAAYFKQAIHEKLIEHREYIEKHGDDMLAISGWKWGVKDTTAAS
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
RKTSTEGDNV
CCCCCCCCCC
>Mature Secondary Structure
MDAYWRASNYLSVGQIYLLDNPLLRESLKREHIKPRLLGHWGTSPGLNMLYVHLNRVIKR
CCCCCCCCCCEEECEEEEECCHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHH
DDLNMIYVIGPGHGGPSLVAHAYLEGTYSEFYPNISEDTEGMKRLFKQFSFPGGIPSHVA
CCCCEEEEEECCCCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PETPGSIHEGGELGYALSHAYGAAFDNPDLIVACVVGDGEAETGPLATGWQSNKFLNPAR
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
DGCVLPILHLNGYKIANPCFLARIPEEELRKFFEGMGYRPYFVEGRDPEDVHQKLAGVLD
CCCEEEEEEECCEEECCCEEEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHH
TAVGEIKEIWADARTNGNLKRPAWPMIVFRTPKGWTCPPEIDGKKCEDYWRSHQVPMGEM
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
DKPEHIRILEQWMKSYRPEELFDETGRLTAEIASLAPAGHRRMSDNPHANGGLLLRDLKM
CCCHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC
PDFREYAVEVTSPGATMAESARAMGKFLRDVMKANLESKNFRLFSPDENNSNRWQDVLEV
CCHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHH
TDRCYMADIYPEDDHLSPDGRIMEVLSEHQCQGWLEGYLLTGRHGFFSCYEAFIHIIDSM
HHCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHH
FNQHAKWLKVCGEIPWRRPIGSLNYFLSSHVWRQDHNGFSHQDPGFIDHVVNKKADVIRV
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEE
YLPPDANTLLCVTDHCLRSRDYVNVVVAGKQPAPQWLTMSEAVRHCAMGLSIWDWASSDK
EECCCCCEEEEEEHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCC
GSEPDVVMACCGDVPTLETLAAVQLLREHLPELKVRVVNVVNLMKLQPAEEHPHGLSDRD
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FDAFFTRDKPIIFAFHGYPWLIHRFTYRRKNHGNLHVRGYKEEGTTTTPFDMVVLNELDR
CHHHEECCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
FHLVEDVIDRLPQLGARAAYFKQAIHEKLIEHREYIEKHGDDMLAISGWKWGVKDTTAAS
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
RKTSTEGDNV
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]