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The map label for this gene is phoD [H]

Identifier: 150398174

GI number: 150398174

Start: 3124575

End: 3126137

Strand: Reverse

Name: phoD [H]

Synonym: Smed_2977

Alternate gene names: 150398174

Gene position: 3126137-3124575 (Counterclockwise)

Preceding gene: 150398175

Following gene: 150398173

Centisome position: 82.66

GC content: 63.98

Gene sequence:

>1563_bases
TTGGCCGCACTTCTGCGCACGCTGACCAGGCGTTCTTTCCTCTTCTCGGCCGGCGCCGCTGGTCTCGTCGCGTCTTCGGG
ACTTGCAACGCCGTTCTATGCTCGCGGGTATGGGCGGCCGGAATTTGCCCATGGGGTGCAGTCCGGCGATGTCGATACGC
GATCCGGCATGATCTGGACGCGCGTCGATCGGCCGGCGCGCGTTTCCGTCGAATATTCGACCACAGAGAGCTTTTCGAAC
GCCGTAAGGCTTGCCGATATCGATGCGACCCCGCAGACAGATTGCGCCGTCAAGTGCCGGCTCGACGACCTGCTGCCGGA
CCAGGATGTCTTCTACCGCTTTACCGCGACGGATCTTTATGATGCCAACCGCGTCTCGGACCCGGTCGTCGGGCGCTTTC
GCACCGCACCCTTGCGCCGACGCTCGGTGCGCTTCGTATGGTCCGGCGATACGGCGGGGCAGGGCTGGGGCATCGACGAG
GTCGGCATGAAGACCTATTCGACGATGCGGCTGCATGAGCCGGACTTCTTCATCCATTCCGGCGACACGATCTATGCCGA
CAACCCGATCCCCGACGAGATCAAGCTCCGCGACGGCGGCATGTGGAAGAACCGTATCGTCACGCCCGAGAAGCGCGACG
TTGCGCGCACGCTCGAGGAATATCGGGGCCAGTGGAAATATAACCTTCTCGACGAGCACGTGCGCGGGCTCAATGCCGAA
TGTCCTACCTTTTATCAGTGGGACGACCATGAGGTGCTGAACAATTGGTCGGCGTCGACGGATCTCAGCGATGATGCGCG
CTATCCCGAGAAAGACGTCGCCGTCTACGCCGCCCGCGCCGCTCGCGCATTCCACGAGATGACGCCGATCCGCACGGTGC
CGACGCAGCCGGGGCGTATTTTCCGCAAGGTCGCTTACGGCCCGCTGCTGGACGTCTTCTTCGTGGACCTGCGCTCCTAT
CGCGGCCCCAATCAGGGAGATGGCGGTGGCGGCCTTTTCGGCTGGCGGCAGATGGACTGGCTGAAGCGCGAGCTCGCGGC
ATCCAGCGCTACCTGGAAGGTGATAGCCTGCGATATGCCGGTCGGCCTCGTCGTCTGGGACGACTACTCGGCCAGGCGCG
GATCGGATGCGATCGCCGATGGCGGCAGCGGCGCGCCGAAAGGGCGCGAGACGGAATTTGCCGACCTCCTGCGCTTCATC
CGCGACAATGCGGTCGACAACATCGTCTGGCTCACGGCCGACGTGCATTATACCGCAGCGCATCACTACGATCCGTCGCG
CGCCGCCTTCAAGGATTTCCTGCCCTTCTGGGAGTTCGTCTCCGGCCCGCTTCATTCCGGCACCTACGGCCCGAAAGAAC
TCGACATGACCTTCGGCCCCGAGGTCCGCTTCATCAAGGCTTCGGGCGGAGGCGTCGACAGCAACCTGCCGCCCTCCGCA
GGCCTGCAGTTCTTCGGCGTCGTCGATATCAGCGGTCAGACGCAGCAGATGACGGTGCGGCTGATGGACCGGCAGGATCA
GGAACTCTGGCGTGTGACGCTGGACCCGGCAGCGGCCGCATGA

Upstream 100 bases:

>100_bases
TTGAAATAGTTTCATCCGTCTGTAACGTCACTGACATCCGGCTCGCCGATGGTCCGCTCGCGAAAGCTCTACATTCGCGA
AACGGAACCGGAGGCAGGTC

Downstream 100 bases:

>100_bases
GCATTGCAGGCGTAAACGCAGGCCTGCTCTGCGCGGCGGCCCCTTTCGCTTTCGTGAAAAAACCTGTATGAGCGCGGCAA
CTGAAAAGCGGTACCCGCCT

Product: alkaline phosphatase

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MAALLRTLTRRSFLFSAGAAGLVASSGLATPFYARGYGRPEFAHGVQSGDVDTRSGMIWTRVDRPARVSVEYSTTESFSN
AVRLADIDATPQTDCAVKCRLDDLLPDQDVFYRFTATDLYDANRVSDPVVGRFRTAPLRRRSVRFVWSGDTAGQGWGIDE
VGMKTYSTMRLHEPDFFIHSGDTIYADNPIPDEIKLRDGGMWKNRIVTPEKRDVARTLEEYRGQWKYNLLDEHVRGLNAE
CPTFYQWDDHEVLNNWSASTDLSDDARYPEKDVAVYAARAARAFHEMTPIRTVPTQPGRIFRKVAYGPLLDVFFVDLRSY
RGPNQGDGGGGLFGWRQMDWLKRELAASSATWKVIACDMPVGLVVWDDYSARRGSDAIADGGSGAPKGRETEFADLLRFI
RDNAVDNIVWLTADVHYTAAHHYDPSRAAFKDFLPFWEFVSGPLHSGTYGPKELDMTFGPEVRFIKASGGGVDSNLPPSA
GLQFFGVVDISGQTQQMTVRLMDRQDQELWRVTLDPAAAA

Sequences:

>Translated_520_residues
MAALLRTLTRRSFLFSAGAAGLVASSGLATPFYARGYGRPEFAHGVQSGDVDTRSGMIWTRVDRPARVSVEYSTTESFSN
AVRLADIDATPQTDCAVKCRLDDLLPDQDVFYRFTATDLYDANRVSDPVVGRFRTAPLRRRSVRFVWSGDTAGQGWGIDE
VGMKTYSTMRLHEPDFFIHSGDTIYADNPIPDEIKLRDGGMWKNRIVTPEKRDVARTLEEYRGQWKYNLLDEHVRGLNAE
CPTFYQWDDHEVLNNWSASTDLSDDARYPEKDVAVYAARAARAFHEMTPIRTVPTQPGRIFRKVAYGPLLDVFFVDLRSY
RGPNQGDGGGGLFGWRQMDWLKRELAASSATWKVIACDMPVGLVVWDDYSARRGSDAIADGGSGAPKGRETEFADLLRFI
RDNAVDNIVWLTADVHYTAAHHYDPSRAAFKDFLPFWEFVSGPLHSGTYGPKELDMTFGPEVRFIKASGGGVDSNLPPSA
GLQFFGVVDISGQTQQMTVRLMDRQDQELWRVTLDPAAAA
>Mature_519_residues
AALLRTLTRRSFLFSAGAAGLVASSGLATPFYARGYGRPEFAHGVQSGDVDTRSGMIWTRVDRPARVSVEYSTTESFSNA
VRLADIDATPQTDCAVKCRLDDLLPDQDVFYRFTATDLYDANRVSDPVVGRFRTAPLRRRSVRFVWSGDTAGQGWGIDEV
GMKTYSTMRLHEPDFFIHSGDTIYADNPIPDEIKLRDGGMWKNRIVTPEKRDVARTLEEYRGQWKYNLLDEHVRGLNAEC
PTFYQWDDHEVLNNWSASTDLSDDARYPEKDVAVYAARAARAFHEMTPIRTVPTQPGRIFRKVAYGPLLDVFFVDLRSYR
GPNQGDGGGGLFGWRQMDWLKRELAASSATWKVIACDMPVGLVVWDDYSARRGSDAIADGGSGAPKGRETEFADLLRFIR
DNAVDNIVWLTADVHYTAAHHYDPSRAAFKDFLPFWEFVSGPLHSGTYGPKELDMTFGPEVRFIKASGGGVDSNLPPSAG
LQFFGVVDISGQTQQMTVRLMDRQDQELWRVTLDPAAAA

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 58151; Mature: 58019

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALLRTLTRRSFLFSAGAAGLVASSGLATPFYARGYGRPEFAHGVQSGDVDTRSGMIWT
CHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCEEEE
RVDRPARVSVEYSTTESFSNAVRLADIDATPQTDCAVKCRLDDLLPDQDVFYRFTATDLY
ECCCCEEEEEEECCHHHHHCCEEEEECCCCCCCCCEEEEEHHHCCCCCCCEEEEEECCCC
DANRVSDPVVGRFRTAPLRRRSVRFVWSGDTAGQGWGIDEVGMKTYSTMRLHEPDFFIHS
CCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCHHHHEEEECCCCEEEEC
GDTIYADNPIPDEIKLRDGGMWKNRIVTPEKRDVARTLEEYRGQWKYNLLDEHVRGLNAE
CCEEEECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEECHHHHHHHCCCCC
CPTFYQWDDHEVLNNWSASTDLSDDARYPEKDVAVYAARAARAFHEMTPIRTVPTQPGRI
CCEEEECCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
FRKVAYGPLLDVFFVDLRSYRGPNQGDGGGGLFGWRQMDWLKRELAASSATWKVIACDMP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
VGLVVWDDYSARRGSDAIADGGSGAPKGRETEFADLLRFIRDNAVDNIVWLTADVHYTAA
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEE
HHYDPSRAAFKDFLPFWEFVSGPLHSGTYGPKELDMTFGPEVRFIKASGGGVDSNLPPSA
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECEECCCCEEEEEECCCCCCCCCCCCC
GLQFFGVVDISGQTQQMTVRLMDRQDQELWRVTLDPAAAA
CCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
AALLRTLTRRSFLFSAGAAGLVASSGLATPFYARGYGRPEFAHGVQSGDVDTRSGMIWT
HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHCCCCCCHHHCCCCCCCCCCCCCEEEE
RVDRPARVSVEYSTTESFSNAVRLADIDATPQTDCAVKCRLDDLLPDQDVFYRFTATDLY
ECCCCEEEEEEECCHHHHHCCEEEEECCCCCCCCCEEEEEHHHCCCCCCCEEEEEECCCC
DANRVSDPVVGRFRTAPLRRRSVRFVWSGDTAGQGWGIDEVGMKTYSTMRLHEPDFFIHS
CCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCHHHHEEEECCCCEEEEC
GDTIYADNPIPDEIKLRDGGMWKNRIVTPEKRDVARTLEEYRGQWKYNLLDEHVRGLNAE
CCEEEECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEECHHHHHHHCCCCC
CPTFYQWDDHEVLNNWSASTDLSDDARYPEKDVAVYAARAARAFHEMTPIRTVPTQPGRI
CCEEEECCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
FRKVAYGPLLDVFFVDLRSYRGPNQGDGGGGLFGWRQMDWLKRELAASSATWKVIACDMP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
VGLVVWDDYSARRGSDAIADGGSGAPKGRETEFADLLRFIRDNAVDNIVWLTADVHYTAA
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEE
HHYDPSRAAFKDFLPFWEFVSGPLHSGTYGPKELDMTFGPEVRFIKASGGGVDSNLPPSA
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECEECCCCEEEEEECCCCCCCCCCCCC
GLQFFGVVDISGQTQQMTVRLMDRQDQELWRVTLDPAAAA
CCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]