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The map label for this gene is yurN [H]

Identifier: 150398146

GI number: 150398146

Start: 3097591

End: 3098499

Strand: Reverse

Name: yurN [H]

Synonym: Smed_2949

Alternate gene names: 150398146

Gene position: 3098499-3097591 (Counterclockwise)

Preceding gene: 150398147

Following gene: 150398145

Centisome position: 81.93

GC content: 61.72

Gene sequence:

>909_bases
GTGCCCCCGACGGCAAGCCGCAAGACTGTGCGCTACAAGAGCCCGACCGTGCGCGGACGCCTGCCGGTGCTCATCCTCTT
CCTGCCGCCGGCTCTGCTGCTCTTCACCGTCTTCGTGATTCTGCCGATGGGCGAGGCGGCCTGGTACAGCCTCTATCGCT
GGAACGGTTACGGAACACCGACACAGTTCGTGGGCCTGCGCAATTTCGAGGTGCTGTTCAACAACGCAGCCTTTTCGCGG
GCGCTGATCAATAACGGGATCATCATTTTCGTTTCAGTACTCCTGCAGATCCCGCTGGCCCTCTGGCTGGCGATGATGCT
CGCGCAGCGGATCGCCGGCGTCGTCGCCTTCCGGCTGATCTTCTTTCTGCCCTACGTGCTGGCGGATGTCGCGGCCGGTC
TCATCTGGCGCTTCGTCTATGACGGAGACTACGGCCTCGTGGCCGCGGTCGCCGGCTTCTTTGGCGTGGCCACGCCTTAC
GTGCTCGCCGATCGAAGTCTTGCGATCTATGCGGTCCTCGCCGTCATCATCTGGAAATATTTCGGCTTCCATATGATGCT
GTTCATCGCCGGCCTGCAGGCGGTGGACAGGAGCGTGCTCGAAGCTGCCGAGATCGACGGCGCGACCGGCTGGCAGAAAT
TCCGTTATGTGACGTTGCCGCTCCTTGGCTCGACCGTCAGGCTGTCGATTTTCTTCGCCGTCATCGGATCGCTGCAACTC
TTCGACCTCGTCATGCCGCTCACCGGCGGCGGGCCGTCGAACTCCACGCAGACTATGGTGACCTTCCTCTACACCTATGG
GGTAACCCGCATGCAGGTGGGGCTCGGTAGCGCGGTAGGCGTCGTCCTCTTCGTGATCTGCGTCACGCTCGCCTTCGGCT
ACAAACGGATATTCATGCGCCATGACTGA

Upstream 100 bases:

>100_bases
AAGCGCGGCGGCGGGTGGCCCCGCCGCCCGCCTTTCTTCGACGATCCGGAACGAACTGCGCGAGAACGAAATGACCGACA
CGACTGCGACGGTGACCGCG

Downstream 100 bases:

>100_bases
CACGAATTCCTCCGTTCGCATGTCCCCTGCCACCCGCCTCTATCTCTACGTGTCGCTGTCGCTGGTGGCGATGCTGGTCC
TGCTGCCGCTGGTGACGACG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MPPTASRKTVRYKSPTVRGRLPVLILFLPPALLLFTVFVILPMGEAAWYSLYRWNGYGTPTQFVGLRNFEVLFNNAAFSR
ALINNGIIIFVSVLLQIPLALWLAMMLAQRIAGVVAFRLIFFLPYVLADVAAGLIWRFVYDGDYGLVAAVAGFFGVATPY
VLADRSLAIYAVLAVIIWKYFGFHMMLFIAGLQAVDRSVLEAAEIDGATGWQKFRYVTLPLLGSTVRLSIFFAVIGSLQL
FDLVMPLTGGGPSNSTQTMVTFLYTYGVTRMQVGLGSAVGVVLFVICVTLAFGYKRIFMRHD

Sequences:

>Translated_302_residues
MPPTASRKTVRYKSPTVRGRLPVLILFLPPALLLFTVFVILPMGEAAWYSLYRWNGYGTPTQFVGLRNFEVLFNNAAFSR
ALINNGIIIFVSVLLQIPLALWLAMMLAQRIAGVVAFRLIFFLPYVLADVAAGLIWRFVYDGDYGLVAAVAGFFGVATPY
VLADRSLAIYAVLAVIIWKYFGFHMMLFIAGLQAVDRSVLEAAEIDGATGWQKFRYVTLPLLGSTVRLSIFFAVIGSLQL
FDLVMPLTGGGPSNSTQTMVTFLYTYGVTRMQVGLGSAVGVVLFVICVTLAFGYKRIFMRHD
>Mature_301_residues
PPTASRKTVRYKSPTVRGRLPVLILFLPPALLLFTVFVILPMGEAAWYSLYRWNGYGTPTQFVGLRNFEVLFNNAAFSRA
LINNGIIIFVSVLLQIPLALWLAMMLAQRIAGVVAFRLIFFLPYVLADVAAGLIWRFVYDGDYGLVAAVAGFFGVATPYV
LADRSLAIYAVLAVIIWKYFGFHMMLFIAGLQAVDRSVLEAAEIDGATGWQKFRYVTLPLLGSTVRLSIFFAVIGSLQLF
DLVMPLTGGGPSNSTQTMVTFLYTYGVTRMQVGLGSAVGVVLFVICVTLAFGYKRIFMRHD

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=284, Percent_Identity=30.6338028169014, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787570, Length=234, Percent_Identity=26.4957264957265, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1790465, Length=257, Percent_Identity=25.2918287937743, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33403; Mature: 33272

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPTASRKTVRYKSPTVRGRLPVLILFLPPALLLFTVFVILPMGEAAWYSLYRWNGYGTP
CCCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCC
TQFVGLRNFEVLFNNAAFSRALINNGIIIFVSVLLQIPLALWLAMMLAQRIAGVVAFRLI
HHHHCCCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLPYVLADVAAGLIWRFVYDGDYGLVAAVAGFFGVATPYVLADRSLAIYAVLAVIIWKY
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHH
FGFHMMLFIAGLQAVDRSVLEAAEIDGATGWQKFRYVTLPLLGSTVRLSIFFAVIGSLQL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEHHHCHHHHHHHHHHHHHHHHH
FDLVMPLTGGGPSNSTQTMVTFLYTYGVTRMQVGLGSAVGVVLFVICVTLAFGYKRIFMR
HHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
HD
CC
>Mature Secondary Structure 
PPTASRKTVRYKSPTVRGRLPVLILFLPPALLLFTVFVILPMGEAAWYSLYRWNGYGTP
CCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCC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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]