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The map label for this gene is yurM [H]

Identifier: 150398145

GI number: 150398145

Start: 3096750

End: 3097598

Strand: Reverse

Name: yurM [H]

Synonym: Smed_2948

Alternate gene names: 150398145

Gene position: 3097598-3096750 (Counterclockwise)

Preceding gene: 150398146

Following gene: 150398144

Centisome position: 81.91

GC content: 58.89

Gene sequence:

>849_bases
ATGACTGACACGAATTCCTCCGTTCGCATGTCCCCTGCCACCCGCCTCTATCTCTACGTGTCGCTGTCGCTGGTGGCGAT
GCTGGTCCTGCTGCCGCTGGTGACGACGGCGCTCGGCGGTTTCAAGTCGCTTGGCGACCTGCGCGTCAATCCCTTCGGCC
TTCCATCGGAATGGCTGTGGTCGAACTATCTCGATATCCTTTTCGGCGACCGCTATTGGCGGCAGATGCTGAACTCGCTG
TTCATCGCTGCAATGACGGTGGGACTGACCGTGATCGTCTCGGCCATGGCCGCCTTCACATTCGCCCATGTCAGGTTTTT
CGGCTCGAACCATTTGCTGAACTATTTCCTGATAGGGCTCATGTTCCCGGCGGCAACCGCGATCCTGCCGCTCTTCATCC
GCATCCGCGACCTCGGCCTGCTGGATACCTATTGGGGCGTCATCCTGCCTCAGGTCGCGTTTGGTCTCGGCATGAGCATC
CTGCTCTTCCGCAATTATTTCCGGAACTTGCCGGAAGAACTCTTCCAGGCCGCCTTCGTCGACGGCTGCGGCTACATTCG
CTTCTTCTGGTACATCTCCCTGCCGCTTTCGCGGCCCATCGTCTCGACGGTTGGCATCATCACTTTCGTCCATAGCTGGA
ACAGCTACATCCTGCCGCTCATCATGCTGAACACGGAGGCTAAATATCCGTGGCCGCTGGGCATCATGGTCTATCGCGGC
GAATTCGGTACCGACTGGCAGCTCGTGCTCGCTTTCATCACGCTGACGATCCTGCCGACGGTGATCGTCTTTTTCCTCGC
CCAGAAGCACATTATCGCCGGCCTGACCGCCGGCGCGGTGAAATCCTGA

Upstream 100 bases:

>100_bases
GTAACCCGCATGCAGGTGGGGCTCGGTAGCGCGGTAGGCGTCGTCCTCTTCGTGATCTGCGTCACGCTCGCCTTCGGCTA
CAAACGGATATTCATGCGCC

Downstream 100 bases:

>100_bases
GCATCCGTTCCCCTGATCCCTCGTTCCAAGGAGAAAGCATATGGCATCGGTCGACCTCAGGGATATTCGCAAGAGCTATG
CTGCCCTCGAGGTGATCCAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTDTNSSVRMSPATRLYLYVSLSLVAMLVLLPLVTTALGGFKSLGDLRVNPFGLPSEWLWSNYLDILFGDRYWRQMLNSL
FIAAMTVGLTVIVSAMAAFTFAHVRFFGSNHLLNYFLIGLMFPAATAILPLFIRIRDLGLLDTYWGVILPQVAFGLGMSI
LLFRNYFRNLPEELFQAAFVDGCGYIRFFWYISLPLSRPIVSTVGIITFVHSWNSYILPLIMLNTEAKYPWPLGIMVYRG
EFGTDWQLVLAFITLTILPTVIVFFLAQKHIIAGLTAGAVKS

Sequences:

>Translated_282_residues
MTDTNSSVRMSPATRLYLYVSLSLVAMLVLLPLVTTALGGFKSLGDLRVNPFGLPSEWLWSNYLDILFGDRYWRQMLNSL
FIAAMTVGLTVIVSAMAAFTFAHVRFFGSNHLLNYFLIGLMFPAATAILPLFIRIRDLGLLDTYWGVILPQVAFGLGMSI
LLFRNYFRNLPEELFQAAFVDGCGYIRFFWYISLPLSRPIVSTVGIITFVHSWNSYILPLIMLNTEAKYPWPLGIMVYRG
EFGTDWQLVLAFITLTILPTVIVFFLAQKHIIAGLTAGAVKS
>Mature_281_residues
TDTNSSVRMSPATRLYLYVSLSLVAMLVLLPLVTTALGGFKSLGDLRVNPFGLPSEWLWSNYLDILFGDRYWRQMLNSLF
IAAMTVGLTVIVSAMAAFTFAHVRFFGSNHLLNYFLIGLMFPAATAILPLFIRIRDLGLLDTYWGVILPQVAFGLGMSIL
LFRNYFRNLPEELFQAAFVDGCGYIRFFWYISLPLSRPIVSTVGIITFVHSWNSYILPLIMLNTEAKYPWPLGIMVYRGE
FGTDWQLVLAFITLTILPTVIVFFLAQKHIIAGLTAGAVKS

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=207, Percent_Identity=34.7826086956522, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1787571, Length=275, Percent_Identity=28, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1790464, Length=252, Percent_Identity=30.1587301587302, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31750; Mature: 31619

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDTNSSVRMSPATRLYLYVSLSLVAMLVLLPLVTTALGGFKSLGDLRVNPFGLPSEWLW
CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
SNYLDILFGDRYWRQMLNSLFIAAMTVGLTVIVSAMAAFTFAHVRFFGSNHLLNYFLIGL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MFPAATAILPLFIRIRDLGLLDTYWGVILPQVAFGLGMSILLFRNYFRNLPEELFQAAFV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGCGYIRFFWYISLPLSRPIVSTVGIITFVHSWNSYILPLIMLNTEAKYPWPLGIMVYRG
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHEEEECCCCCCCCEEEEEEEC
EFGTDWQLVLAFITLTILPTVIVFFLAQKHIIAGLTAGAVKS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]