Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150398131

Identifier: 150398131

GI number: 150398131

Start: 3080586

End: 3081677

Strand: Direct

Name: 150398131

Synonym: Smed_2934

Alternate gene names: NA

Gene position: 3080586-3081677 (Clockwise)

Preceding gene: 150398130

Following gene: 150398148

Centisome position: 81.46

GC content: 62.45

Gene sequence:

>1092_bases
ATGATCACCTTCACCAGACCCGTCCGCGATCTCGCGGCCAAGGCGACCGACTGCCTGTTGTGGCTCACGGCATCGTTCCA
CATACTGATGGCCGCGAGCCTCCTTGCCGCCCTGCTCTATGTCTCGGAGGCTCGGGCGGATGAGACGGATTGCGTCGGCA
GCAATATTTTGACCGGACTCGAAAATTCTGATCCTGCCCGTCTGGCGGCTTTGCGTGCGGAAGCGGCGGCGATACCCAAC
GGAAAGGGCCTGCTCTGGCGAATCGAAGATCCCGCCGCTCAAGGCCAGGGACGGGCGCCCTCCTTTCTGCTCGGCACCAT
GCATGTCAGCGACCCGCGCGTGCTGGCGATGCCTGGCGGGGCGGCGCAAGCCTTCGCAAAAGCGCGGACCGTCATCGTGG
AATCCGACGAGATTATCGATCAGAACCGGGCGACCGCCGCGATCATGATGCGGCCCGATCTGACCATGTTCACCGGCGAC
AAGACGATCAACGACTTCCTGAAGCCGGAGGACCTCGCCCTTCTCGAAGGCGGACTGAAGGCTCGCGGCATCCCCCTGCC
CCTCGTCACCAGGATGAAGCCCTGGATGATCGCCAGCTTCGTGGCCCTGCCGGCCTGCGAATTCTCACGCAAGGCGGCCG
GCGCCTCCTTCCTCGATAAGAAGCTCGCCGAGGACGCGGTGAGGGAGGGCAAGACGCTCAAGGGGCTCGAAACGCTGGTC
GAACAGCTTGCGGCAATGGATTCTCTGCCGGTCGAACTGCACTTGAAGGCATTGATCGAAACGCTCGCTCTCGGCAAGAC
GATCGACGACGTGTTCACGACGACCACCGATCTCTATCTTTCCGGCGAGACGGGCACCATCATGCCCATGATGAAACTGG
TCTCCGCCGGGCTTTCGCCTAATGATGCCGGCTATGCCGAATTCGAGCAAAGGATCGTCGTCGACCGCAACAGGATCATG
GCGGACCGTGCCGGACCTATCCTGAGGGACGGCGGCGCCTTCATGGCCGTGGGCGCGCTGCATCTTCCGGGCAAGGAAGG
CCTGGTCGAACTTCTGCGGCAAGAGGGTTTTAAGGTTACGCGGGAGGAATGA

Upstream 100 bases:

>100_bases
CATCCGCGCGCCTAAAATCCGACGCGCTTGGCCGTTAACCAAGTGCGTTAAGGAACCCGTGACCGAGGGGGTGTAGGTTC
CAGCAAATGCGGGGGCATCC

Downstream 100 bases:

>100_bases
CCGGCGCTCGCGACCGGTCGTTCACCCCCGCCAGTAATGTCGGGACGATCGCCTTGTGGAAGGGCATGACTGCAGCGAGA
TAGAGCCGGCCGAATAGATT

Product: GumN family protein

Products: NA

Alternate protein names: GumN Protein; GumN-Family Protein; Gumn Family Protein; Secreted Protein; Lipoprotein

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MITFTRPVRDLAAKATDCLLWLTASFHILMAASLLAALLYVSEARADETDCVGSNILTGLENSDPARLAALRAEAAAIPN
GKGLLWRIEDPAAQGQGRAPSFLLGTMHVSDPRVLAMPGGAAQAFAKARTVIVESDEIIDQNRATAAIMMRPDLTMFTGD
KTINDFLKPEDLALLEGGLKARGIPLPLVTRMKPWMIASFVALPACEFSRKAAGASFLDKKLAEDAVREGKTLKGLETLV
EQLAAMDSLPVELHLKALIETLALGKTIDDVFTTTTDLYLSGETGTIMPMMKLVSAGLSPNDAGYAEFEQRIVVDRNRIM
ADRAGPILRDGGAFMAVGALHLPGKEGLVELLRQEGFKVTREE

Sequences:

>Translated_363_residues
MITFTRPVRDLAAKATDCLLWLTASFHILMAASLLAALLYVSEARADETDCVGSNILTGLENSDPARLAALRAEAAAIPN
GKGLLWRIEDPAAQGQGRAPSFLLGTMHVSDPRVLAMPGGAAQAFAKARTVIVESDEIIDQNRATAAIMMRPDLTMFTGD
KTINDFLKPEDLALLEGGLKARGIPLPLVTRMKPWMIASFVALPACEFSRKAAGASFLDKKLAEDAVREGKTLKGLETLV
EQLAAMDSLPVELHLKALIETLALGKTIDDVFTTTTDLYLSGETGTIMPMMKLVSAGLSPNDAGYAEFEQRIVVDRNRIM
ADRAGPILRDGGAFMAVGALHLPGKEGLVELLRQEGFKVTREE
>Mature_363_residues
MITFTRPVRDLAAKATDCLLWLTASFHILMAASLLAALLYVSEARADETDCVGSNILTGLENSDPARLAALRAEAAAIPN
GKGLLWRIEDPAAQGQGRAPSFLLGTMHVSDPRVLAMPGGAAQAFAKARTVIVESDEIIDQNRATAAIMMRPDLTMFTGD
KTINDFLKPEDLALLEGGLKARGIPLPLVTRMKPWMIASFVALPACEFSRKAAGASFLDKKLAEDAVREGKTLKGLETLV
EQLAAMDSLPVELHLKALIETLALGKTIDDVFTTTTDLYLSGETGTIMPMMKLVSAGLSPNDAGYAEFEQRIVVDRNRIM
ADRAGPILRDGGAFMAVGALHLPGKEGLVELLRQEGFKVTREE

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39031; Mature: 39031

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFTRPVRDLAAKATDCLLWLTASFHILMAASLLAALLYVSEARADETDCVGSNILTGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHCCC
ENSDPARLAALRAEAAAIPNGKGLLWRIEDPAAQGQGRAPSFLLGTMHVSDPRVLAMPGG
CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEECCC
AAQAFAKARTVIVESDEIIDQNRATAAIMMRPDLTMFTGDKTINDFLKPEDLALLEGGLK
HHHHHHHHHEEEEECHHHHCCCCCEEEEEECCCCEEEECCCHHHHHCCCCHHHHHHCCCC
ARGIPLPLVTRMKPWMIASFVALPACEFSRKAAGASFLDKKLAEDAVREGKTLKGLETLV
CCCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHH
EQLAAMDSLPVELHLKALIETLALGKTIDDVFTTTTDLYLSGETGTIMPMMKLVSAGLSP
HHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCC
NDAGYAEFEQRIVVDRNRIMADRAGPILRDGGAFMAVGALHLPGKEGLVELLRQEGFKVT
CCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEEEECCCHHHHHHHHHHCCCCCC
REE
CCC
>Mature Secondary Structure
MITFTRPVRDLAAKATDCLLWLTASFHILMAASLLAALLYVSEARADETDCVGSNILTGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHCCC
ENSDPARLAALRAEAAAIPNGKGLLWRIEDPAAQGQGRAPSFLLGTMHVSDPRVLAMPGG
CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEECCC
AAQAFAKARTVIVESDEIIDQNRATAAIMMRPDLTMFTGDKTINDFLKPEDLALLEGGLK
HHHHHHHHHEEEEECHHHHCCCCCEEEEEECCCCEEEECCCHHHHHCCCCHHHHHHCCCC
ARGIPLPLVTRMKPWMIASFVALPACEFSRKAAGASFLDKKLAEDAVREGKTLKGLETLV
CCCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHH
EQLAAMDSLPVELHLKALIETLALGKTIDDVFTTTTDLYLSGETGTIMPMMKLVSAGLSP
HHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCC
NDAGYAEFEQRIVVDRNRIMADRAGPILRDGGAFMAVGALHLPGKEGLVELLRQEGFKVT
CCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEEEECCCHHHHHHHHHHCCCCCC
REE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA