Click here to switch to the map view.

The map label for this gene is cheW [H]

Identifier: 150398090

GI number: 150398090

Start: 3033587

End: 3034066

Strand: Direct

Name: cheW [H]

Synonym: Smed_2892

Alternate gene names: 150398090

Gene position: 3033587-3034066 (Clockwise)

Preceding gene: 150398089

Following gene: 150398091

Centisome position: 80.21

GC content: 60.0

Gene sequence:

>480_bases
ATGACAACCATGCCGAAAGCAGCCGCATTTGACGGCGAGACGCTTGAGATCATAGCGTTCCGCCTGCACGAACAGGAATT
TTGCGTCAAGACCACGACGATCCGCGAGATCCGCGGCTGGGCCCCGTCGACGCCCATTCCGCATGCTCCGCCGGAGGTGA
TCGGCGTTATGAATCTGCGCGGTACGGTGATCCCTATCATAGACCTCGCTCACAAGCTCGGCATGAAGTCGACCGTCACC
AACGAACGCAGCGCGATCGTGGTCGCCGAGGTCCACAACATGGTCATCGGGCTCGTCGTCGACCGCGTTTCCGACATTCT
GACCGTGCAGGGCAGCCAGGTGCAGCCCGTGCCGGAAGTCACCGCCTCTTTCGACAAGAGCTTTGCGGAAGGCATCATCG
CCAATGATCAGGGCATGATCTGCTTCCTCAATCTCGCCCGCATGTTCAAGGAGCGGGAAAACGACGAACTGGCCGCCTGA

Upstream 100 bases:

>100_bases
TTGCGCCGCGCCGGATGTCATCGGCGGACCACCACTCCCGGATGAGCACTGCGCCTGCAGCATCCAGGGGAGCGTCTACT
GAAAGCTGAAAGGACTTTCG

Downstream 100 bases:

>100_bases
GCCTGCGCATCGTCAGCTTTCTGAGAACGGTTCGGCAAAACGAATCGTCCGCCGACAATGCGGACCTGCGCGCGCATCAA
AAATTTCAGAGGGGATCATG

Product: putative CheW protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTTMPKAAAFDGETLEIIAFRLHEQEFCVKTTTIREIRGWAPSTPIPHAPPEVIGVMNLRGTVIPIIDLAHKLGMKSTVT
NERSAIVVAEVHNMVIGLVVDRVSDILTVQGSQVQPVPEVTASFDKSFAEGIIANDQGMICFLNLARMFKERENDELAA

Sequences:

>Translated_159_residues
MTTMPKAAAFDGETLEIIAFRLHEQEFCVKTTTIREIRGWAPSTPIPHAPPEVIGVMNLRGTVIPIIDLAHKLGMKSTVT
NERSAIVVAEVHNMVIGLVVDRVSDILTVQGSQVQPVPEVTASFDKSFAEGIIANDQGMICFLNLARMFKERENDELAA
>Mature_158_residues
TTMPKAAAFDGETLEIIAFRLHEQEFCVKTTTIREIRGWAPSTPIPHAPPEVIGVMNLRGTVIPIIDLAHKLGMKSTVTN
ERSAIVVAEVHNMVIGLVVDRVSDILTVQGSQVQPVPEVTASFDKSFAEGIIANDQGMICFLNLARMFKERENDELAA

Specific function: May be involved in the transmission of sensory signals (Potential) [H]

COG id: COG0835

COG function: function code NT; Chemotaxis signal transduction protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cheW-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788196, Length=138, Percent_Identity=30.4347826086957, Blast_Score=93, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002545 [H]

Pfam domain/function: PF01584 CheW [H]

EC number: NA

Molecular weight: Translated: 17427; Mature: 17296

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50851 CHEW

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMPKAAAFDGETLEIIAFRLHEQEFCVKTTTIREIRGWAPSTPIPHAPPEVIGVMNLR
CCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCC
GTVIPIIDLAHKLGMKSTVTNERSAIVVAEVHNMVIGLVVDRVSDILTVQGSQVQPVPEV
CCCHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHH
TASFDKSFAEGIIANDQGMICFLNLARMFKERENDELAA
HHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTMPKAAAFDGETLEIIAFRLHEQEFCVKTTTIREIRGWAPSTPIPHAPPEVIGVMNLR
CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCC
GTVIPIIDLAHKLGMKSTVTNERSAIVVAEVHNMVIGLVVDRVSDILTVQGSQVQPVPEV
CCCHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHH
TASFDKSFAEGIIANDQGMICFLNLARMFKERENDELAA
HHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA