| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is phaG [H]
Identifier: 150398009
GI number: 150398009
Start: 2937003
End: 2937374
Strand: Direct
Name: phaG [H]
Synonym: Smed_2811
Alternate gene names: 150398009
Gene position: 2937003-2937374 (Clockwise)
Preceding gene: 150398008
Following gene: 150398012
Centisome position: 77.66
GC content: 63.98
Gene sequence:
>372_bases ATGAGCCATCTGACCGACCTGCCGCCATGGGCGGCAGCCCTCGTCTGCGGATTGCTGCTGATCGGCGCGGCGACCACCTT CATCGGATCGCTCGGGCTGCTGCGCCTCCCCGATTTCTATGCCCGCCTGCACGCCCCGACGATAGCGACCAGCGGCGGCA CCATCCTCATTTGCCTTGCGTCGATCCTCTGCTTCGCCGTTCTGCAGAGCCGCTGGGTGTTCCACGAAGTTCTGATCATC TTCTTCATGACGGTGACGACACCCGTGACGCTGATGCTGCTCGGCCAGGCGACACTCTACCGCGACCGCTTCGAGAACCG GCCGGGGGTTCCACGGAAGTCGCGGCCTTCGGGCAGCAAGATCGAAGAGTAA
Upstream 100 bases:
>100_bases CAAACACGGTCTATTTCGAAACGGCGCTCATCATCGCGGTCATCGGCTTCGCATCGTCGATCGCGCTTGCCAAGTTCCTC ATGCGCGGCGAGGTGATCGA
Downstream 100 bases:
>100_bases TGTGCGCAGGAACTGCGCGGTGCTGTCGCTTCAATCGCGCCCGCGGAAGCGCCGTTGATATGCCGGGTCGTAGAGCGAGC TTTCGCGGAAATCCGACGCC
Product: monovalent cation/proton antiporter subunit MnhG/PhaG
Products: NA
Alternate protein names: pH adaptation potassium efflux system protein G; Pha system subunit G [H]
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSHLTDLPPWAAALVCGLLLIGAATTFIGSLGLLRLPDFYARLHAPTIATSGGTILICLASILCFAVLQSRWVFHEVLII FFMTVTTPVTLMLLGQATLYRDRFENRPGVPRKSRPSGSKIEE
Sequences:
>Translated_123_residues MSHLTDLPPWAAALVCGLLLIGAATTFIGSLGLLRLPDFYARLHAPTIATSGGTILICLASILCFAVLQSRWVFHEVLII FFMTVTTPVTLMLLGQATLYRDRFENRPGVPRKSRPSGSKIEE >Mature_122_residues SHLTDLPPWAAALVCGLLLIGAATTFIGSLGLLRLPDFYARLHAPTIATSGGTILICLASILCFAVLQSRWVFHEVLIIF FMTVTTPVTLMLLGQATLYRDRFENRPGVPRKSRPSGSKIEE
Specific function: Part of a K(+) efflux system which is required for the adaptation of R.meliloti to alkaline pH as well as for the infection process during symbiotic nodule development [H]
COG id: COG1320
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhG subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit G family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005133 [H]
Pfam domain/function: PF03334 PhaG_MnhG_YufB [H]
EC number: NA
Molecular weight: Translated: 13456; Mature: 13325
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLTDLPPWAAALVCGLLLIGAATTFIGSLGLLRLPDFYARLHAPTIATSGGTILICLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHCCCCCCCCCHHHHHHH SILCFAVLQSRWVFHEVLIIFFMTVTTPVTLMLLGQATLYRDRFENRPGVPRKSRPSGSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC IEE CCC >Mature Secondary Structure SHLTDLPPWAAALVCGLLLIGAATTFIGSLGLLRLPDFYARLHAPTIATSGGTILICLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHCCCCCCCCCHHHHHHH SILCFAVLQSRWVFHEVLIIFFMTVTTPVTLMLLGQATLYRDRFENRPGVPRKSRPSGSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC IEE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9680201; 11481430 [H]