Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is glgP [H]

Identifier: 150397937

GI number: 150397937

Start: 2852081

End: 2854546

Strand: Direct

Name: glgP [H]

Synonym: Smed_2739

Alternate gene names: 150397937

Gene position: 2852081-2854546 (Clockwise)

Preceding gene: 150397936

Following gene: 150397938

Centisome position: 75.41

GC content: 61.23

Gene sequence:

>2466_bases
ATGATGAATCGGCTCTCCAACACCGAACTGCCGCAACCCGCCCCCAGATCCTCGGAACCCAGCCAGCTTGCAGTCGAAAT
CCTCGAGCGCCTGAAGTATCGCATCGGCAAGGATCCGAAAGTCGCCAAGCCGCATGACTGGCTGACGGCCGCCATTCTCG
TCGCACGTGACCGCATCACCGACAAATGGATGGATTCCACCCGCAAGACCTACTCGACCGGTGCAAAGCGCGTCTATTAC
ATGTCGCTCGAGTTCCTCATCGGCCGCATGATGCGCGATGCGATGACGAATCTGGGGCTTATGGACGAAATGCGGGACGC
CCTCGCTTCGCTTGGTGTGGATATCGACGTGATCGCCGCGCTCGAGCCGGACGCGGCACTCGGCAATGGCGGTCTCGGCC
GCCTCGCCGCCTGCTTCATGGAATCGATGGCGACCGTCGACGTGCCTGCCTATGGCTATGGCATCCGCTACATGCACGGT
CTCTTTCGCCAGCAGATGGCCGACGGTTGGCAGGTGGAACTGCCGGAAACGTGGCTGGCCCATGGCAACCCCTGGGAATT
CGAACGCCGCGAATGCTCCTACGAGATCGGCTATGGCGGCAGCGTGGAAACGGTCAACATCGACGAGGAAGTGCAGCGCT
ACGTTTGGAAGCCGGCTGAGCGCGTCATCGCCACCGCCTTCGATACGCCCGCCGTCGGCTGGCGGGCGACGCGTGTTAAC
ACGCTCCGCCTCTGGGCCGCGCAGCCGATCGACCCGATCCTGCTGGACGCCTTCAATGCGGGCGACCATATCGGGGCTCT
GCGCGAAAGCAACAAGGCCGAAAGCCTGACGCGCGTGCTCTATCCGGCCGACGCCACGCCGGCCGGCCAGGAACTCAGGC
TCCGACAGGAATATTTCTTTTCCTCCGCCTCGCTTCAGGACATCCTGCGCCGGCACCTGCAGCAATATCCGGATTTCACG
TCGCTTCCCGATGCCGTTGCCATTCAGCTCAACGACACGCATCCAGCCGTCTCCGTGGCCGAACTCGTACGTCTTTTGAG
CGACGTCCACGGATTGGATTTCGAGCAGTCCTGGGACATCGCACGACGGACCTTCTCCTATACCAACCACACCCTGCTGC
CTGAAGCGCTCGAGAGCTGGCCGGTTCCGCTCTTCGAGAGGCTGCTGCCTCGCCACATGCAGATCGTCTACGCCATCAAC
GCCAAGATTTTGATCGAAGCGCGCAGGGTGAGGTACGCGACGGACGAGGCGATCCGCAACATCTCGCTCATCGACGAGAC
GGGCGAGCGGCGCGTCCGCATGGGCAATCTGGCCTTTGTCGGCTCGCACTCGATCAACGGCGTATCGGCTCTGCATACCG
AGCTGATGAAGGAAACTGTCTTCGCCGATCTGCATGCGCTCTATCCGGACCGCATCAACAACAAGACCAACGGCATCACG
CCGCGACGTTGGCTCATGCAGTGCAATCCGGATCTGTTCGGTCTGATCCGCGAGGCGATCGGCGACGAATTCATAGACAA
TACCGAGGCGCTTCAGGCGCTCGACGCCTTTGCCGATAACGCGGATTTCCAGGAGCGTTTCGCAGCCGTCAAACGCGCCA
ACAAAGTGCGGCTTGCGAAGCTGATCCAGGCCAATCTCGGCATCCGGCTCGATCCCTCGGCGATGTTCGACATCCAGATC
AAGCGCATCCACGAATACAAGCGGCAGCTGCTGAACCTTATCGAAGCCGTGGCGCTTTACGATCAGATCCGCTCACACCC
CGAGCTCGACTGGGTGCCGCGCGTCAAGCTCTTCGCCGGAAAAGCGGCGCCAAGCTACCACAACGCCAAGCTGATCATAA
AACTTGCCAATGACATCGCCCGCGTCATCAACAACGATCCGGCGGTCCGCGGGCTCCTGAAAGTCGTCTTCATCCCGAAC
TACAACGTTTCGCTTGCGGAGGTGATGGTCCCGGCGGCCGACCTTTCGGAGCAGATATCGACGGCCGGCATGGAAGCGTC
GGGCACCGGAAACATGAAGTTCGCCCTGAACGGAGCGCTGACCATCGGCACGCTCGACGGGGCTAATGTCGAGATGCGAG
ACTGGGTCGGAGAGGAGAACATCCAGATCTTCGGCATGACTGCCGAGGACGTGGGCAAGGCGCGGGCCGAAGGGCACAAT
CCGCGCGCCATCATCGAAAATTCGCGTGAACTCTCGCAAGCGCTCTCGGCGATCGCGTCAGGCGTCTTCTCCCCCGATGA
TCGAAATCGCTTCTCGGGCCTCGTCGACGGACTCTATAACCACGACTGGTTCATGGTTGCGGCCGATTTCGAAGCCTACG
CCAAGGCGCAGCGCGAAATCGACCAGCTCTGGACCAAGCCAGCCGCCTGGTATTCGAAGGCGGTCCGCAATACCGCCCGG
ATGGGCTGGTTCTCATCCGATCGAACGATCCGGCAATATGCCGGAGAGATCTGGAGAGCCGGATGA

Upstream 100 bases:

>100_bases
AACACCTGTTGCAAGCGCTTCGGATCGATGCATAAATTGCCTTGACCTGGTCGGTTCCGACCCGGGGCTTCCGAAATGCA
ATAAGGGTATGACAGTTCTC

Downstream 100 bases:

>100_bases
CGGTTCCCCCCGGCCAGGATCCAGCTCCCGCCCCGTCAGGCACGCTGCCAGCGCCGGAAATTGCGGCAATACTTTCCGGC
ACCCATAGCGACCCCTTTGC

Product: glycogen/starch/alpha-glucan phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 821; Mature: 821

Protein sequence:

>821_residues
MMNRLSNTELPQPAPRSSEPSQLAVEILERLKYRIGKDPKVAKPHDWLTAAILVARDRITDKWMDSTRKTYSTGAKRVYY
MSLEFLIGRMMRDAMTNLGLMDEMRDALASLGVDIDVIAALEPDAALGNGGLGRLAACFMESMATVDVPAYGYGIRYMHG
LFRQQMADGWQVELPETWLAHGNPWEFERRECSYEIGYGGSVETVNIDEEVQRYVWKPAERVIATAFDTPAVGWRATRVN
TLRLWAAQPIDPILLDAFNAGDHIGALRESNKAESLTRVLYPADATPAGQELRLRQEYFFSSASLQDILRRHLQQYPDFT
SLPDAVAIQLNDTHPAVSVAELVRLLSDVHGLDFEQSWDIARRTFSYTNHTLLPEALESWPVPLFERLLPRHMQIVYAIN
AKILIEARRVRYATDEAIRNISLIDETGERRVRMGNLAFVGSHSINGVSALHTELMKETVFADLHALYPDRINNKTNGIT
PRRWLMQCNPDLFGLIREAIGDEFIDNTEALQALDAFADNADFQERFAAVKRANKVRLAKLIQANLGIRLDPSAMFDIQI
KRIHEYKRQLLNLIEAVALYDQIRSHPELDWVPRVKLFAGKAAPSYHNAKLIIKLANDIARVINNDPAVRGLLKVVFIPN
YNVSLAEVMVPAADLSEQISTAGMEASGTGNMKFALNGALTIGTLDGANVEMRDWVGEENIQIFGMTAEDVGKARAEGHN
PRAIIENSRELSQALSAIASGVFSPDDRNRFSGLVDGLYNHDWFMVAADFEAYAKAQREIDQLWTKPAAWYSKAVRNTAR
MGWFSSDRTIRQYAGEIWRAG

Sequences:

>Translated_821_residues
MMNRLSNTELPQPAPRSSEPSQLAVEILERLKYRIGKDPKVAKPHDWLTAAILVARDRITDKWMDSTRKTYSTGAKRVYY
MSLEFLIGRMMRDAMTNLGLMDEMRDALASLGVDIDVIAALEPDAALGNGGLGRLAACFMESMATVDVPAYGYGIRYMHG
LFRQQMADGWQVELPETWLAHGNPWEFERRECSYEIGYGGSVETVNIDEEVQRYVWKPAERVIATAFDTPAVGWRATRVN
TLRLWAAQPIDPILLDAFNAGDHIGALRESNKAESLTRVLYPADATPAGQELRLRQEYFFSSASLQDILRRHLQQYPDFT
SLPDAVAIQLNDTHPAVSVAELVRLLSDVHGLDFEQSWDIARRTFSYTNHTLLPEALESWPVPLFERLLPRHMQIVYAIN
AKILIEARRVRYATDEAIRNISLIDETGERRVRMGNLAFVGSHSINGVSALHTELMKETVFADLHALYPDRINNKTNGIT
PRRWLMQCNPDLFGLIREAIGDEFIDNTEALQALDAFADNADFQERFAAVKRANKVRLAKLIQANLGIRLDPSAMFDIQI
KRIHEYKRQLLNLIEAVALYDQIRSHPELDWVPRVKLFAGKAAPSYHNAKLIIKLANDIARVINNDPAVRGLLKVVFIPN
YNVSLAEVMVPAADLSEQISTAGMEASGTGNMKFALNGALTIGTLDGANVEMRDWVGEENIQIFGMTAEDVGKARAEGHN
PRAIIENSRELSQALSAIASGVFSPDDRNRFSGLVDGLYNHDWFMVAADFEAYAKAQREIDQLWTKPAAWYSKAVRNTAR
MGWFSSDRTIRQYAGEIWRAG
>Mature_821_residues
MMNRLSNTELPQPAPRSSEPSQLAVEILERLKYRIGKDPKVAKPHDWLTAAILVARDRITDKWMDSTRKTYSTGAKRVYY
MSLEFLIGRMMRDAMTNLGLMDEMRDALASLGVDIDVIAALEPDAALGNGGLGRLAACFMESMATVDVPAYGYGIRYMHG
LFRQQMADGWQVELPETWLAHGNPWEFERRECSYEIGYGGSVETVNIDEEVQRYVWKPAERVIATAFDTPAVGWRATRVN
TLRLWAAQPIDPILLDAFNAGDHIGALRESNKAESLTRVLYPADATPAGQELRLRQEYFFSSASLQDILRRHLQQYPDFT
SLPDAVAIQLNDTHPAVSVAELVRLLSDVHGLDFEQSWDIARRTFSYTNHTLLPEALESWPVPLFERLLPRHMQIVYAIN
AKILIEARRVRYATDEAIRNISLIDETGERRVRMGNLAFVGSHSINGVSALHTELMKETVFADLHALYPDRINNKTNGIT
PRRWLMQCNPDLFGLIREAIGDEFIDNTEALQALDAFADNADFQERFAAVKRANKVRLAKLIQANLGIRLDPSAMFDIQI
KRIHEYKRQLLNLIEAVALYDQIRSHPELDWVPRVKLFAGKAAPSYHNAKLIIKLANDIARVINNDPAVRGLLKVVFIPN
YNVSLAEVMVPAADLSEQISTAGMEASGTGNMKFALNGALTIGTLDGANVEMRDWVGEENIQIFGMTAEDVGKARAEGHN
PRAIIENSRELSQALSAIASGVFSPDDRNRFSGLVDGLYNHDWFMVAADFEAYAKAQREIDQLWTKPAAWYSKAVRNTAR
MGWFSSDRTIRQYAGEIWRAG

Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [

COG id: COG0058

COG function: function code G; Glucan phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycogen phosphorylase family [H]

Homologues:

Organism=Homo sapiens, GI21361370, Length=796, Percent_Identity=47.7386934673367, Blast_Score=744, Evalue=0.0,
Organism=Homo sapiens, GI71037379, Length=796, Percent_Identity=47.1105527638191, Blast_Score=741, Evalue=0.0,
Organism=Homo sapiens, GI5032009, Length=806, Percent_Identity=46.6501240694789, Blast_Score=739, Evalue=0.0,
Organism=Homo sapiens, GI255653002, Length=763, Percent_Identity=46.7889908256881, Blast_Score=690, Evalue=0.0,
Organism=Homo sapiens, GI257900462, Length=663, Percent_Identity=47.3604826546003, Blast_Score=638, Evalue=0.0,
Organism=Escherichia coli, GI2367228, Length=813, Percent_Identity=47.7244772447724, Blast_Score=774, Evalue=0.0,
Organism=Escherichia coli, GI48994936, Length=747, Percent_Identity=46.4524765729585, Blast_Score=678, Evalue=0.0,
Organism=Caenorhabditis elegans, GI32566204, Length=800, Percent_Identity=47.375, Blast_Score=744, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17564550, Length=800, Percent_Identity=47.375, Blast_Score=744, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325418, Length=807, Percent_Identity=44.361833952912, Blast_Score=650, Evalue=0.0,
Organism=Drosophila melanogaster, GI78706832, Length=799, Percent_Identity=47.3091364205257, Blast_Score=736, Evalue=0.0,
Organism=Drosophila melanogaster, GI24581010, Length=799, Percent_Identity=47.3091364205257, Blast_Score=736, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011833
- InterPro:   IPR000811 [H]

Pfam domain/function: PF00343 Phosphorylase [H]

EC number: =2.4.1.1 [H]

Molecular weight: Translated: 92354; Mature: 92354

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS00102 PHOSPHORYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRLSNTELPQPAPRSSEPSQLAVEILERLKYRIGKDPKVAKPHDWLTAAILVARDRIT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
DKWMDSTRKTYSTGAKRVYYMSLEFLIGRMMRDAMTNLGLMDEMRDALASLGVDIDVIAA
HHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEE
LEPDAALGNGGLGRLAACFMESMATVDVPAYGYGIRYMHGLFRQQMADGWQVELPETWLA
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHC
HGNPWEFERRECSYEIGYGGSVETVNIDEEVQRYVWKPAERVIATAFDTPAVGWRATRVN
CCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEE
TLRLWAAQPIDPILLDAFNAGDHIGALRESNKAESLTRVLYPADATPAGQELRLRQEYFF
EEEEEECCCCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHEECCCCCCCCHHHHHHHHHHH
SSASLQDILRRHLQQYPDFTSLPDAVAIQLNDTHPAVSVAELVRLLSDVHGLDFEQSWDI
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
ARRTFSYTNHTLLPEALESWPVPLFERLLPRHMQIVYAINAKILIEARRVRYATDEAIRN
HHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHEEEEEECCEEEEEHHHHHHHHHHHHHH
ISLIDETGERRVRMGNLAFVGSHSINGVSALHTELMKETVFADLHALYPDRINNKTNGIT
HHHHCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCC
PRRWLMQCNPDLFGLIREAIGDEFIDNTEALQALDAFADNADFQERFAAVKRANKVRLAK
HHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LIQANLGIRLDPSAMFDIQIKRIHEYKRQLLNLIEAVALYDQIRSHPELDWVPRVKLFAG
HHHHCCCCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEC
KAAPSYHNAKLIIKLANDIARVINNDPAVRGLLKVVFIPNYNVSLAEVMVPAADLSEQIS
CCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHCCHHHHHHHHH
TAGMEASGTGNMKFALNGALTIGTLDGANVEMRDWVGEENIQIFGMTAEDVGKARAEGHN
HCCCCCCCCCCEEEEEECEEEEEECCCCCEEHHHCCCCCCEEEEEECHHHHHHHHHCCCC
PRAIIENSRELSQALSAIASGVFSPDDRNRFSGLVDGLYNHDWFMVAADFEAYAKAQREI
CHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH
DQLWTKPAAWYSKAVRNTARMGWFSSDRTIRQYAGEIWRAG
HHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MMNRLSNTELPQPAPRSSEPSQLAVEILERLKYRIGKDPKVAKPHDWLTAAILVARDRIT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
DKWMDSTRKTYSTGAKRVYYMSLEFLIGRMMRDAMTNLGLMDEMRDALASLGVDIDVIAA
HHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEE
LEPDAALGNGGLGRLAACFMESMATVDVPAYGYGIRYMHGLFRQQMADGWQVELPETWLA
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHC
HGNPWEFERRECSYEIGYGGSVETVNIDEEVQRYVWKPAERVIATAFDTPAVGWRATRVN
CCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEE
TLRLWAAQPIDPILLDAFNAGDHIGALRESNKAESLTRVLYPADATPAGQELRLRQEYFF
EEEEEECCCCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHEECCCCCCCCHHHHHHHHHHH
SSASLQDILRRHLQQYPDFTSLPDAVAIQLNDTHPAVSVAELVRLLSDVHGLDFEQSWDI
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
ARRTFSYTNHTLLPEALESWPVPLFERLLPRHMQIVYAINAKILIEARRVRYATDEAIRN
HHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHEEEEEECCEEEEEHHHHHHHHHHHHHH
ISLIDETGERRVRMGNLAFVGSHSINGVSALHTELMKETVFADLHALYPDRINNKTNGIT
HHHHCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCC
PRRWLMQCNPDLFGLIREAIGDEFIDNTEALQALDAFADNADFQERFAAVKRANKVRLAK
HHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LIQANLGIRLDPSAMFDIQIKRIHEYKRQLLNLIEAVALYDQIRSHPELDWVPRVKLFAG
HHHHCCCCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEC
KAAPSYHNAKLIIKLANDIARVINNDPAVRGLLKVVFIPNYNVSLAEVMVPAADLSEQIS
CCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHCCHHHHHHHHH
TAGMEASGTGNMKFALNGALTIGTLDGANVEMRDWVGEENIQIFGMTAEDVGKARAEGHN
HCCCCCCCCCCEEEEEECEEEEEECCCCCEEHHHCCCCCCEEEEEECHHHHHHHHHCCCC
PRAIIENSRELSQALSAIASGVFSPDDRNRFSGLVDGLYNHDWFMVAADFEAYAKAQREI
CHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHH
DQLWTKPAAWYSKAVRNTARMGWFSSDRTIRQYAGEIWRAG
HHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]