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The map label for this gene is 150397923

Identifier: 150397923

GI number: 150397923

Start: 2838386

End: 2838853

Strand: Direct

Name: 150397923

Synonym: Smed_2725

Alternate gene names: NA

Gene position: 2838386-2838853 (Clockwise)

Preceding gene: 150397921

Following gene: 150397930

Centisome position: 75.05

GC content: 63.25

Gene sequence:

>468_bases
ATGGATTCAAGCTCTCGTACTTCTTCGGGCGATGCGTTCGCCGCGTTCGCGATCTCCGTCCTTCGGCTCGCAGGACACTT
GACCTCCGAAGGAGATAGGCTCGCGCAGCCGTCCGGCCAGACCAGCGCTCGCTGGCAGGTCCTGGCCGCGGCCCGGCACG
GGAACATGTCGGTTGCCGAAGCCGCCCGTGCGCTTGGGCTCGCGCGACAGGGCGTGCAGCGCATCGCCGACGTTCTCAAA
ACAGAAGATCTGATCGATTATCGGGAAAACCCCTTGCATCGTCGCGCGAAGCTGATCGTGCTCACACCAGGGGGCGAGAA
GGTGCTCGCCGAAATTACCGCACGCCAAGCCATCTGGGCGAATGCGCTTGGCAGCGAAATAGGAGAGGAAAGGCTGCGTC
AGGCGACCGTGCTCGCCACCGAAATCATCGCTCTCTTCCGCGAACGAGAAAAAGCGGCCCCGCCGTAG

Upstream 100 bases:

>100_bases
CTGGATCCTTCCCCGGTTTTATTGGAGCGCGACCTTGCCAGCCGTCGCGCAATATGACAACCTATTGTCAATGTAATTGA
AATGACAACATGTTGTCAAT

Downstream 100 bases:

>100_bases
GAGCCGACCGGCAAGCCCATACATGCGGAGGCGGTCCTCGGGCGGAAAGGGTCTCCGGCGCCGCAAACTGGACGGCGCCA
GACACCTGCGACAAGCACAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDSSSRTSSGDAFAAFAISVLRLAGHLTSEGDRLAQPSGQTSARWQVLAAARHGNMSVAEAARALGLARQGVQRIADVLK
TEDLIDYRENPLHRRAKLIVLTPGGEKVLAEITARQAIWANALGSEIGEERLRQATVLATEIIALFREREKAAPP

Sequences:

>Translated_155_residues
MDSSSRTSSGDAFAAFAISVLRLAGHLTSEGDRLAQPSGQTSARWQVLAAARHGNMSVAEAARALGLARQGVQRIADVLK
TEDLIDYRENPLHRRAKLIVLTPGGEKVLAEITARQAIWANALGSEIGEERLRQATVLATEIIALFREREKAAPP
>Mature_155_residues
MDSSSRTSSGDAFAAFAISVLRLAGHLTSEGDRLAQPSGQTSARWQVLAAARHGNMSVAEAARALGLARQGVQRIADVLK
TEDLIDYRENPLHRRAKLIVLTPGGEKVLAEITARQAIWANALGSEIGEERLRQATVLATEIIALFREREKAAPP

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16694; Mature: 16694

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSSRTSSGDAFAAFAISVLRLAGHLTSEGDRLAQPSGQTSARWQVLAAARHGNMSVAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHCCCCHHHH
AARALGLARQGVQRIADVLKTEDLIDYRENPLHRRAKLIVLTPGGEKVLAEITARQAIWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCHHHHHHHHHHHHHHH
NALGSEIGEERLRQATVLATEIIALFREREKAAPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDSSSRTSSGDAFAAFAISVLRLAGHLTSEGDRLAQPSGQTSARWQVLAAARHGNMSVAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHCCCCHHHH
AARALGLARQGVQRIADVLKTEDLIDYRENPLHRRAKLIVLTPGGEKVLAEITARQAIWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCHHHHHHHHHHHHHHH
NALGSEIGEERLRQATVLATEIIALFREREKAAPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]