| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397904
Identifier: 150397904
GI number: 150397904
Start: 2814057
End: 2815460
Strand: Direct
Name: 150397904
Synonym: Smed_2706
Alternate gene names: NA
Gene position: 2814057-2815460 (Clockwise)
Preceding gene: 150397903
Following gene: 150397906
Centisome position: 74.41
GC content: 65.03
Gene sequence:
>1404_bases ATGGTGCCCAATATCTCACGCTCGACGATGTCGGGCGCCTTGCGTGTGAAGTCGCCAGCATGGCTGCTTGCGGGCTGCGC CTTCCTTACCTGTGCACCAGCGAGCGCGCAAAGCCTCGCCCCTGCAGACCAGCCGATTCCCGCCATCATCGACCCGCAGG CGACCGGCGCCGTTGCCGGCACCGATCTGTCGCCGGCCCTCGACGAGGACTTCAACCGCCTCAACCGGCGCGAGGAAACG ATCGACAGGCTGCGCAGGCGCATCGATCCGGATGACGGTCAGGCACCCGGCATTCGCATCGGGACCTTCGTTCTGAAGCC GGCGCTCAGCGAGACATTCAACCACGAACGGCAGAAGAACGGCGGCAGCAGCGAAAGCCGGAGTTTCATGGAGACCGGGC TCAAGGGGTCGCTCACCTCCGACTGGTCCCGCCACCAGCTGAGCGTGACCGGCGAAGGCGTGATCCAGGACAATATATCC GGAGAAGGCGAAGAAGAGCCGCGTGCCGACGTCAATGCCGAACTGCGCCTGGACCTTGGAGAGGAAACCACGGCCAGGCT GAGAGCAGGTTACAGCTTCGAACGCGAGGACGCGAACGATCCGAACGCCATTGCCGATGCCGAAACCCAATCCGGCGTCG ATACCTATCGCCTCGGCGCCGCGATCGAGCGCGACCTCGGTCTCATTCGCGGCGCGGTCGGCGTGGACTTCGAGCGCAGG ACCTACGGCAATGTCGACCTTGACGATGGCAGGACGCTTTCCCAGGAGGATCGCGACCGCAACCTCGCAACGCTGACCGC GCGGATAGGCTACGAGCTTTCGCCAGCGCTGATCCCCTTTCTCGAGGCCTCCGCTGGCAAGTCGGTCTATGACCTGCGCC GGGATACGTTCGGCTTCGAGCGTTCCTACGAGAGCTATGCCGGCCGGGCCGGCATGGAGGTGGATTTCGGCGAGAAGCTC AACGGGGAACTGGCGCTCGGTTACGAGACCTTTCGCTTCGACGATCGACGTCTCGAGGACTTGGGCGGCGTTTCGCTCGA CGGCCGCGTCAACTGGTCGCCTCACCGCGGGACCGACGTTCTGTTCGGCATGCTGACCTATGTCGATCCGTCGACTACAC CCGGCGAGGCGGGATCGATCAACTACGAGCTGACCAATGTGGTCACGCAGCAGCTGCGTTCGACGCTCGTCGGGCGGCTT TCGAACAGCGTCACCTGGCGCGATTTCCCTTCCGACGCCACGGCCTCGGACGAGACCGCCTGGCGAGCCGGCGCCGGACT CACCTGGGACATGAGCCGCTATCTCGCGCTCACCGGAGACCTCAGCTACGAGCGCACGAACAGGGATCAGGGCGCATCGA GCGACACCACGCGCGTCGGCGTCGGCCTGACGCTGCGGCGATGA
Upstream 100 bases:
>100_bases GGAAAAACCGCGTTCCGAGCGGCTGTACAGAAACGATTGATTAACCACGCGCCTTTACGATTGCGAAACGATTGCAATCA AATTTGCGGACAGACGGCGC
Downstream 100 bases:
>100_bases CGTGTCGCTTTGCCTCTCCGGAGAGGCCGCGCCTCCTGGCGCGGCCGGTCATCTGATCGATAATCACTTCAGGCCCTGAA GCAGCGTCTTGAGCGGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MVPNISRSTMSGALRVKSPAWLLAGCAFLTCAPASAQSLAPADQPIPAIIDPQATGAVAGTDLSPALDEDFNRLNRREET IDRLRRRIDPDDGQAPGIRIGTFVLKPALSETFNHERQKNGGSSESRSFMETGLKGSLTSDWSRHQLSVTGEGVIQDNIS GEGEEEPRADVNAELRLDLGEETTARLRAGYSFEREDANDPNAIADAETQSGVDTYRLGAAIERDLGLIRGAVGVDFERR TYGNVDLDDGRTLSQEDRDRNLATLTARIGYELSPALIPFLEASAGKSVYDLRRDTFGFERSYESYAGRAGMEVDFGEKL NGELALGYETFRFDDRRLEDLGGVSLDGRVNWSPHRGTDVLFGMLTYVDPSTTPGEAGSINYELTNVVTQQLRSTLVGRL SNSVTWRDFPSDATASDETAWRAGAGLTWDMSRYLALTGDLSYERTNRDQGASSDTTRVGVGLTLRR
Sequences:
>Translated_467_residues MVPNISRSTMSGALRVKSPAWLLAGCAFLTCAPASAQSLAPADQPIPAIIDPQATGAVAGTDLSPALDEDFNRLNRREET IDRLRRRIDPDDGQAPGIRIGTFVLKPALSETFNHERQKNGGSSESRSFMETGLKGSLTSDWSRHQLSVTGEGVIQDNIS GEGEEEPRADVNAELRLDLGEETTARLRAGYSFEREDANDPNAIADAETQSGVDTYRLGAAIERDLGLIRGAVGVDFERR TYGNVDLDDGRTLSQEDRDRNLATLTARIGYELSPALIPFLEASAGKSVYDLRRDTFGFERSYESYAGRAGMEVDFGEKL NGELALGYETFRFDDRRLEDLGGVSLDGRVNWSPHRGTDVLFGMLTYVDPSTTPGEAGSINYELTNVVTQQLRSTLVGRL SNSVTWRDFPSDATASDETAWRAGAGLTWDMSRYLALTGDLSYERTNRDQGASSDTTRVGVGLTLRR >Mature_467_residues MVPNISRSTMSGALRVKSPAWLLAGCAFLTCAPASAQSLAPADQPIPAIIDPQATGAVAGTDLSPALDEDFNRLNRREET IDRLRRRIDPDDGQAPGIRIGTFVLKPALSETFNHERQKNGGSSESRSFMETGLKGSLTSDWSRHQLSVTGEGVIQDNIS GEGEEEPRADVNAELRLDLGEETTARLRAGYSFEREDANDPNAIADAETQSGVDTYRLGAAIERDLGLIRGAVGVDFERR TYGNVDLDDGRTLSQEDRDRNLATLTARIGYELSPALIPFLEASAGKSVYDLRRDTFGFERSYESYAGRAGMEVDFGEKL NGELALGYETFRFDDRRLEDLGGVSLDGRVNWSPHRGTDVLFGMLTYVDPSTTPGEAGSINYELTNVVTQQLRSTLVGRL SNSVTWRDFPSDATASDETAWRAGAGLTWDMSRYLALTGDLSYERTNRDQGASSDTTRVGVGLTLRR
Specific function: Unknown
COG id: COG5338
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51015; Mature: 51015
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPNISRSTMSGALRVKSPAWLLAGCAFLTCAPASAQSLAPADQPIPAIIDPQATGAVAG CCCCCCCHHHCCEEEECCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEECCCCCCCEEC TDLSPALDEDFNRLNRREETIDRLRRRIDPDDGQAPGIRIGTFVLKPALSETFNHERQKN CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHC GGSSESRSFMETGLKGSLTSDWSRHQLSVTGEGVIQDNISGEGEEEPRADVNAELRLDLG CCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEECC EETTARLRAGYSFEREDANDPNAIADAETQSGVDTYRLGAAIERDLGLIRGAVGVDFERR CCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC TYGNVDLDDGRTLSQEDRDRNLATLTARIGYELSPALIPFLEASAGKSVYDLRRDTFGFE CCCCCCCCCCCCCCCHHCCCCEEEEEEHHCCCCCCHHHHHHHHCCCCHHHHHHHHHCCHH RSYESYAGRAGMEVDFGEKLNGELALGYETFRFDDRRLEDLGGVSLDGRVNWSPHRGTDV HHHHHHCCCCCCEECCCCCCCCCEEEEEEEEECCCHHHHHCCCEEECCEECCCCCCCHHH LFGMLTYVDPSTTPGEAGSINYELTNVVTQQLRSTLVGRLSNSVTWRDFPSDATASDETA HHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCH WRAGAGLTWDMSRYLALTGDLSYERTNRDQGASSDTTRVGVGLTLRR HHCCCCCEEECHHEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MVPNISRSTMSGALRVKSPAWLLAGCAFLTCAPASAQSLAPADQPIPAIIDPQATGAVAG CCCCCCCHHHCCEEEECCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEECCCCCCCEEC TDLSPALDEDFNRLNRREETIDRLRRRIDPDDGQAPGIRIGTFVLKPALSETFNHERQKN CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHC GGSSESRSFMETGLKGSLTSDWSRHQLSVTGEGVIQDNISGEGEEEPRADVNAELRLDLG CCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEECC EETTARLRAGYSFEREDANDPNAIADAETQSGVDTYRLGAAIERDLGLIRGAVGVDFERR CCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC TYGNVDLDDGRTLSQEDRDRNLATLTARIGYELSPALIPFLEASAGKSVYDLRRDTFGFE CCCCCCCCCCCCCCCHHCCCCEEEEEEHHCCCCCCHHHHHHHHCCCCHHHHHHHHHCCHH RSYESYAGRAGMEVDFGEKLNGELALGYETFRFDDRRLEDLGGVSLDGRVNWSPHRGTDV HHHHHHCCCCCCEECCCCCCCCCEEEEEEEEECCCHHHHHCCCEEECCEECCCCCCCHHH LFGMLTYVDPSTTPGEAGSINYELTNVVTQQLRSTLVGRLSNSVTWRDFPSDATASDETA HHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCH WRAGAGLTWDMSRYLALTGDLSYERTNRDQGASSDTTRVGVGLTLRR HHCCCCCEEECHHEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA