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The map label for this gene is ybbJ [H]

Identifier: 150397903

GI number: 150397903

Start: 2813494

End: 2813949

Strand: Direct

Name: ybbJ [H]

Synonym: Smed_2705

Alternate gene names: 150397903

Gene position: 2813494-2813949 (Clockwise)

Preceding gene: 150397902

Following gene: 150397904

Centisome position: 74.39

GC content: 67.54

Gene sequence:

>456_bases
ATGATCGAGCGCATCGTCCTTGAGCTCGGTCCCTGGAGCTGGTGGGTACTCGGCCTCCTGCTCCTTGCCGCGGAGCTGGC
CCTGCCCGGCGTATTCCTCGTCTGGATCGCGCTTGCCGCCCTCGTCACTGGAGCTCTCTCGCTGTTCTTCTGGGAGGCGC
CGTTCTGGAGCTGGCAGCTTCAGTTCGTCGCCTTCGCGCTGCTTTCGGTCGCTTCCGTCCTCATCGGGCGGCGTTTCGTC
TCCTCATCTGCCGAAAGCGACGAGCCGCTGCTCAACAGGCGCGGGGAAAGCCTCGTCGGGCGTACGGCCGTGCTCGAGCA
GCCGATCGCGGAAGGCCGCGGACGCGTCCGGCTCGACGACACGACCTGGGCCGTCGAGGGGCCCGATCTTCCGGTAGGGA
CGCGTGTCCGCATCGTTGCGAGCAGCGGGCGGCATCTGACCGTCGAACCGGTCTGA

Upstream 100 bases:

>100_bases
GGGAAGTTTTCGGGGACGCCGCGGCGGCGTCCCAGCGTCAACGGCAGTCCACGCCCAGAACCGGCCCCTCCCTTCCCCTG
GAAAAGCCGGAGGATCGCTC

Downstream 100 bases:

>100_bases
GCACGCCGGAAAAACCGCGTTCCGAGCGGCTGTACAGAAACGATTGATTAACCACGCGCCTTTACGATTGCGAAACGATT
GCAATCAAATTTGCGGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MIERIVLELGPWSWWVLGLLLLAAELALPGVFLVWIALAALVTGALSLFFWEAPFWSWQLQFVAFALLSVASVLIGRRFV
SSSAESDEPLLNRRGESLVGRTAVLEQPIAEGRGRVRLDDTTWAVEGPDLPVGTRVRIVASSGRHLTVEPV

Sequences:

>Translated_151_residues
MIERIVLELGPWSWWVLGLLLLAAELALPGVFLVWIALAALVTGALSLFFWEAPFWSWQLQFVAFALLSVASVLIGRRFV
SSSAESDEPLLNRRGESLVGRTAVLEQPIAEGRGRVRLDDTTWAVEGPDLPVGTRVRIVASSGRHLTVEPV
>Mature_151_residues
MIERIVLELGPWSWWVLGLLLLAAELALPGVFLVWIALAALVTGALSLFFWEAPFWSWQLQFVAFALLSVASVLIGRRFV
SSSAESDEPLLNRRGESLVGRTAVLEQPIAEGRGRVRLDDTTWAVEGPDLPVGTRVRIVASSGRHLTVEPV

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=124, Percent_Identity=34.6774193548387, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 16603; Mature: 16603

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERIVLELGPWSWWVLGLLLLAAELALPGVFLVWIALAALVTGALSLFFWEAPFWSWQL
CCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QFVAFALLSVASVLIGRRFVSSSAESDEPLLNRRGESLVGRTAVLEQPIAEGRGRVRLDD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECC
TTWAVEGPDLPVGTRVRIVASSGRHLTVEPV
CEEEECCCCCCCCCEEEEEECCCCEEEEECC
>Mature Secondary Structure
MIERIVLELGPWSWWVLGLLLLAAELALPGVFLVWIALAALVTGALSLFFWEAPFWSWQL
CCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QFVAFALLSVASVLIGRRFVSSSAESDEPLLNRRGESLVGRTAVLEQPIAEGRGRVRLDD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECC
TTWAVEGPDLPVGTRVRIVASSGRHLTVEPV
CEEEECCCCCCCCCEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]