Click here to switch to the map view.

The map label for this gene is ycbK [H]

Identifier: 150397880

GI number: 150397880

Start: 2783154

End: 2784980

Strand: Reverse

Name: ycbK [H]

Synonym: Smed_2682

Alternate gene names: 150397880

Gene position: 2784980-2783154 (Counterclockwise)

Preceding gene: 150397881

Following gene: 150397879

Centisome position: 73.64

GC content: 64.97

Gene sequence:

>1827_bases
ATGCCAAATTTGTTCGGTTTGGAGGAACCAGTCGGTTCCTTTGCGCGCAGAGTCTGCTCGGCGGTCGCTCGAAAGGCGCC
GCAGGTCCTGGCGTCTATCGCGCTGGTATGCTCCCTTGTCACGCCTGGCATGGCGCCTCCGGTCGAGGCCGCCGGACAGA
CACGCACCCTCAAGCTGTATTTCATCCACACCAAGGAAAAGGCGCAGATCACCTTCAAGCGCAATGGTCGCTACGATCAG
AAGGGGCTGCAGCAGATAAACCGTTTTCTTCGCGACTGGCGGCGGAACGAGCCGACAAAAATGGATCCGCGCCTGCTTGA
TCTCGTCTGGGAAGTTTATCAGAAGAGCGGTTCGCGCGATTATATCCACGTCGTTTCGGCTTATCGTTCACCGGCGACGA
ACGGCATGTTGAGGTCACGCTCCAAGGGCGTCGCCAAGAAGAGCCAGCATATGCTCGGCAAGGCGATGGACTTCTATATT
CCGGATGTGAGGCTGAAGTCGCTGCGCGAGATCGGCATGAAGTTCCAGGTCGGCGGCGTCGGCTACTATCCGACCTCCGG
TTCGCCCTTCGTGCACATGGATGTTGGCGGGGTACGCGCCTGGCCGCGCATGACGCGCAACGAGCTTGCGCGTCTCTTCC
CCGATGGCGAGACCATGCACATCCCCTCCGACGGCAAGCCGCTGCCCGGCTATAATCAGGCCGTGGCCGATTATAAGCGC
CGCGTCGGCGCGTCTGCGATCCAGGTCGCGGGCGGCGGTGCCACGGGGTCAGGCGATACCGGAAAGCGCCGCAACCTCTT
TGCCGCGCTCTTTGGCGGAGGCGGCGACGAGGATGAAGAACCCGCGGCGATTGTCGCCGGTGGCGATGAAGAGGCTCCGG
CCAAGGTCCGTACCGCGTCCGCGCCGGCGGCCCAGGATGCTCTCCCGGGCGTTGCAGGGTCTGCGGCGGGTTCGCAGCAG
CAGGACATCGACGCACCAGTGCCTGCCGTGCGACCGGCCTTCAAGGAAACACCGGCTGATGGCGGCGTCGCTGTAGCGCT
CGTCGCTCCGGAGAAGAACAGCGCTCAGGAGGCGTTGGCTGCGGCCATGCCGCAGACGCCGGCCGTGCCATCGGAATTTG
CGGATCTGAGCACCCTCAAGGTTCCTGTCCCGCAGATGCTCGACCGGCGCGACATGAACGCTCTGATCGCCAACGAGACG
CTCGTCGCCGCGGCCGGCGGTGAGGCCGAGGAGTTCGGGTTCGTGCCGGTGCCGGGAATGCGCCCGGCAGGTGAGGAGGC
GCTTGCGGCCGTTGCTCAGGCGGACGTCACCGTTCCTCTCTTTGAAGACCGGCCCGCGCTCGCTTCCGCGGCACAGGCGC
CGAACGCAACCGGTGCGACCGGGTCACGCGTGGCTCTCGCCGCGCCGACAACCGAGAACCGGGCGCCTGCAATTCCTCCT
GCGATCGAGCTTGCCGCCTATGCGCCGCAACCGGGTTCGGCTGCGCGTGAGGCGATCTTCGACAGTGTCTTCGACCCAGA
CGCGGATGCCCCCACGAAAGGCGCCCGCCCCAAGAGGCAGGATGCCGAGGCGAAAAGCCGGTCTTCCGTCCGCACCGAGC
CGAAGCTGACGCAGAAGATCATTTCCGAGTGGGCGCTCTCGGCGGGTCGTGTGGCGACCCTGTCCAAGCCGGTCAAGGCG
CCGCGCTTCGTCAGCAAGTCGCTCCGCGTCGCTCCGACGACCGTTTACGCGGCCGGCTTCACCAGCAATAACGGCGCGGT
CGATACGGCGCGCTTCAGCGGCAGTGCCGTCAACTTCATGGAAGTCAAGAAGTTCGACACCAACTGA

Upstream 100 bases:

>100_bases
ATAAGGGGCGGTGAACACTGTGGCATAATTGCCATGCTGTCACCTTATTTGACAGTCATCTGAGACAGCAAAGCACGGTT
GTCCGTCGGACGGGGATTGA

Downstream 100 bases:

>100_bases
GTCTTGCCGCCACGCATAAGCAAGAGCGTTTCAGTGTTCCGCTGAAACGCTCTTTTGTTTTCGAAGCTTCGAACTTCGGA
TGAGAAGCCGCTGCCCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 607

Protein sequence:

>608_residues
MPNLFGLEEPVGSFARRVCSAVARKAPQVLASIALVCSLVTPGMAPPVEAAGQTRTLKLYFIHTKEKAQITFKRNGRYDQ
KGLQQINRFLRDWRRNEPTKMDPRLLDLVWEVYQKSGSRDYIHVVSAYRSPATNGMLRSRSKGVAKKSQHMLGKAMDFYI
PDVRLKSLREIGMKFQVGGVGYYPTSGSPFVHMDVGGVRAWPRMTRNELARLFPDGETMHIPSDGKPLPGYNQAVADYKR
RVGASAIQVAGGGATGSGDTGKRRNLFAALFGGGGDEDEEPAAIVAGGDEEAPAKVRTASAPAAQDALPGVAGSAAGSQQ
QDIDAPVPAVRPAFKETPADGGVAVALVAPEKNSAQEALAAAMPQTPAVPSEFADLSTLKVPVPQMLDRRDMNALIANET
LVAAAGGEAEEFGFVPVPGMRPAGEEALAAVAQADVTVPLFEDRPALASAAQAPNATGATGSRVALAAPTTENRAPAIPP
AIELAAYAPQPGSAAREAIFDSVFDPDADAPTKGARPKRQDAEAKSRSSVRTEPKLTQKIISEWALSAGRVATLSKPVKA
PRFVSKSLRVAPTTVYAAGFTSNNGAVDTARFSGSAVNFMEVKKFDTN

Sequences:

>Translated_608_residues
MPNLFGLEEPVGSFARRVCSAVARKAPQVLASIALVCSLVTPGMAPPVEAAGQTRTLKLYFIHTKEKAQITFKRNGRYDQ
KGLQQINRFLRDWRRNEPTKMDPRLLDLVWEVYQKSGSRDYIHVVSAYRSPATNGMLRSRSKGVAKKSQHMLGKAMDFYI
PDVRLKSLREIGMKFQVGGVGYYPTSGSPFVHMDVGGVRAWPRMTRNELARLFPDGETMHIPSDGKPLPGYNQAVADYKR
RVGASAIQVAGGGATGSGDTGKRRNLFAALFGGGGDEDEEPAAIVAGGDEEAPAKVRTASAPAAQDALPGVAGSAAGSQQ
QDIDAPVPAVRPAFKETPADGGVAVALVAPEKNSAQEALAAAMPQTPAVPSEFADLSTLKVPVPQMLDRRDMNALIANET
LVAAAGGEAEEFGFVPVPGMRPAGEEALAAVAQADVTVPLFEDRPALASAAQAPNATGATGSRVALAAPTTENRAPAIPP
AIELAAYAPQPGSAAREAIFDSVFDPDADAPTKGARPKRQDAEAKSRSSVRTEPKLTQKIISEWALSAGRVATLSKPVKA
PRFVSKSLRVAPTTVYAAGFTSNNGAVDTARFSGSAVNFMEVKKFDTN
>Mature_607_residues
PNLFGLEEPVGSFARRVCSAVARKAPQVLASIALVCSLVTPGMAPPVEAAGQTRTLKLYFIHTKEKAQITFKRNGRYDQK
GLQQINRFLRDWRRNEPTKMDPRLLDLVWEVYQKSGSRDYIHVVSAYRSPATNGMLRSRSKGVAKKSQHMLGKAMDFYIP
DVRLKSLREIGMKFQVGGVGYYPTSGSPFVHMDVGGVRAWPRMTRNELARLFPDGETMHIPSDGKPLPGYNQAVADYKRR
VGASAIQVAGGGATGSGDTGKRRNLFAALFGGGGDEDEEPAAIVAGGDEEAPAKVRTASAPAAQDALPGVAGSAAGSQQQ
DIDAPVPAVRPAFKETPADGGVAVALVAPEKNSAQEALAAAMPQTPAVPSEFADLSTLKVPVPQMLDRRDMNALIANETL
VAAAGGEAEEFGFVPVPGMRPAGEEALAAVAQADVTVPLFEDRPALASAAQAPNATGATGSRVALAAPTTENRAPAIPPA
IELAAYAPQPGSAAREAIFDSVFDPDADAPTKGARPKRQDAEAKSRSSVRTEPKLTQKIISEWALSAGRVATLSKPVKAP
RFVSKSLRVAPTTVYAAGFTSNNGAVDTARFSGSAVNFMEVKKFDTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=179, Percent_Identity=38.5474860335196, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 64270; Mature: 64139

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLFGLEEPVGSFARRVCSAVARKAPQVLASIALVCSLVTPGMAPPVEAAGQTRTLKLY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEE
FIHTKEKAQITFKRNGRYDQKGLQQINRFLRDWRRNEPTKMDPRLLDLVWEVYQKSGSRD
EEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
YIHVVSAYRSPATNGMLRSRSKGVAKKSQHMLGKAMDFYIPDVRLKSLREIGMKFQVGGV
EEEHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCE
GYYPTSGSPFVHMDVGGVRAWPRMTRNELARLFPDGETMHIPSDGKPLPGYNQAVADYKR
EECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHH
RVGASAIQVAGGGATGSGDTGKRRNLFAALFGGGGDEDEEPAAIVAGGDEEAPAKVRTAS
HCCCCEEEEECCCCCCCCCCCCHHCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECC
APAAQDALPGVAGSAAGSQQQDIDAPVPAVRPAFKETPADGGVAVALVAPEKNSAQEALA
CCCHHHHCCCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCCCCEEEEEECCCCCCHHHHHH
AAMPQTPAVPSEFADLSTLKVPVPQMLDRRDMNALIANETLVAAAGGEAEEFGFVPVPGM
HHCCCCCCCCHHHCCCCEEECCHHHHHCHHCCHHHHCCCEEEEECCCCHHHCCCCCCCCC
RPAGEEALAAVAQADVTVPLFEDRPALASAAQAPNATGATGSRVALAAPTTENRAPAIPP
CCCCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC
AIELAAYAPQPGSAAREAIFDSVFDPDADAPTKGARPKRQDAEAKSRSSVRTEPKLTQKI
HHHHEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
ISEWALSAGRVATLSKPVKAPRFVSKSLRVAPTTVYAAGFTSNNGAVDTARFSGSAVNFM
HHHHHHCCCCEEECCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEE
EVKKFDTN
EEEECCCC
>Mature Secondary Structure 
PNLFGLEEPVGSFARRVCSAVARKAPQVLASIALVCSLVTPGMAPPVEAAGQTRTLKLY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEE
FIHTKEKAQITFKRNGRYDQKGLQQINRFLRDWRRNEPTKMDPRLLDLVWEVYQKSGSRD
EEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
YIHVVSAYRSPATNGMLRSRSKGVAKKSQHMLGKAMDFYIPDVRLKSLREIGMKFQVGGV
EEEHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCE
GYYPTSGSPFVHMDVGGVRAWPRMTRNELARLFPDGETMHIPSDGKPLPGYNQAVADYKR
EECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHH
RVGASAIQVAGGGATGSGDTGKRRNLFAALFGGGGDEDEEPAAIVAGGDEEAPAKVRTAS
HCCCCEEEEECCCCCCCCCCCCHHCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECC
APAAQDALPGVAGSAAGSQQQDIDAPVPAVRPAFKETPADGGVAVALVAPEKNSAQEALA
CCCHHHHCCCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCCCCEEEEEECCCCCCHHHHHH
AAMPQTPAVPSEFADLSTLKVPVPQMLDRRDMNALIANETLVAAAGGEAEEFGFVPVPGM
HHCCCCCCCCHHHCCCCEEECCHHHHHCHHCCHHHHCCCEEEEECCCCHHHCCCCCCCCC
RPAGEEALAAVAQADVTVPLFEDRPALASAAQAPNATGATGSRVALAAPTTENRAPAIPP
CCCCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC
AIELAAYAPQPGSAAREAIFDSVFDPDADAPTKGARPKRQDAEAKSRSSVRTEPKLTQKI
HHHHEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
ISEWALSAGRVATLSKPVKAPRFVSKSLRVAPTTVYAAGFTSNNGAVDTARFSGSAVNFM
HHHHHHCCCCEEECCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEE
EVKKFDTN
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]