| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is cya3 [H]
Identifier: 150397854
GI number: 150397854
Start: 2760546
End: 2762450
Strand: Reverse
Name: cya3 [H]
Synonym: Smed_2656
Alternate gene names: 150397854
Gene position: 2762450-2760546 (Counterclockwise)
Preceding gene: 150397855
Following gene: 150397847
Centisome position: 73.04
GC content: 61.52
Gene sequence:
>1905_bases GTGCTCGGCTACAAGATGAAATTCGAGGCTCTGTTGGAACGCCGTCTCACTGCCATTCTCGCCGCCGATGTGGTGGGCTA TAGCCGCCTGATGGGTGCGGATGAGGCCGGCACGCTCGCGGCGCTGAAGCGGCATCGACGCGAGTTGCTGGAGCCGAAGA TCGCCGAGCACAAGGGCCGCATCGTCAAGCTGGCGGGAGACAGCTTCCTGGTAGAATTTTCGAGCGTTGTGAACGCGGTC GCCTGCGCCGTCGCAATCCAGCGCGGCATGGTTTCCTGCAACGAAGGTCTGCCGAAAAGCAGGCGTATCGAACTCAGGAT CGGCATCCATCTCGGCGACGTGATCGTTGAGGACGGCGACATCTTCGGCGATGGCGTCAACGTCGCTGCGCGGCTCGAAG GGCTTGCCGACCCGTCCGGCATCGCCGTTTCGGCCTCCGTGCGCGACCATGTCGGCTCGAGACTCGATGTCGGCTTCGTC GACAAGGGCGAATACAGTCTGAAGAACATCGCGCCGACAATTCGCGTCTACACGGTTTCTCTCGGCGCGCATCCGGTCGC AAAGGGTTCGGAACCGGCCGGTGTCGTTGACCGTGGCTACGAATTGTCCATCGCCGTCCTGCCCTTCACCAATATGAGCC ATGATCCCGAGCAGGAATACTTCTCCGACGGCATCACCGAGGACGTCATCACCGATCTTTCGAAGGTTGCGCGGCTGCAC GTCGTCGCCCGCAACACCGTCTTCACCTACAAGGGCAAGGCAGTGAAGGTGAAACAGATCGCCCACGAACTCGGCGTGCG CTTCATTCTCGAAGGTAGCGTACGCAAGGCGGGCGAACGCGTGCGCATCACCGGCCAGCTGATCGACGCCCAGACCGGCG GGCATCTGTGGGCGGACCGTTACGATCGCGACCTGACCGACATTTTCGCGATCCAGGACGAGATCACGCACGCGATCGTC AACCAGCTCAAGATAAAGCTCCTGCCGGAGGAAAAGAAGGCGATCGAAAGCGATCCCACGACTTCCGTCGAGGCCTATAC CTACTATCTCCGGGGACGCCAGTTCTCACATACCTGGACAAAGCCCTATCTGCTTCTCGCCCGCCGGATGTTCCTCAAGG CTGTCGAGCTCGATCCGAACTACGCTCGTGCCTATGCGGGAATCGCCGAATGCGAATGTGCGATCAGGGACTGGCACGAA AAGGAGTTCCCGCTGAAGAGCATTCTCGACATGAGCGCCAAGGCGCTCGCGCTGGATCCGAATCTGGCGGAAGCGCACGC CTCGCGCGGGCTTGCATTGAACCACGACGGCCAAACGGAGGAAGCGAGCCGTGAGTTCCGTCAGGCTCTCGCGCTGGATC CTTCGCTCTATGAGGCAAATCTCTATTATGGCCGTTTCCTGTTCGCGCAGGGTCGATTCCAGGAAGCAATCGGCTTTTTC GAGCGCGCGGCGGAGATCAGGTCGGACGACTATTTTTCGCCGATCCATCTGATGGGTTGCCATCTCTCGCTCGGTAGGGA AGCCGAGCGCCAGCGTTGGGCACGGATCGGCATCGAGCGGGCGACAAGAGCGCTGGAGCGGAATCCGGAAAATGCCAGTC CGGCCCATCGCGGCGCATTGGCGCTCGCGCATATGGGTGAGGCCGAACGCGCGAAGGAATGGGTTTCCCGAGCACTTGCG ACCGATCCCGACGATGTGGTCGCGCAGTACAATGCAGCATGCGTCTATGCGCTCCTCGGTGAGGGCGAGCGTGCGCTGGA GCTGCTGGAGACAGTGGTGCCGCAGAGCTCCAGCTATCATGTCCTATGGTTCAATCAGGACCCGGACCTGGATCTCATAC GCGACGATCCCCGCTTCCGCGCGCTCCTCGACGCGCTCGGAGACTGCAACGCCGCAGGGCCCTGA
Upstream 100 bases:
>100_bases TTCCTTTAGAAACAGCACCTTGCGGAACGGCCACTTATCTTCACGGCCAAAACGACGCGAGTCTCCGCACGACATTATGG CAGGAAAAGGTTAAATTACC
Downstream 100 bases:
>100_bases CGAGCGACCGCCTCTGCGCGTCCGAAGGACTCCCGGGGTGCTGCGAACATCAGACCTCGATCACGCCGCGCATCGCCGTC ACGCAGTCGCCCGAGATGCT
Product: adenylyl cyclase class-3/4/guanylyl cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MLGYKMKFEALLERRLTAILAADVVGYSRLMGADEAGTLAALKRHRRELLEPKIAEHKGRIVKLAGDSFLVEFSSVVNAV ACAVAIQRGMVSCNEGLPKSRRIELRIGIHLGDVIVEDGDIFGDGVNVAARLEGLADPSGIAVSASVRDHVGSRLDVGFV DKGEYSLKNIAPTIRVYTVSLGAHPVAKGSEPAGVVDRGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLH VVARNTVFTYKGKAVKVKQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADRYDRDLTDIFAIQDEITHAIV NQLKIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWTKPYLLLARRMFLKAVELDPNYARAYAGIAECECAIRDWHE KEFPLKSILDMSAKALALDPNLAEAHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFF ERAAEIRSDDYFSPIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHRGALALAHMGEAERAKEWVSRALA TDPDDVVAQYNAACVYALLGEGERALELLETVVPQSSSYHVLWFNQDPDLDLIRDDPRFRALLDALGDCNAAGP
Sequences:
>Translated_634_residues MLGYKMKFEALLERRLTAILAADVVGYSRLMGADEAGTLAALKRHRRELLEPKIAEHKGRIVKLAGDSFLVEFSSVVNAV ACAVAIQRGMVSCNEGLPKSRRIELRIGIHLGDVIVEDGDIFGDGVNVAARLEGLADPSGIAVSASVRDHVGSRLDVGFV DKGEYSLKNIAPTIRVYTVSLGAHPVAKGSEPAGVVDRGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLH VVARNTVFTYKGKAVKVKQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADRYDRDLTDIFAIQDEITHAIV NQLKIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWTKPYLLLARRMFLKAVELDPNYARAYAGIAECECAIRDWHE KEFPLKSILDMSAKALALDPNLAEAHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFF ERAAEIRSDDYFSPIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHRGALALAHMGEAERAKEWVSRALA TDPDDVVAQYNAACVYALLGEGERALELLETVVPQSSSYHVLWFNQDPDLDLIRDDPRFRALLDALGDCNAAGP >Mature_634_residues MLGYKMKFEALLERRLTAILAADVVGYSRLMGADEAGTLAALKRHRRELLEPKIAEHKGRIVKLAGDSFLVEFSSVVNAV ACAVAIQRGMVSCNEGLPKSRRIELRIGIHLGDVIVEDGDIFGDGVNVAARLEGLADPSGIAVSASVRDHVGSRLDVGFV DKGEYSLKNIAPTIRVYTVSLGAHPVAKGSEPAGVVDRGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLH VVARNTVFTYKGKAVKVKQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADRYDRDLTDIFAIQDEITHAIV NQLKIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWTKPYLLLARRMFLKAVELDPNYARAYAGIAECECAIRDWHE KEFPLKSILDMSAKALALDPNLAEAHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFF ERAAEIRSDDYFSPIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHRGALALAHMGEAERAKEWVSRALA TDPDDVVAQYNAACVYALLGEGERALELLETVVPQSSSYHVLWFNQDPDLDLIRDDPRFRALLDALGDCNAAGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 70220; Mature: 70220
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGYKMKFEALLERRLTAILAADVVGYSRLMGADEAGTLAALKRHRRELLEPKIAEHKGR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCC IVKLAGDSFLVEFSSVVNAVACAVAIQRGMVSCNEGLPKSRRIELRIGIHLGDVIVEDGD EEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEEEECCEEEECCC IFGDGVNVAARLEGLADPSGIAVSASVRDHVGSRLDVGFVDKGEYSLKNIAPTIRVYTVS EECCCCCHHHHHCCCCCCCCEEEEEEHHHHCCCCCCCCEECCCCCCHHHCCCEEEEEEEE LGAHPVAKGSEPAGVVDRGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLH ECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH VVARNTVFTYKGKAVKVKQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADR EEEECEEEEECCCEEEHHHHHHHCCCEEEEECCHHCCCCEEEEEEEEEECCCCCCEEHHH YDRDLTDIFAIQDEITHAIVNQLKIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWT HCCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCC KPYLLLARRMFLKAVELDPNYARAYAGIAECECAIRDWHEKEFPLKSILDMSAKALALDP HHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEECC NLAEAHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFF CHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCEECCEEEEEEEEECCHHHHHHHHH ERAAEIRSDDYFSPIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHRGAL HHHHHHCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ALAHMGEAERAKEWVSRALATDPDDVVAQYNAACVYALLGEGERALELLETVVPQSSSYH HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEE VLWFNQDPDLDLIRDDPRFRALLDALGDCNAAGP EEEECCCCCCCEECCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLGYKMKFEALLERRLTAILAADVVGYSRLMGADEAGTLAALKRHRRELLEPKIAEHKGR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCC IVKLAGDSFLVEFSSVVNAVACAVAIQRGMVSCNEGLPKSRRIELRIGIHLGDVIVEDGD EEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEEEECCEEEECCC IFGDGVNVAARLEGLADPSGIAVSASVRDHVGSRLDVGFVDKGEYSLKNIAPTIRVYTVS EECCCCCHHHHHCCCCCCCCEEEEEEHHHHCCCCCCCCEECCCCCCHHHCCCEEEEEEEE LGAHPVAKGSEPAGVVDRGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLH ECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHH VVARNTVFTYKGKAVKVKQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADR EEEECEEEEECCCEEEHHHHHHHCCCEEEEECCHHCCCCEEEEEEEEEECCCCCCEEHHH YDRDLTDIFAIQDEITHAIVNQLKIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWT HCCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCC KPYLLLARRMFLKAVELDPNYARAYAGIAECECAIRDWHEKEFPLKSILDMSAKALALDP HHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEECC NLAEAHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFF CHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCEECCEEEEEEEEECCHHHHHHHHH ERAAEIRSDDYFSPIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHRGAL HHHHHHCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ALAHMGEAERAKEWVSRALATDPDDVVAQYNAACVYALLGEGERALELLETVVPQSSSYH HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEE VLWFNQDPDLDLIRDDPRFRALLDALGDCNAAGP EEEECCCCCCCEECCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]