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The map label for this gene is ymdB [H]

Identifier: 150397843

GI number: 150397843

Start: 2748939

End: 2749763

Strand: Reverse

Name: ymdB [H]

Synonym: Smed_2645

Alternate gene names: 150397843

Gene position: 2749763-2748939 (Counterclockwise)

Preceding gene: 150397844

Following gene: 150397842

Centisome position: 72.71

GC content: 61.94

Gene sequence:

>825_bases
ATGCGTCTTCTGTTTCTGGGGGATATGGTTGGCAAGACGGGCCGCACCGCCGTCTGGGAGCGCCTCCCGGGACTGGTGAG
CGACCTCAAGCTGGATTTCGTCATCGTCAACGGCGAGAACGCTGCCGGCGGATTCGGGATTACCGAAGACATTTTCCTCG
AGACGATCAGCGCCGGAGCCGACGTCGTGACGACCGGCAATCACGTCTGGGATCAAAAGGAGGCGGTCGTCTTTTGCGAG
CGTCACGATCAGTTTCTGCGGCCCGCGAACTATCCTGCGGGCACCCCGGGCCGGGGTTCCAATCTTTTCTTCGCGCGAAA
CGGCGCGCGGGTGCTGGTCGCCAACGTCATGGGGCGGGTCTTCATGCATCCGGAACTCGATGATCCCTTCAAAACGGCCG
AGGCTATCCTTGCGGCCTGTCCGCTCGGCGAGCAGGCTGATGCGATCGTCTTCGATTTTCATGCGGAGGCGACGAGCGAA
AAGCAGTGTTTCGGCCACTTCGTCGACGGGCGTGCCAGCCTCGTCGTCGGCACCCATACCCATGTGCCCACTGCGGACCA
CCAGATCCTCAACGGCGGCACCGGGTATATGAGCGATGCCGGCATGTGCGGCGACTACGACTCTTCGTTGGGGATGGACA
AGGAAGAGCCGCTCAACCGCTTTATCTCGAAGATGCCCAAGGGCCGGTTCGAAGCGGCATCGGGTCCGGCGACCATCTCC
GGCCTCGGCATCGAGATTTCCGACCGGACGGGATTGGCCGAGAAGATCGCGCCGCTCAGAATCGGCCCGAGATTGGCCGA
AACGATCCCGCAATTCTGGGTTTAA

Upstream 100 bases:

>100_bases
CGCGCGGACTCCGTCGCGTCCTCGAATTGAATCATTGGAACCGACCACGTGCGTGATTTGGCGTCATCCAGATTGTCGTG
GTCCAAACGGGATTGAACGT

Downstream 100 bases:

>100_bases
GGGGCAGAACTTGCTCCTGCTCCGCGTTCGTACGGCCGTTAGCGGTCTCTGCCGACTCGTCTTTTTTCAAGGGTGACAGA
CCTGACAAATGGTGGCAGGT

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRLLFLGDMVGKTGRTAVWERLPGLVSDLKLDFVIVNGENAAGGFGITEDIFLETISAGADVVTTGNHVWDQKEAVVFCE
RHDQFLRPANYPAGTPGRGSNLFFARNGARVLVANVMGRVFMHPELDDPFKTAEAILAACPLGEQADAIVFDFHAEATSE
KQCFGHFVDGRASLVVGTHTHVPTADHQILNGGTGYMSDAGMCGDYDSSLGMDKEEPLNRFISKMPKGRFEAASGPATIS
GLGIEISDRTGLAEKIAPLRIGPRLAETIPQFWV

Sequences:

>Translated_274_residues
MRLLFLGDMVGKTGRTAVWERLPGLVSDLKLDFVIVNGENAAGGFGITEDIFLETISAGADVVTTGNHVWDQKEAVVFCE
RHDQFLRPANYPAGTPGRGSNLFFARNGARVLVANVMGRVFMHPELDDPFKTAEAILAACPLGEQADAIVFDFHAEATSE
KQCFGHFVDGRASLVVGTHTHVPTADHQILNGGTGYMSDAGMCGDYDSSLGMDKEEPLNRFISKMPKGRFEAASGPATIS
GLGIEISDRTGLAEKIAPLRIGPRLAETIPQFWV
>Mature_274_residues
MRLLFLGDMVGKTGRTAVWERLPGLVSDLKLDFVIVNGENAAGGFGITEDIFLETISAGADVVTTGNHVWDQKEAVVFCE
RHDQFLRPANYPAGTPGRGSNLFFARNGARVLVANVMGRVFMHPELDDPFKTAEAILAACPLGEQADAIVFDFHAEATSE
KQCFGHFVDGRASLVVGTHTHVPTADHQILNGGTGYMSDAGMCGDYDSSLGMDKEEPLNRFISKMPKGRFEAASGPATIS
GLGIEISDRTGLAEKIAPLRIGPRLAETIPQFWV

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29524; Mature: 29524

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLFLGDMVGKTGRTAVWERLPGLVSDLKLDFVIVNGENAAGGFGITEDIFLETISAGA
CEEEEEEHHHCCCCCHHHHHHCCHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
DVVTTGNHVWDQKEAVVFCERHDQFLRPANYPAGTPGRGSNLFFARNGARVLVANVMGRV
CEEECCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHH
FMHPELDDPFKTAEAILAACPLGEQADAIVFDFHAEATSEKQCFGHFVDGRASLVVGTHT
EECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCC
HVPTADHQILNGGTGYMSDAGMCGDYDSSLGMDKEEPLNRFISKMPKGRFEAASGPATIS
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEE
GLGIEISDRTGLAEKIAPLRIGPRLAETIPQFWV
EEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRLLFLGDMVGKTGRTAVWERLPGLVSDLKLDFVIVNGENAAGGFGITEDIFLETISAGA
CEEEEEEHHHCCCCCHHHHHHCCHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
DVVTTGNHVWDQKEAVVFCERHDQFLRPANYPAGTPGRGSNLFFARNGARVLVANVMGRV
CEEECCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHH
FMHPELDDPFKTAEAILAACPLGEQADAIVFDFHAEATSEKQCFGHFVDGRASLVVGTHT
EECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCC
HVPTADHQILNGGTGYMSDAGMCGDYDSSLGMDKEEPLNRFISKMPKGRFEAASGPATIS
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEE
GLGIEISDRTGLAEKIAPLRIGPRLAETIPQFWV
EEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]